RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
PSMC6-205ENST00000553899 NEFMP07197 916 aa18.07■□□□□ 0.48
PSMC6-205ENST00000553899 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
PSMC6-205ENST00000553899 AEBP1Q8IUX7 1158 aa18.07■□□□□ 0.48
PSMC6-205ENST00000553899 PLEKHF1Q96S99 279 aa18.07■□□□□ 0.48
PSMC6-205ENST00000553899 SPG7Q9UQ90 795 aa18.07■□□□□ 0.48
PSMC6-205ENST00000553899 MEGF6O75095 1541 aa18.07■□□□□ 0.48
PSMC6-205ENST00000553899 FAM98CQ17RN3 349 aaKnown RBP18.06■□□□□ 0.48
PSMC6-205ENST00000553899 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
PSMC6-205ENST00000553899 TNS2Q63HR2 1409 aa18.06■□□□□ 0.48
PSMC6-205ENST00000553899 EXOC5O00471 708 aa18.05■□□□□ 0.48
PSMC6-205ENST00000553899 HMOX1P09601 288 aa18.05■□□□□ 0.48
PSMC6-205ENST00000553899 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
PSMC6-205ENST00000553899 USHBP1Q8N6Y0 703 aa18.05■□□□□ 0.48
PSMC6-205ENST00000553899 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
PSMC6-205ENST00000553899 PRKAR2BP31323 418 aa18.04■□□□□ 0.48
PSMC6-205ENST00000553899 DDB1Q16531 1140 aa18.04■□□□□ 0.48
PSMC6-205ENST00000553899 ZCRB1Q8TBF4 217 aaKnown RBP18.04■□□□□ 0.48
PSMC6-205ENST00000553899 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
PSMC6-205ENST00000553899 BCL9O00512 1426 aa18.04■□□□□ 0.48
PSMC6-205ENST00000553899 SEPT12Q8IYM1 358 aa18.03■□□□□ 0.48
PSMC6-205ENST00000553899 PCDH11XQ9BZA7 1347 aa18.02■□□□□ 0.48
PSMC6-205ENST00000553899 PCDH11YQ9BZA8 1340 aa18.02■□□□□ 0.48
PSMC6-205ENST00000553899 GAS2L2Q8NHY3 880 aa18.02■□□□□ 0.48
PSMC6-205ENST00000553899 SHANK3Q9BYB0 1731 aa18.02■□□□□ 0.48
PSMC6-205ENST00000553899 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
PSMC6-205ENST00000553899 MAPK8IP3Q9UPT6 1336 aa18■□□□□ 0.47
PSMC6-205ENST00000553899 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
PSMC6-205ENST00000553899 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
PSMC6-205ENST00000553899 PDE3BQ13370 1112 aa17.99■□□□□ 0.47
PSMC6-205ENST00000553899 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
PSMC6-205ENST00000553899 PHACTR3Q96KR7 559 aa17.99■□□□□ 0.47
PSMC6-205ENST00000553899 RGS12O14924 1447 aa17.98■□□□□ 0.47
PSMC6-205ENST00000553899 AKAP4Q5JQC9 854 aa17.98■□□□□ 0.47
PSMC6-205ENST00000553899 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
PSMC6-205ENST00000553899 ADAMTS7Q9UKP4 1686 aa17.97■□□□□ 0.47
PSMC6-205ENST00000553899 CYP27B1O15528 508 aa17.97■□□□□ 0.47
PSMC6-205ENST00000553899 NFE2L2Q16236 605 aa17.97■□□□□ 0.47
PSMC6-205ENST00000553899 MTHFSDQ2M296 383 aaKnown RBP17.97■□□□□ 0.47
PSMC6-205ENST00000553899 FAM9BQ8IZU0 186 aa17.97■□□□□ 0.47
PSMC6-205ENST00000553899 PHKG2P15735 406 aa17.96■□□□□ 0.47
PSMC6-205ENST00000553899 C1orf141Q5JVX7 400 aa17.96■□□□□ 0.47
PSMC6-205ENST00000553899 KRT27Q7Z3Y8 459 aa17.96■□□□□ 0.47
PSMC6-205ENST00000553899 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
PSMC6-205ENST00000553899 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
PSMC6-205ENST00000553899 LMOD3Q0VAK6 560 aa17.95■□□□□ 0.46
PSMC6-205ENST00000553899 CCDC27Q2M243 656 aa17.95■□□□□ 0.46
PSMC6-205ENST00000553899 ZNF530Q6P9A1 599 aaPredicted RBP17.95■□□□□ 0.46
PSMC6-205ENST00000553899 MAP3K5Q99683 1374 aa17.94■□□□□ 0.46
PSMC6-205ENST00000553899 A0A0G2JS52 829 aa17.94■□□□□ 0.46
PSMC6-205ENST00000553899 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
PSMC6-205ENST00000553899 MYT1Q01538 1121 aa17.94■□□□□ 0.46
PSMC6-205ENST00000553899 MARCH10Q8NA82 808 aaPredicted RBP17.94■□□□□ 0.46
PSMC6-205ENST00000553899 DLG5Q8TDM6 1919 aa17.94■□□□□ 0.46
PSMC6-205ENST00000553899 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
PSMC6-205ENST00000553899 SCN11AQ9UI33 1791 aa17.93■□□□□ 0.46
PSMC6-205ENST00000553899 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
PSMC6-205ENST00000553899 DDX54Q8TDD1 881 aaKnown RBP17.92■□□□□ 0.46
PSMC6-205ENST00000553899 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
PSMC6-205ENST00000553899 EP400Q96L91 3159 aa17.91■□□□□ 0.46
PSMC6-205ENST00000553899 APAF1O14727 1248 aa17.9■□□□□ 0.46
PSMC6-205ENST00000553899 RIPK4P57078 832 aa17.9■□□□□ 0.46
PSMC6-205ENST00000553899 CCDC146Q8IYE0 955 aa17.9■□□□□ 0.46
PSMC6-205ENST00000553899 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
PSMC6-205ENST00000553899 VIRMAQ69YN4 1812 aaKnown RBP17.89■□□□□ 0.45
PSMC6-205ENST00000553899 SBF2Q86WG5 1849 aa17.89■□□□□ 0.45
PSMC6-205ENST00000553899 MRC1P22897 1456 aa17.88■□□□□ 0.45
PSMC6-205ENST00000553899 CALD1Q05682 793 aaKnown RBP17.88■□□□□ 0.45
PSMC6-205ENST00000553899 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
PSMC6-205ENST00000553899 KDM6AO15550 1401 aaPredicted RBP17.87■□□□□ 0.45
PSMC6-205ENST00000553899 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
PSMC6-205ENST00000553899 IL17REQ8NFR9 667 aa17.86■□□□□ 0.45
PSMC6-205ENST00000553899 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
PSMC6-205ENST00000553899 NHSQ6T4R5 1651 aa17.86■□□□□ 0.45
PSMC6-205ENST00000553899 SIPA1L3O60292 1781 aaPredicted RBP17.85■□□□□ 0.45
PSMC6-205ENST00000553899 ITGB4P16144 1822 aa17.85■□□□□ 0.45
PSMC6-205ENST00000553899 DOT1LQ8TEK3 1739 aa17.84■□□□□ 0.45
PSMC6-205ENST00000553899 TOGARAM1Q9Y4F4 1720 aa17.84■□□□□ 0.45
PSMC6-205ENST00000553899 IL16Q14005 1332 aa17.84■□□□□ 0.45
PSMC6-205ENST00000553899 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
PSMC6-205ENST00000553899 CCDC125Q86Z20 511 aa17.84■□□□□ 0.45
PSMC6-205ENST00000553899 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
PSMC6-205ENST00000553899 BCL11BQ9C0K0 894 aaPredicted RBP17.84■□□□□ 0.45
PSMC6-205ENST00000553899 SLC52A2Q9HAB3 445 aa17.84■□□□□ 0.45
PSMC6-205ENST00000553899 WWC1Q8IX03 1113 aa17.83■□□□□ 0.44
PSMC6-205ENST00000553899 LGR6Q9HBX8 967 aa17.83■□□□□ 0.44
PSMC6-205ENST00000553899 ZNF521Q96K83 1311 aa17.82■□□□□ 0.44
PSMC6-205ENST00000553899 TEFQ10587 303 aa17.82■□□□□ 0.44
PSMC6-205ENST00000553899 HMGB2P26583 209 aaKnown RBP17.81■□□□□ 0.44
PSMC6-205ENST00000553899 CABP4P57796 275 aa17.81■□□□□ 0.44
PSMC6-205ENST00000553899 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
PSMC6-205ENST00000553899 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
PSMC6-205ENST00000553899 RRP7AQ9Y3A4 280 aaKnown RBP17.81■□□□□ 0.44
PSMC6-205ENST00000553899 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
PSMC6-205ENST00000553899 NEUROD2Q15784 382 aa17.8■□□□□ 0.44
PSMC6-205ENST00000553899 MCM10Q7L590 875 aa17.8■□□□□ 0.44
PSMC6-205ENST00000553899 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
PSMC6-205ENST00000553899 RGPD3A6NKT7 1758 aaPredicted RBP17.79■□□□□ 0.44
PSMC6-205ENST00000553899 RGPD4Q7Z3J3 1758 aa17.79■□□□□ 0.44
PSMC6-205ENST00000553899 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms