RNA–Protein interactions for RNA: ENST00000553925.1

SEC23A-205, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 3

Gene SEC23A, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-205ENST00000553925 SLURP2P0DP57 97 aa8.09□□□□□ -1.11
SEC23A-205ENST00000553925 PROSER2Q86WR7 435 aaPredicted RBP8.09□□□□□ -1.11
SEC23A-205ENST00000553925 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
SEC23A-205ENST00000553925 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
SEC23A-205ENST00000553925 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
SEC23A-205ENST00000553925 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
SEC23A-205ENST00000553925 ARHGEF15O94989 841 aa8.08□□□□□ -1.12
SEC23A-205ENST00000553925 PTK2Q05397 1052 aa8.08□□□□□ -1.12
SEC23A-205ENST00000553925 PNMA1Q8ND90 353 aa8.08□□□□□ -1.12
SEC23A-205ENST00000553925 KANK3Q6NY19 840 aa8.07□□□□□ -1.12
SEC23A-205ENST00000553925 LYPD4Q6UWN0 246 aa8.07□□□□□ -1.12
SEC23A-205ENST00000553925 POM121Q96HA1 1249 aa8.07□□□□□ -1.12
SEC23A-205ENST00000553925 HMX1Q9NP08 348 aaPredicted RBP8.07□□□□□ -1.12
SEC23A-205ENST00000553925 ZNF784Q8NCA9 323 aaPredicted RBP8.06□□□□□ -1.12
SEC23A-205ENST00000553925 ADAM32Q8TC27 787 aa8.06□□□□□ -1.12
SEC23A-205ENST00000553925 GJD4Q96KN9 370 aaPredicted RBP8.06□□□□□ -1.12
SEC23A-205ENST00000553925 GDPD2Q9HCC8 539 aa8.06□□□□□ -1.12
SEC23A-205ENST00000553925 TBC1D2BQ9UPU7 963 aa8.06□□□□□ -1.12
SEC23A-205ENST00000553925 SUPT5HO00267 1087 aaKnown RBP8.05□□□□□ -1.12
SEC23A-205ENST00000553925 IGHA1P01876 353 aa8.05□□□□□ -1.12
SEC23A-205ENST00000553925 ADH1AP07327 375 aa8.05□□□□□ -1.12
SEC23A-205ENST00000553925 RHOQP17081 205 aa8.05□□□□□ -1.12
SEC23A-205ENST00000553925 ABL2P42684 1182 aa8.05□□□□□ -1.12
SEC23A-205ENST00000553925 NBPF20Q3BBV1 942 aa8.05□□□□□ -1.12
SEC23A-205ENST00000553925 DZIP3Q86Y13 1208 aaKnown RBP8.05□□□□□ -1.12
SEC23A-205ENST00000553925 SENP3-EIF4A1A0A087X0R7 540 aa8.04□□□□□ -1.12
SEC23A-205ENST00000553925 TRAK2O60296 914 aa8.04□□□□□ -1.12
SEC23A-205ENST00000553925 FOXD4L5Q5VV16 416 aaPredicted RBP8.04□□□□□ -1.12
SEC23A-205ENST00000553925 LYSMD3Q7Z3D4 306 aa8.04□□□□□ -1.12
SEC23A-205ENST00000553925 PRICKLE2Q7Z3G6 844 aa8.04□□□□□ -1.12
SEC23A-205ENST00000553925 TRIM34Q9BYJ4 488 aa8.04□□□□□ -1.12
SEC23A-205ENST00000553925 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
SEC23A-205ENST00000553925 CELA2BP08218 269 aaPredicted RBP8.03□□□□□ -1.12
SEC23A-205ENST00000553925 FOXK2Q01167 660 aa8.03□□□□□ -1.12
SEC23A-205ENST00000553925 SRSF11Q05519 484 aaKnown RBP8.03□□□□□ -1.12
SEC23A-205ENST00000553925 RIPOR1Q6ZS17 1223 aa8.03□□□□□ -1.12
SEC23A-205ENST00000553925 CYLDQ9NQC7 956 aa8.03□□□□□ -1.12
SEC23A-205ENST00000553925 ENAMQ9NRM1 1142 aa8.03□□□□□ -1.12
SEC23A-205ENST00000553925 CUEDC1Q9NWM3 386 aaPredicted RBP8.03□□□□□ -1.12
SEC23A-205ENST00000553925 ERVH48-1M5A8F1 160 aa8.02□□□□□ -1.13
SEC23A-205ENST00000553925 GPR25O00155 361 aa8.02□□□□□ -1.13
SEC23A-205ENST00000553925 PTGIRP43119 386 aa8.02□□□□□ -1.13
SEC23A-205ENST00000553925 ADD1P35611 737 aaKnown RBP8.01□□□□□ -1.13
SEC23A-205ENST00000553925 GAS6Q14393 721 aa8.01□□□□□ -1.13
SEC23A-205ENST00000553925 FNBP4Q8N3X1 1017 aaPredicted RBP8.01□□□□□ -1.13
SEC23A-205ENST00000553925 NEDD1Q8NHV4 660 aa8.01□□□□□ -1.13
SEC23A-205ENST00000553925 OCSTAMPQ9BR26 566 aa8.01□□□□□ -1.13
SEC23A-205ENST00000553925 ZNF330Q9Y3S2 320 aaPredicted RBP8.01□□□□□ -1.13
SEC23A-205ENST00000553925 MEN1O00255 615 aa8□□□□□ -1.13
SEC23A-205ENST00000553925 WASHC4Q2M389 1173 aa8□□□□□ -1.13
SEC23A-205ENST00000553925 FOXR1Q6PIV2 292 aa8□□□□□ -1.13
SEC23A-205ENST00000553925 PHF20L1A8MW92 1017 aa7.99□□□□□ -1.13
SEC23A-205ENST00000553925 PODNQ7Z5L7 613 aa7.99□□□□□ -1.13
SEC23A-205ENST00000553925 EPS8L1Q8TE68 723 aa7.99□□□□□ -1.13
SEC23A-205ENST00000553925 GPSM3Q9Y4H4 160 aa7.99□□□□□ -1.13
SEC23A-205ENST00000553925 CNTNAP5Q8WYK1 1306 aa7.99□□□□□ -1.13
SEC23A-205ENST00000553925 LILRA1O75019 489 aa7.98□□□□□ -1.13
SEC23A-205ENST00000553925 GAS2L1Q99501 681 aaPredicted RBP7.98□□□□□ -1.13
SEC23A-205ENST00000553925 IGF1RP08069 1367 aa7.97□□□□□ -1.13
SEC23A-205ENST00000553925 MSTNO14793 375 aa7.97□□□□□ -1.13
SEC23A-205ENST00000553925 GALNT6Q8NCL4 622 aa7.97□□□□□ -1.13
SEC23A-205ENST00000553925 ZNF837Q96EG3 531 aaPredicted RBP7.97□□□□□ -1.13
SEC23A-205ENST00000553925 MBIPQ9NS73 344 aa7.97□□□□□ -1.13
SEC23A-205ENST00000553925 ARID3CA6NKF2 412 aa7.96□□□□□ -1.14
SEC23A-205ENST00000553925 GPR37L1O60883 481 aa7.96□□□□□ -1.14
SEC23A-205ENST00000553925 IRF5Q13568 498 aa7.96□□□□□ -1.14
SEC23A-205ENST00000553925 GTPBP3Q969Y2 492 aaKnown RBP7.96□□□□□ -1.14
SEC23A-205ENST00000553925 PLA2G4EQ3MJ16 856 aa7.95□□□□□ -1.14
SEC23A-205ENST00000553925 TRIM22Q8IYM9 498 aa7.95□□□□□ -1.14
SEC23A-205ENST00000553925 KDF1Q8NAX2 398 aaPredicted RBP7.95□□□□□ -1.14
SEC23A-205ENST00000553925 ZNF777Q9ULD5 760 aaPredicted RBP7.95□□□□□ -1.14
SEC23A-205ENST00000553925 ATP5J2-PTCD1G3V325 749 aa7.94□□□□□ -1.14
SEC23A-205ENST00000553925 BCRP11274 1271 aa7.94□□□□□ -1.14
SEC23A-205ENST00000553925 SLC27A3Q5K4L6 730 aa7.94□□□□□ -1.14
SEC23A-205ENST00000553925 BEND7Q8N7W2 519 aaPredicted RBP7.94□□□□□ -1.14
SEC23A-205ENST00000553925 DCAF5Q96JK2 942 aa7.94□□□□□ -1.14
SEC23A-205ENST00000553925 TRERF1Q96PN7 1200 aa7.94□□□□□ -1.14
SEC23A-205ENST00000553925 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
SEC23A-205ENST00000553925 SOX11P35716 441 aa7.93□□□□□ -1.14
SEC23A-205ENST00000553925 RNF144AP50876 292 aaPredicted RBP7.93□□□□□ -1.14
SEC23A-205ENST00000553925 DBN1Q16643 649 aa7.93□□□□□ -1.14
SEC23A-205ENST00000553925 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
SEC23A-205ENST00000553925 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
SEC23A-205ENST00000553925 NLRP3Q96P20 1036 aa7.93□□□□□ -1.14
SEC23A-205ENST00000553925 SPOCK3Q9BQ16 436 aa7.93□□□□□ -1.14
SEC23A-205ENST00000553925 ZBBXA8MT70 800 aa7.92□□□□□ -1.14
SEC23A-205ENST00000553925 ESPNB1AK53 854 aa7.92□□□□□ -1.14
SEC23A-205ENST00000553925 VAC14Q08AM6 782 aa7.92□□□□□ -1.14
SEC23A-205ENST00000553925 POU4F2Q12837 409 aa7.92□□□□□ -1.14
SEC23A-205ENST00000553925 NR1H3Q13133 447 aa7.92□□□□□ -1.14
SEC23A-205ENST00000553925 ZNF592Q92610 1267 aa7.92□□□□□ -1.14
SEC23A-205ENST00000553925 CALR3Q96L12 384 aaKnown RBP7.92□□□□□ -1.14
SEC23A-205ENST00000553925 C1orf115Q9H7X2 142 aa7.92□□□□□ -1.14
SEC23A-205ENST00000553925 POM121CA8CG34 1229 aa7.91□□□□□ -1.14
SEC23A-205ENST00000553925 H7C1W4 665 aa7.91□□□□□ -1.14
SEC23A-205ENST00000553925 MX2P20592 715 aa7.91□□□□□ -1.14
SEC23A-205ENST00000553925 EIF4G2P78344 907 aaKnown RBP eCLIP7.91□□□□□ -1.14
SEC23A-205ENST00000553925 GLMNQ92990 594 aa7.91□□□□□ -1.14
SEC23A-205ENST00000553925 ACDQ96AP0 544 aa7.91□□□□□ -1.14
SEC23A-205ENST00000553925 GMCL1Q96IK5 515 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms