RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 DOT1LQ8TEK3 1739 aa9.68□□□□□ -0.86
MTHFD1-205ENST00000554057 EDC4Q6P2E9 1401 aaKnown RBP9.68□□□□□ -0.86
MTHFD1-205ENST00000554057 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
MTHFD1-205ENST00000554057 HNRNPUQ00839 825 aaKnown RBP eCLIP9.68□□□□□ -0.86
MTHFD1-205ENST00000554057 RBM19Q9Y4C8 960 aaKnown RBP9.68□□□□□ -0.86
MTHFD1-205ENST00000554057 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
MTHFD1-205ENST00000554057 A0A1W2PP64 1363 aa9.67□□□□□ -0.86
MTHFD1-205ENST00000554057 HDGFL2Q7Z4V5 671 aaPredicted RBP9.67□□□□□ -0.86
MTHFD1-205ENST00000554057 DDX54Q8TDD1 881 aaKnown RBP9.67□□□□□ -0.86
MTHFD1-205ENST00000554057 LTV1Q96GA3 475 aaPredicted RBP9.67□□□□□ -0.86
MTHFD1-205ENST00000554057 SLC12A5Q9H2X9 1139 aa9.67□□□□□ -0.86
MTHFD1-205ENST00000554057 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
MTHFD1-205ENST00000554057 PNPLA7Q6ZV29 1317 aa9.66□□□□□ -0.86
MTHFD1-205ENST00000554057 KCNQ4P56696 695 aa9.66□□□□□ -0.86
MTHFD1-205ENST00000554057 GPR162Q16538 588 aa9.66□□□□□ -0.86
MTHFD1-205ENST00000554057 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
MTHFD1-205ENST00000554057 CARD11Q9BXL7 1154 aa9.66□□□□□ -0.86
MTHFD1-205ENST00000554057 PRKRIP1Q9H875 184 aaPredicted RBP9.66□□□□□ -0.86
MTHFD1-205ENST00000554057 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
MTHFD1-205ENST00000554057 COL24A1Q17RW2 1714 aa9.65□□□□□ -0.86
MTHFD1-205ENST00000554057 ZBED9Q6R2W3 1325 aa9.65□□□□□ -0.86
MTHFD1-205ENST00000554057 FANCIQ9NVI1 1328 aa9.65□□□□□ -0.86
MTHFD1-205ENST00000554057 C1QTNF8P60827 252 aa9.65□□□□□ -0.86
MTHFD1-205ENST00000554057 SLC27A3Q5K4L6 730 aa9.65□□□□□ -0.86
MTHFD1-205ENST00000554057 SYTL4Q96C24 671 aaPredicted RBP9.65□□□□□ -0.86
MTHFD1-205ENST00000554057 PPP4R2Q9NY27 417 aa9.65□□□□□ -0.86
MTHFD1-205ENST00000554057 LY75O60449 1722 aa9.65□□□□□ -0.87
MTHFD1-205ENST00000554057 NSD2O96028 1365 aa9.64□□□□□ -0.87
MTHFD1-205ENST00000554057 POLD1P28340 1107 aa9.64□□□□□ -0.87
MTHFD1-205ENST00000554057 NLGN2Q8NFZ4 835 aa9.64□□□□□ -0.87
MTHFD1-205ENST00000554057 IP6K1Q92551 441 aa9.64□□□□□ -0.87
MTHFD1-205ENST00000554057 TERF2IPQ9NYB0 399 aa9.64□□□□□ -0.87
MTHFD1-205ENST00000554057 MEGF6O75095 1541 aa9.64□□□□□ -0.87
MTHFD1-205ENST00000554057 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
MTHFD1-205ENST00000554057 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
MTHFD1-205ENST00000554057 PRIM1P49642 420 aaKnown RBP9.63□□□□□ -0.87
MTHFD1-205ENST00000554057 SLC16A10Q8TF71 515 aa9.63□□□□□ -0.87
MTHFD1-205ENST00000554057 TFCP2L1Q9NZI6 479 aa9.63□□□□□ -0.87
MTHFD1-205ENST00000554057 KIF20BQ96Q89 1820 aa9.63□□□□□ -0.87
MTHFD1-205ENST00000554057 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
MTHFD1-205ENST00000554057 FBLN1P23142 703 aa9.62□□□□□ -0.87
MTHFD1-205ENST00000554057 HOXC9P31274 260 aa9.61□□□□□ -0.87
MTHFD1-205ENST00000554057 AMPHP49418 695 aa9.61□□□□□ -0.87
MTHFD1-205ENST00000554057 MSL1Q68DK7 614 aa9.61□□□□□ -0.87
MTHFD1-205ENST00000554057 COG3Q96JB2 828 aa9.61□□□□□ -0.87
MTHFD1-205ENST00000554057 CCNL1Q9UK58 526 aaPredicted RBP9.61□□□□□ -0.87
MTHFD1-205ENST00000554057 GOLGB1Q14789 3259 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-205ENST00000554057 KIF7Q2M1P5 1343 aa9.6□□□□□ -0.87
MTHFD1-205ENST00000554057 MSH5O43196 834 aa9.6□□□□□ -0.87
MTHFD1-205ENST00000554057 YBX3P16989 372 aaKnown RBP eCLIP9.6□□□□□ -0.87
MTHFD1-205ENST00000554057 USHBP1Q8N6Y0 703 aa9.6□□□□□ -0.87
MTHFD1-205ENST00000554057 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-205ENST00000554057 MRS2Q9HD23 443 aa9.6□□□□□ -0.87
MTHFD1-205ENST00000554057 ANKRD26Q9UPS8 1709 aa9.59□□□□□ -0.87
MTHFD1-205ENST00000554057 C5P01031 1676 aa9.59□□□□□ -0.87
MTHFD1-205ENST00000554057 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
MTHFD1-205ENST00000554057 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-205ENST00000554057 RTL1A6NKG5 1358 aa9.59□□□□□ -0.87
MTHFD1-205ENST00000554057 USP47Q96K76 1375 aa9.59□□□□□ -0.87
MTHFD1-205ENST00000554057 SMG6Q86US8 1419 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-205ENST00000554057 TESK2Q96S53 571 aa9.58□□□□□ -0.88
MTHFD1-205ENST00000554057 ATP10DQ9P241 1426 aa9.57□□□□□ -0.88
MTHFD1-205ENST00000554057 TOGARAM1Q9Y4F4 1720 aa9.57□□□□□ -0.88
MTHFD1-205ENST00000554057 NBPF6Q5VWK0 638 aa9.57□□□□□ -0.88
MTHFD1-205ENST00000554057 NBPF4Q96M43 638 aa9.57□□□□□ -0.88
MTHFD1-205ENST00000554057 PUS7Q96PZ0 661 aaKnown RBP9.57□□□□□ -0.88
MTHFD1-205ENST00000554057 TAF1LQ8IZX4 1826 aa9.56□□□□□ -0.88
MTHFD1-205ENST00000554057 PALLDQ8WX93 1383 aa9.56□□□□□ -0.88
MTHFD1-205ENST00000554057 ST20-MTHFSA0A0A6YYL1 179 aa9.56□□□□□ -0.88
MTHFD1-205ENST00000554057 GRIN3BO60391 1043 aa9.56□□□□□ -0.88
MTHFD1-205ENST00000554057 RAPGEF4Q8WZA2 1011 aa9.56□□□□□ -0.88
MTHFD1-205ENST00000554057 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
MTHFD1-205ENST00000554057 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
MTHFD1-205ENST00000554057 PCDH11XQ9BZA7 1347 aa9.55□□□□□ -0.88
MTHFD1-205ENST00000554057 PCDH11YQ9BZA8 1340 aa9.55□□□□□ -0.88
MTHFD1-205ENST00000554057 C4BP0C0L5 1744 aa9.54□□□□□ -0.88
MTHFD1-205ENST00000554057 TATP17735 454 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-205ENST00000554057 CCDC184Q52MB2 194 aa9.54□□□□□ -0.88
MTHFD1-205ENST00000554057 FAM9BQ8IZU0 186 aa9.54□□□□□ -0.88
MTHFD1-205ENST00000554057 WWC3Q9ULE0 1092 aa9.54□□□□□ -0.88
MTHFD1-205ENST00000554057 ITGB4P16144 1822 aa9.54□□□□□ -0.88
MTHFD1-205ENST00000554057 CGNL1Q0VF96 1302 aa9.54□□□□□ -0.88
MTHFD1-205ENST00000554057 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 UBR3Q6ZT12 1888 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 FLT4P35916 1363 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 FYB1O15117 783 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 PHF14O94880 888 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 HSP90AB2PQ58FF8 381 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 MPRIPQ6WCQ1 1025 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 SMIM5Q71RC9 77 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 AMIGO3Q86WK7 504 aa9.53□□□□□ -0.88
MTHFD1-205ENST00000554057 ADCY9O60503 1353 aa9.52□□□□□ -0.88
MTHFD1-205ENST00000554057 INSRP06213 1382 aa9.52□□□□□ -0.88
MTHFD1-205ENST00000554057 CYP27B1O15528 508 aa9.52□□□□□ -0.89
MTHFD1-205ENST00000554057 ZNF526Q8TF50 670 aaPredicted RBP9.52□□□□□ -0.89
MTHFD1-205ENST00000554057 AK7Q96M32 723 aa9.52□□□□□ -0.89
MTHFD1-205ENST00000554057 NUDCQ9Y266 331 aa9.52□□□□□ -0.89
MTHFD1-205ENST00000554057 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
MTHFD1-205ENST00000554057 ERICH6Q7L0X2 663 aa9.51□□□□□ -0.89
MTHFD1-205ENST00000554057 FLAD1Q8NFF5 587 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms