RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 HMGB2P26583 209 aaKnown RBP10.95□□□□□ -0.66
ABCD4-220ENST00000553998 KCNQ4P56696 695 aa10.95□□□□□ -0.66
ABCD4-220ENST00000553998 EDC4Q6P2E9 1401 aaKnown RBP10.94□□□□□ -0.66
ABCD4-220ENST00000553998 ADCY9O60503 1353 aa10.94□□□□□ -0.66
ABCD4-220ENST00000553998 ROCK2O75116 1388 aaKnown RBP10.94□□□□□ -0.66
ABCD4-220ENST00000553998 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
ABCD4-220ENST00000553998 HDGFL2Q7Z4V5 671 aaPredicted RBP10.94□□□□□ -0.66
ABCD4-220ENST00000553998 ZCRB1Q8TBF4 217 aaKnown RBP10.94□□□□□ -0.66
ABCD4-220ENST00000553998 CCNL1Q9UK58 526 aaPredicted RBP10.94□□□□□ -0.66
ABCD4-220ENST00000553998 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
ABCD4-220ENST00000553998 FLAD1Q8NFF5 587 aa10.93□□□□□ -0.66
ABCD4-220ENST00000553998 SLC12A5Q9H2X9 1139 aa10.93□□□□□ -0.66
ABCD4-220ENST00000553998 GPBP1L1Q9HC44 474 aaPredicted RBP10.93□□□□□ -0.66
ABCD4-220ENST00000553998 SYTL4Q96C24 671 aaPredicted RBP10.92□□□□□ -0.66
ABCD4-220ENST00000553998 TERF2IPQ9NYB0 399 aa10.92□□□□□ -0.66
ABCD4-220ENST00000553998 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
ABCD4-220ENST00000553998 HOXC9P31274 260 aa10.91□□□□□ -0.66
ABCD4-220ENST00000553998 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
ABCD4-220ENST00000553998 TONSLQ96HA7 1378 aa10.9□□□□□ -0.66
ABCD4-220ENST00000553998 USP47Q96K76 1375 aa10.9□□□□□ -0.66
ABCD4-220ENST00000553998 MAP3K19Q56UN5 1328 aa10.9□□□□□ -0.66
ABCD4-220ENST00000553998 TMC1Q8TDI8 760 aa10.9□□□□□ -0.66
ABCD4-220ENST00000553998 A0A1W2PP64 1363 aa10.9□□□□□ -0.67
ABCD4-220ENST00000553998 MSH5O43196 834 aa10.89□□□□□ -0.67
ABCD4-220ENST00000553998 LTV1Q96GA3 475 aaPredicted RBP10.89□□□□□ -0.67
ABCD4-220ENST00000553998 LY75O60449 1722 aa10.89□□□□□ -0.67
ABCD4-220ENST00000553998 KIF3CO14782 793 aa10.88□□□□□ -0.67
ABCD4-220ENST00000553998 NBPF6Q5VWK0 638 aa10.88□□□□□ -0.67
ABCD4-220ENST00000553998 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
ABCD4-220ENST00000553998 NBPF4Q96M43 638 aa10.88□□□□□ -0.67
ABCD4-220ENST00000553998 MEGF6O75095 1541 aa10.88□□□□□ -0.67
ABCD4-220ENST00000553998 COG3Q96JB2 828 aa10.87□□□□□ -0.67
ABCD4-220ENST00000553998 FBLN1P23142 703 aa10.86□□□□□ -0.67
ABCD4-220ENST00000553998 AMPHP49418 695 aa10.86□□□□□ -0.67
ABCD4-220ENST00000553998 DNAJC5GQ8N7S2 189 aa10.86□□□□□ -0.67
ABCD4-220ENST00000553998 CARD11Q9BXL7 1154 aa10.86□□□□□ -0.67
ABCD4-220ENST00000553998 RTL1A6NKG5 1358 aa10.86□□□□□ -0.67
ABCD4-220ENST00000553998 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
ABCD4-220ENST00000553998 FAM208AQ9UK61 1670 aaKnown RBP10.85□□□□□ -0.67
ABCD4-220ENST00000553998 IGSF1Q8N6C5 1336 aa10.85□□□□□ -0.67
ABCD4-220ENST00000553998 LTN1O94822 1766 aa10.85□□□□□ -0.67
ABCD4-220ENST00000553998 APLP1P51693 650 aa10.85□□□□□ -0.67
ABCD4-220ENST00000553998 AMIGO3Q86WK7 504 aa10.85□□□□□ -0.67
ABCD4-220ENST00000553998 PALLDQ8WX93 1383 aa10.85□□□□□ -0.67
ABCD4-220ENST00000553998 SLC24A1O60721 1099 aa10.84□□□□□ -0.67
ABCD4-220ENST00000553998 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
ABCD4-220ENST00000553998 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
ABCD4-220ENST00000553998 TESK2Q96S53 571 aa10.84□□□□□ -0.67
ABCD4-220ENST00000553998 PCDH11XQ9BZA7 1347 aa10.84□□□□□ -0.67
ABCD4-220ENST00000553998 PCDH11YQ9BZA8 1340 aa10.84□□□□□ -0.67
ABCD4-220ENST00000553998 CYP27B1O15528 508 aa10.83□□□□□ -0.68
ABCD4-220ENST00000553998 TOMM70O94826 608 aa10.83□□□□□ -0.68
ABCD4-220ENST00000553998 TATP17735 454 aaPredicted RBP10.83□□□□□ -0.68
ABCD4-220ENST00000553998 SSFA2P28290 1259 aa10.83□□□□□ -0.68
ABCD4-220ENST00000553998 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
ABCD4-220ENST00000553998 ZNF526Q8TF50 670 aaPredicted RBP10.83□□□□□ -0.68
ABCD4-220ENST00000553998 DOT1LQ8TEK3 1739 aa10.83□□□□□ -0.68
ABCD4-220ENST00000553998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
ABCD4-220ENST00000553998 FYB1O15117 783 aa10.82□□□□□ -0.68
ABCD4-220ENST00000553998 MPRIPQ6WCQ1 1025 aa10.82□□□□□ -0.68
ABCD4-220ENST00000553998 AK7Q96M32 723 aa10.82□□□□□ -0.68
ABCD4-220ENST00000553998 NSD3Q9BZ95 1437 aa10.82□□□□□ -0.68
ABCD4-220ENST00000553998 INSRP06213 1382 aa10.81□□□□□ -0.68
ABCD4-220ENST00000553998 KIF24Q5T7B8 1368 aa10.81□□□□□ -0.68
ABCD4-220ENST00000553998 RRS1Q15050 365 aaKnown RBP10.81□□□□□ -0.68
ABCD4-220ENST00000553998 USHBP1Q8N6Y0 703 aa10.81□□□□□ -0.68
ABCD4-220ENST00000553998 PIGBQ92521 554 aa10.81□□□□□ -0.68
ABCD4-220ENST00000553998 TGFB2P61812 414 aa10.8□□□□□ -0.68
ABCD4-220ENST00000553998 HSP90AB2PQ58FF8 381 aa10.8□□□□□ -0.68
ABCD4-220ENST00000553998 CICQ96RK0 1608 aaPredicted RBP10.8□□□□□ -0.68
ABCD4-220ENST00000553998 KAT6BQ8WYB5 2073 aa10.8□□□□□ -0.68
ABCD4-220ENST00000553998 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
ABCD4-220ENST00000553998 LOC102724428A0A0B4J2F2 783 aa10.79□□□□□ -0.68
ABCD4-220ENST00000553998 SIK1P57059 783 aa10.79□□□□□ -0.68
ABCD4-220ENST00000553998 LINC00116Q8NCU8 138 aa10.79□□□□□ -0.68
ABCD4-220ENST00000553998 C5P01031 1676 aa10.79□□□□□ -0.68
ABCD4-220ENST00000553998 NCAPD2Q15021 1401 aa10.78□□□□□ -0.68
ABCD4-220ENST00000553998 PHF14O94880 888 aa10.78□□□□□ -0.68
ABCD4-220ENST00000553998 SMIM5Q71RC9 77 aa10.78□□□□□ -0.68
ABCD4-220ENST00000553998 JMYQ8N9B5 988 aa10.78□□□□□ -0.68
ABCD4-220ENST00000553998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.68
ABCD4-220ENST00000553998 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
ABCD4-220ENST00000553998 FLT4P35916 1363 aa10.77□□□□□ -0.68
ABCD4-220ENST00000553998 ST20-MTHFSA0A0A6YYL1 179 aa10.77□□□□□ -0.69
ABCD4-220ENST00000553998 ITPK1Q13572 414 aa10.77□□□□□ -0.69
ABCD4-220ENST00000553998 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
ABCD4-220ENST00000553998 GGNBP2Q9H3C7 697 aa10.77□□□□□ -0.69
ABCD4-220ENST00000553998 PXDNLA1KZ92 1463 aa10.76□□□□□ -0.69
ABCD4-220ENST00000553998 TOGARAM1Q9Y4F4 1720 aa10.76□□□□□ -0.69
ABCD4-220ENST00000553998 MMP10P09238 476 aa10.76□□□□□ -0.69
ABCD4-220ENST00000553998 NLGN1Q8N2Q7 840 aa10.76□□□□□ -0.69
ABCD4-220ENST00000553998 WWC3Q9ULE0 1092 aa10.76□□□□□ -0.69
ABCD4-220ENST00000553998 PCNTO95613 3336 aa10.75□□□□□ -0.69
ABCD4-220ENST00000553998 KLRG1Q96E93 195 aa10.75□□□□□ -0.69
ABCD4-220ENST00000553998 NMRK2Q9NPI5 230 aa10.75□□□□□ -0.69
ABCD4-220ENST00000553998 ASAP1Q9ULH1 1129 aa10.75□□□□□ -0.69
ABCD4-220ENST00000553998 SPG7Q9UQ90 795 aa10.75□□□□□ -0.69
ABCD4-220ENST00000553998 A0A0G2JLW4 131 aa10.74□□□□□ -0.69
ABCD4-220ENST00000553998 GNPATO15228 680 aa10.74□□□□□ -0.69
ABCD4-220ENST00000553998 ADRA2BP18089 450 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms