RNA–Protein interactions for RNA: ENST00000554289.1

LIN52-203, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 3

Gene LIN52, Length 271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-203ENST00000554289 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
LIN52-203ENST00000554289 WASHC2AQ641Q2 1341 aa12.19□□□□□ -0.46
LIN52-203ENST00000554289 TATP17735 454 aaPredicted RBP12.19□□□□□ -0.46
LIN52-203ENST00000554289 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
LIN52-203ENST00000554289 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
LIN52-203ENST00000554289 MEGF6O75095 1541 aa12.19□□□□□ -0.46
LIN52-203ENST00000554289 SLC15A2Q16348 729 aa12.18□□□□□ -0.46
LIN52-203ENST00000554289 PANK3Q9H999 370 aa12.18□□□□□ -0.46
LIN52-203ENST00000554289 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
LIN52-203ENST00000554289 CASZ1Q86V15 1759 aa12.18□□□□□ -0.46
LIN52-203ENST00000554289 NSD2O96028 1365 aa12.18□□□□□ -0.46
LIN52-203ENST00000554289 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
LIN52-203ENST00000554289 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
LIN52-203ENST00000554289 SLC27A3Q5K4L6 730 aa12.17□□□□□ -0.46
LIN52-203ENST00000554289 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
LIN52-203ENST00000554289 POLKQ9UBT6 870 aa12.17□□□□□ -0.46
LIN52-203ENST00000554289 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
LIN52-203ENST00000554289 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
LIN52-203ENST00000554289 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
LIN52-203ENST00000554289 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
LIN52-203ENST00000554289 LY75O60449 1722 aa12.15□□□□□ -0.46
LIN52-203ENST00000554289 SYTL4Q96C24 671 aaPredicted RBP12.15□□□□□ -0.46
LIN52-203ENST00000554289 PAPPAQ13219 1627 aa12.15□□□□□ -0.47
LIN52-203ENST00000554289 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
LIN52-203ENST00000554289 HMGB2P26583 209 aaKnown RBP12.14□□□□□ -0.47
LIN52-203ENST00000554289 EYA1Q99502 592 aa12.14□□□□□ -0.47
LIN52-203ENST00000554289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
LIN52-203ENST00000554289 PPP1R1BQ9UD71 204 aaPredicted RBP12.14□□□□□ -0.47
LIN52-203ENST00000554289 KNSTRNQ9Y448 316 aa12.14□□□□□ -0.47
LIN52-203ENST00000554289 LRRC4BQ9NT99 713 aa12.13□□□□□ -0.47
LIN52-203ENST00000554289 SPG7Q9UQ90 795 aa12.13□□□□□ -0.47
LIN52-203ENST00000554289 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
LIN52-203ENST00000554289 PLEKHG2Q9H7P9 1386 aa12.13□□□□□ -0.47
LIN52-203ENST00000554289 TNNT2P45379 298 aaPredicted RBP12.12□□□□□ -0.47
LIN52-203ENST00000554289 MORC1Q86VD1 984 aa12.12□□□□□ -0.47
LIN52-203ENST00000554289 ITGB4P16144 1822 aa12.11□□□□□ -0.47
LIN52-203ENST00000554289 CYP27B1O15528 508 aa12.11□□□□□ -0.47
LIN52-203ENST00000554289 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
LIN52-203ENST00000554289 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
LIN52-203ENST00000554289 PDGFDQ9GZP0 370 aaPredicted RBP12.11□□□□□ -0.47
LIN52-203ENST00000554289 MTFR1LQ9H019 292 aa12.11□□□□□ -0.47
LIN52-203ENST00000554289 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
LIN52-203ENST00000554289 ZBTB7AO95365 584 aa12.1□□□□□ -0.47
LIN52-203ENST00000554289 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
LIN52-203ENST00000554289 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
LIN52-203ENST00000554289 ZNF827Q17R98 1081 aa12.09□□□□□ -0.47
LIN52-203ENST00000554289 IFNL2Q8IZJ0 200 aa12.09□□□□□ -0.47
LIN52-203ENST00000554289 IGSF1Q8N6C5 1336 aa12.09□□□□□ -0.47
LIN52-203ENST00000554289 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
LIN52-203ENST00000554289 PTGER2P43116 358 aa12.08□□□□□ -0.48
LIN52-203ENST00000554289 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
LIN52-203ENST00000554289 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
LIN52-203ENST00000554289 CCNL1Q9UK58 526 aaPredicted RBP12.08□□□□□ -0.48
LIN52-203ENST00000554289 ATF5Q9Y2D1 282 aaPredicted RBP12.08□□□□□ -0.48
LIN52-203ENST00000554289 TOGARAM1Q9Y4F4 1720 aa12.08□□□□□ -0.48
LIN52-203ENST00000554289 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
LIN52-203ENST00000554289 TFCP2L1Q9NZI6 479 aa12.07□□□□□ -0.48
LIN52-203ENST00000554289 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
LIN52-203ENST00000554289 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
LIN52-203ENST00000554289 PER1O15534 1290 aaPredicted RBP12.06□□□□□ -0.48
LIN52-203ENST00000554289 PHKG2P15735 406 aa12.06□□□□□ -0.48
LIN52-203ENST00000554289 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
LIN52-203ENST00000554289 SGIP1Q9BQI5 828 aa12.06□□□□□ -0.48
LIN52-203ENST00000554289 C5P01031 1676 aa12.06□□□□□ -0.48
LIN52-203ENST00000554289 COL24A1Q17RW2 1714 aa12.06□□□□□ -0.48
LIN52-203ENST00000554289 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
LIN52-203ENST00000554289 HSP90AB1P08238 724 aaKnown RBP12.05□□□□□ -0.48
LIN52-203ENST00000554289 KCNQ4P56696 695 aa12.05□□□□□ -0.48
LIN52-203ENST00000554289 PLEKHO1Q53GL0 409 aaPredicted RBP12.05□□□□□ -0.48
LIN52-203ENST00000554289 PIGBQ92521 554 aa12.05□□□□□ -0.48
LIN52-203ENST00000554289 PNPLA7Q6ZV29 1317 aa12.05□□□□□ -0.48
LIN52-203ENST00000554289 FLAD1Q8NFF5 587 aa12.04□□□□□ -0.48
LIN52-203ENST00000554289 ARXQ96QS3 562 aa12.04□□□□□ -0.48
LIN52-203ENST00000554289 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
LIN52-203ENST00000554289 NPC1L1Q9UHC9 1359 aa12.04□□□□□ -0.48
LIN52-203ENST00000554289 ERVV-2B6SEH9 535 aa12.03□□□□□ -0.48
LIN52-203ENST00000554289 SYT17Q9BSW7 474 aa12.03□□□□□ -0.48
LIN52-203ENST00000554289 POLD1P28340 1107 aa12.02□□□□□ -0.49
LIN52-203ENST00000554289 IL13P35225 146 aa12.02□□□□□ -0.49
LIN52-203ENST00000554289 MTHFSP49914 203 aa12.02□□□□□ -0.49
LIN52-203ENST00000554289 DCAF5Q96JK2 942 aa12.02□□□□□ -0.49
LIN52-203ENST00000554289 FHDC1Q9C0D6 1143 aaPredicted RBP12.02□□□□□ -0.49
LIN52-203ENST00000554289 KDRP35968 1356 aa12.02□□□□□ -0.49
LIN52-203ENST00000554289 C4BP0C0L5 1744 aa12.01□□□□□ -0.49
LIN52-203ENST00000554289 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
LIN52-203ENST00000554289 COL23A1Q86Y22 540 aaPredicted RBP12.01□□□□□ -0.49
LIN52-203ENST00000554289 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
LIN52-203ENST00000554289 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
LIN52-203ENST00000554289 SIK1P57059 783 aa12□□□□□ -0.49
LIN52-203ENST00000554289 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
LIN52-203ENST00000554289 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
LIN52-203ENST00000554289 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
LIN52-203ENST00000554289 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
LIN52-203ENST00000554289 MSH5O43196 834 aa11.99□□□□□ -0.49
LIN52-203ENST00000554289 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
LIN52-203ENST00000554289 AK7Q96M32 723 aa11.99□□□□□ -0.49
LIN52-203ENST00000554289 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
LIN52-203ENST00000554289 ASAP1Q9ULH1 1129 aa11.99□□□□□ -0.49
LIN52-203ENST00000554289 UBR3Q6ZT12 1888 aa11.99□□□□□ -0.49
LIN52-203ENST00000554289 DIAPH1O60610 1272 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms