RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 PDGFDQ9GZP0 370 aaPredicted RBP12.58□□□□□ -0.4
SDR39U1-207ENST00000553937 SPON1Q9HCB6 807 aa12.58□□□□□ -0.4
SDR39U1-207ENST00000553937 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
SDR39U1-207ENST00000553937 INSRP06213 1382 aa12.57□□□□□ -0.4
SDR39U1-207ENST00000553937 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
SDR39U1-207ENST00000553937 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
SDR39U1-207ENST00000553937 NBPF6Q5VWK0 638 aa12.57□□□□□ -0.4
SDR39U1-207ENST00000553937 USHBP1Q8N6Y0 703 aa12.57□□□□□ -0.4
SDR39U1-207ENST00000553937 NBPF4Q96M43 638 aa12.57□□□□□ -0.4
SDR39U1-207ENST00000553937 STK32BQ9NY57 414 aa12.57□□□□□ -0.4
SDR39U1-207ENST00000553937 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
SDR39U1-207ENST00000553937 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
SDR39U1-207ENST00000553937 C5P01031 1676 aa12.56□□□□□ -0.4
SDR39U1-207ENST00000553937 COL24A1Q17RW2 1714 aa12.55□□□□□ -0.4
SDR39U1-207ENST00000553937 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.4
SDR39U1-207ENST00000553937 ZCRB1Q8TBF4 217 aaKnown RBP12.55□□□□□ -0.4
SDR39U1-207ENST00000553937 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
SDR39U1-207ENST00000553937 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
SDR39U1-207ENST00000553937 NSD2O96028 1365 aa12.55□□□□□ -0.4
SDR39U1-207ENST00000553937 HSPA5P11021 654 aaKnown RBP12.54□□□□□ -0.4
SDR39U1-207ENST00000553937 SYTL4Q96C24 671 aaPredicted RBP12.54□□□□□ -0.4
SDR39U1-207ENST00000553937 CGNL1Q0VF96 1302 aa12.54□□□□□ -0.4
SDR39U1-207ENST00000553937 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
SDR39U1-207ENST00000553937 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
SDR39U1-207ENST00000553937 LRRC4BQ9NT99 713 aa12.53□□□□□ -0.4
SDR39U1-207ENST00000553937 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
SDR39U1-207ENST00000553937 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
SDR39U1-207ENST00000553937 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
SDR39U1-207ENST00000553937 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.41
SDR39U1-207ENST00000553937 ZNF827Q17R98 1081 aa12.51□□□□□ -0.41
SDR39U1-207ENST00000553937 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
SDR39U1-207ENST00000553937 PCDH11XQ9BZA7 1347 aa12.51□□□□□ -0.41
SDR39U1-207ENST00000553937 PCDH11YQ9BZA8 1340 aa12.51□□□□□ -0.41
SDR39U1-207ENST00000553937 PTGER2P43116 358 aa12.5□□□□□ -0.41
SDR39U1-207ENST00000553937 SLC27A3Q5K4L6 730 aa12.5□□□□□ -0.41
SDR39U1-207ENST00000553937 VIRMAQ69YN4 1812 aaKnown RBP12.49□□□□□ -0.41
SDR39U1-207ENST00000553937 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
SDR39U1-207ENST00000553937 KCNQ4P56696 695 aa12.49□□□□□ -0.41
SDR39U1-207ENST00000553937 MTFR1LQ9H019 292 aa12.49□□□□□ -0.41
SDR39U1-207ENST00000553937 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
SDR39U1-207ENST00000553937 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
SDR39U1-207ENST00000553937 PANK3Q9H999 370 aa12.48□□□□□ -0.41
SDR39U1-207ENST00000553937 POLKQ9UBT6 870 aa12.48□□□□□ -0.41
SDR39U1-207ENST00000553937 CHD4Q14839 1912 aa12.48□□□□□ -0.41
SDR39U1-207ENST00000553937 UBR3Q6ZT12 1888 aa12.48□□□□□ -0.41
SDR39U1-207ENST00000553937 CYP27B1O15528 508 aa12.47□□□□□ -0.41
SDR39U1-207ENST00000553937 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
SDR39U1-207ENST00000553937 C4BP0C0L5 1744 aa12.47□□□□□ -0.41
SDR39U1-207ENST00000553937 PNPLA7Q6ZV29 1317 aa12.46□□□□□ -0.41
SDR39U1-207ENST00000553937 EYA1Q99502 592 aa12.46□□□□□ -0.41
SDR39U1-207ENST00000553937 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.41
SDR39U1-207ENST00000553937 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
SDR39U1-207ENST00000553937 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
SDR39U1-207ENST00000553937 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
SDR39U1-207ENST00000553937 FHDC1Q9C0D6 1143 aaPredicted RBP12.44□□□□□ -0.42
SDR39U1-207ENST00000553937 TFCP2L1Q9NZI6 479 aa12.44□□□□□ -0.42
SDR39U1-207ENST00000553937 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
SDR39U1-207ENST00000553937 SCN11AQ9UI33 1791 aa12.43□□□□□ -0.42
SDR39U1-207ENST00000553937 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
SDR39U1-207ENST00000553937 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
SDR39U1-207ENST00000553937 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
SDR39U1-207ENST00000553937 ARXQ96QS3 562 aa12.42□□□□□ -0.42
SDR39U1-207ENST00000553937 SYT17Q9BSW7 474 aa12.42□□□□□ -0.42
SDR39U1-207ENST00000553937 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
SDR39U1-207ENST00000553937 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
SDR39U1-207ENST00000553937 IGSF1Q8N6C5 1336 aa12.41□□□□□ -0.42
SDR39U1-207ENST00000553937 UTRNP46939 3433 aa12.41□□□□□ -0.42
SDR39U1-207ENST00000553937 NKX1-1Q15270 411 aaPredicted RBP12.41□□□□□ -0.42
SDR39U1-207ENST00000553937 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
SDR39U1-207ENST00000553937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
SDR39U1-207ENST00000553937 MAP3K5Q99683 1374 aa12.41□□□□□ -0.42
SDR39U1-207ENST00000553937 PLEKHG2Q9H7P9 1386 aa12.41□□□□□ -0.42
SDR39U1-207ENST00000553937 PHKG2P15735 406 aa12.4□□□□□ -0.42
SDR39U1-207ENST00000553937 KNSTRNQ9Y448 316 aa12.4□□□□□ -0.42
SDR39U1-207ENST00000553937 YY1P25490 414 aa12.39□□□□□ -0.43
SDR39U1-207ENST00000553937 COL23A1Q86Y22 540 aaPredicted RBP12.39□□□□□ -0.43
SDR39U1-207ENST00000553937 IFNL2Q8IZJ0 200 aa12.39□□□□□ -0.43
SDR39U1-207ENST00000553937 PIGBQ92521 554 aa12.39□□□□□ -0.43
SDR39U1-207ENST00000553937 MSH5O43196 834 aa12.38□□□□□ -0.43
SDR39U1-207ENST00000553937 POLD1P28340 1107 aa12.38□□□□□ -0.43
SDR39U1-207ENST00000553937 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
SDR39U1-207ENST00000553937 SMARCC1Q92922 1105 aaPredicted RBP12.38□□□□□ -0.43
SDR39U1-207ENST00000553937 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
SDR39U1-207ENST00000553937 TMOD3Q9NYL9 352 aa12.37□□□□□ -0.43
SDR39U1-207ENST00000553937 C4AP0C0L4 1744 aa12.37□□□□□ -0.43
SDR39U1-207ENST00000553937 GOLGB1Q14789 3259 aaKnown RBP12.36□□□□□ -0.43
SDR39U1-207ENST00000553937 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
SDR39U1-207ENST00000553937 TJP1Q07157 1748 aa12.36□□□□□ -0.43
SDR39U1-207ENST00000553937 KDM6AO15550 1401 aaPredicted RBP12.36□□□□□ -0.43
SDR39U1-207ENST00000553937 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
SDR39U1-207ENST00000553937 KDRP35968 1356 aa12.35□□□□□ -0.43
SDR39U1-207ENST00000553937 MSL1Q68DK7 614 aa12.35□□□□□ -0.43
SDR39U1-207ENST00000553937 AK7Q96M32 723 aa12.35□□□□□ -0.43
SDR39U1-207ENST00000553937 ASAP1Q9ULH1 1129 aa12.35□□□□□ -0.43
SDR39U1-207ENST00000553937 CICQ96RK0 1608 aaPredicted RBP12.35□□□□□ -0.43
SDR39U1-207ENST00000553937 LOC102724428A0A0B4J2F2 783 aa12.34□□□□□ -0.43
SDR39U1-207ENST00000553937 HMGB2P26583 209 aaKnown RBP12.34□□□□□ -0.43
SDR39U1-207ENST00000553937 SIK1P57059 783 aa12.34□□□□□ -0.43
SDR39U1-207ENST00000553937 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
SDR39U1-207ENST00000553937 ZNF530Q6P9A1 599 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms