RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 TATP17735 454 aaPredicted RBP24.36■■□□□ 1.49
FOXN3-204ENST00000553840 PROM2Q8N271 834 aa24.36■■□□□ 1.49
FOXN3-204ENST00000553840 PANK3Q9H999 370 aa24.36■■□□□ 1.49
FOXN3-204ENST00000553840 MEGF6O75095 1541 aa24.35■■□□□ 1.49
FOXN3-204ENST00000553840 USHBP1Q8N6Y0 703 aa24.35■■□□□ 1.49
FOXN3-204ENST00000553840 SHANK3Q9BYB0 1731 aa24.34■■□□□ 1.49
FOXN3-204ENST00000553840 STK32BQ9NY57 414 aa24.33■■□□□ 1.49
FOXN3-204ENST00000553840 WASHC2AQ641Q2 1341 aa24.33■■□□□ 1.48
FOXN3-204ENST00000553840 SYTL4Q96C24 671 aaPredicted RBP24.32■■□□□ 1.48
FOXN3-204ENST00000553840 NSD2O96028 1365 aa24.31■■□□□ 1.48
FOXN3-204ENST00000553840 DOT1LQ8TEK3 1739 aa24.31■■□□□ 1.48
FOXN3-204ENST00000553840 ANO8Q9HCE9 1232 aaPredicted RBP24.31■■□□□ 1.48
FOXN3-204ENST00000553840 SPON1Q9HCB6 807 aa24.3■■□□□ 1.48
FOXN3-204ENST00000553840 TNNT2P45379 298 aaPredicted RBP24.29■■□□□ 1.48
FOXN3-204ENST00000553840 POLKQ9UBT6 870 aa24.29■■□□□ 1.48
FOXN3-204ENST00000553840 PCDH11XQ9BZA7 1347 aa24.29■■□□□ 1.48
FOXN3-204ENST00000553840 PCDH11YQ9BZA8 1340 aa24.29■■□□□ 1.48
FOXN3-204ENST00000553840 SLC15A2Q16348 729 aa24.28■■□□□ 1.48
FOXN3-204ENST00000553840 KNSTRNQ9Y448 316 aa24.28■■□□□ 1.48
FOXN3-204ENST00000553840 PRIM1P49642 420 aaKnown RBP24.27■■□□□ 1.48
FOXN3-204ENST00000553840 CASZ1Q86V15 1759 aa24.26■■□□□ 1.47
FOXN3-204ENST00000553840 SLC27A3Q5K4L6 730 aa24.25■■□□□ 1.47
FOXN3-204ENST00000553840 PPP1R1BQ9UD71 204 aaPredicted RBP24.25■■□□□ 1.47
FOXN3-204ENST00000553840 MORC1Q86VD1 984 aa24.24■■□□□ 1.47
FOXN3-204ENST00000553840 PKD1L3Q7Z443 1732 aa24.22■■□□□ 1.47
FOXN3-204ENST00000553840 NCAPD2Q15021 1401 aa24.22■■□□□ 1.47
FOXN3-204ENST00000553840 KIF7Q2M1P5 1343 aa24.22■■□□□ 1.47
FOXN3-204ENST00000553840 EYA1Q99502 592 aa24.22■■□□□ 1.47
FOXN3-204ENST00000553840 SPG7Q9UQ90 795 aa24.22■■□□□ 1.47
FOXN3-204ENST00000553840 LY75O60449 1722 aa24.21■■□□□ 1.47
FOXN3-204ENST00000553840 PAPPAQ13219 1627 aa24.21■■□□□ 1.47
FOXN3-204ENST00000553840 EIF4A2Q14240 407 aaKnown RBP24.19■■□□□ 1.46
FOXN3-204ENST00000553840 LRRC4BQ9NT99 713 aa24.19■■□□□ 1.46
FOXN3-204ENST00000553840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.18■■□□□ 1.462e-6■□□□□ 10.4
FOXN3-204ENST00000553840 CYP27B1O15528 508 aa24.17■■□□□ 1.46
FOXN3-204ENST00000553840 ZBTB7AO95365 584 aa24.17■■□□□ 1.46
FOXN3-204ENST00000553840 HMGB2P26583 209 aaKnown RBP24.17■■□□□ 1.46
FOXN3-204ENST00000553840 PDGFDQ9GZP0 370 aaPredicted RBP24.17■■□□□ 1.46
FOXN3-204ENST00000553840 ITGB4P16144 1822 aa24.15■■□□□ 1.46
FOXN3-204ENST00000553840 MTFR1LQ9H019 292 aa24.15■■□□□ 1.46
FOXN3-204ENST00000553840 PLEKHG2Q9H7P9 1386 aa24.15■■□□□ 1.46
FOXN3-204ENST00000553840 QSER1Q2KHR3 1735 aa24.14■■□□□ 1.45
FOXN3-204ENST00000553840 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.45
FOXN3-204ENST00000553840 CCNL1Q9UK58 526 aaPredicted RBP24.14■■□□□ 1.45
FOXN3-204ENST00000553840 ZNF827Q17R98 1081 aa24.13■■□□□ 1.45
FOXN3-204ENST00000553840 ATF5Q9Y2D1 282 aaPredicted RBP24.13■■□□□ 1.45
FOXN3-204ENST00000553840 NKX1-1Q15270 411 aaPredicted RBP24.12■■□□□ 1.45
FOXN3-204ENST00000553840 IFNL2Q8IZJ0 200 aa24.12■■□□□ 1.45
FOXN3-204ENST00000553840 AKT1S1Q96B36 256 aa24.12■■□□□ 1.45
FOXN3-204ENST00000553840 IGSF1Q8N6C5 1336 aa24.11■■□□□ 1.45
FOXN3-204ENST00000553840 TOGARAM1Q9Y4F4 1720 aa24.11■■□□□ 1.45
FOXN3-204ENST00000553840 AMER1Q5JTC6 1135 aaPredicted RBP24.11■■□□□ 1.45
FOXN3-204ENST00000553840 TFCP2L1Q9NZI6 479 aa24.11■■□□□ 1.45
FOXN3-204ENST00000553840 DCAF8L1A6NGE4 600 aa24.1■■□□□ 1.45
FOXN3-204ENST00000553840 KCNQ4P56696 695 aa24.1■■□□□ 1.45
FOXN3-204ENST00000553840 SMARCC1Q92922 1105 aaPredicted RBP24.1■■□□□ 1.45
FOXN3-204ENST00000553840 SLC16A10Q8TF71 515 aa24.09■■□□□ 1.45
FOXN3-204ENST00000553840 PHKG2P15735 406 aa24.08■■□□□ 1.45
FOXN3-204ENST00000553840 PALLDQ8WX93 1383 aa24.07■■□□□ 1.44
FOXN3-204ENST00000553840 PTGER2P43116 358 aa24.07■■□□□ 1.44
FOXN3-204ENST00000553840 PLEKHO1Q53GL0 409 aaPredicted RBP24.07■■□□□ 1.44
FOXN3-204ENST00000553840 C5P01031 1676 aa24.06■■□□□ 1.44
FOXN3-204ENST00000553840 PER1O15534 1290 aaPredicted RBP24.06■■□□□ 1.44
FOXN3-204ENST00000553840 TMOD3Q9NYL9 352 aa24.06■■□□□ 1.44
FOXN3-204ENST00000553840 TUBGCP6Q96RT7 1819 aa24.05■■□□□ 1.44
FOXN3-204ENST00000553840 AMOTQ4VCS5 1084 aa24.05■■□□□ 1.44
FOXN3-204ENST00000553840 HSP90AB1P08238 724 aaKnown RBP24.04■■□□□ 1.44
FOXN3-204ENST00000553840 TAF1LQ8IZX4 1826 aa24.04■■□□□ 1.44
FOXN3-204ENST00000553840 PNPLA7Q6ZV29 1317 aa24.04■■□□□ 1.44
FOXN3-204ENST00000553840 CC2D1BQ5T0F9 858 aaKnown RBP24.03■■□□□ 1.44
FOXN3-204ENST00000553840 PIGBQ92521 554 aa24.03■■□□□ 1.44
FOXN3-204ENST00000553840 MTHFSP49914 203 aa24.02■■□□□ 1.44
FOXN3-204ENST00000553840 POLD1P28340 1107 aa24.01■■□□□ 1.43
FOXN3-204ENST00000553840 SGIP1Q9BQI5 828 aa24.01■■□□□ 1.43
FOXN3-204ENST00000553840 MSH5O43196 834 aa24■■□□□ 1.43
FOXN3-204ENST00000553840 IL13P35225 146 aa24■■□□□ 1.43
FOXN3-204ENST00000553840 SULT6B1Q6IMI4 303 aa24■■□□□ 1.43
FOXN3-204ENST00000553840 ZNF530Q6P9A1 599 aaPredicted RBP24■■□□□ 1.43
FOXN3-204ENST00000553840 DCAF5Q96JK2 942 aa24■■□□□ 1.43
FOXN3-204ENST00000553840 ARXQ96QS3 562 aa24■■□□□ 1.43
FOXN3-204ENST00000553840 C1orf141Q5JVX7 400 aa23.99■■□□□ 1.43
FOXN3-204ENST00000553840 FLAD1Q8NFF5 587 aa23.99■■□□□ 1.43
FOXN3-204ENST00000553840 NPC1L1Q9UHC9 1359 aa23.99■■□□□ 1.43
FOXN3-204ENST00000553840 ERVV-2B6SEH9 535 aa23.98■■□□□ 1.43
FOXN3-204ENST00000553840 AEBP1Q8IUX7 1158 aa23.98■■□□□ 1.43
FOXN3-204ENST00000553840 FHDC1Q9C0D6 1143 aaPredicted RBP23.98■■□□□ 1.43
FOXN3-204ENST00000553840 KDRP35968 1356 aa23.97■■□□□ 1.43
FOXN3-204ENST00000553840 C4BP0C0L5 1744 aa23.96■■□□□ 1.43
FOXN3-204ENST00000553840 COL24A1Q17RW2 1714 aa23.96■■□□□ 1.43
FOXN3-204ENST00000553840 SYT17Q9BSW7 474 aa23.96■■□□□ 1.43
FOXN3-204ENST00000553840 LOC102724428A0A0B4J2F2 783 aa23.95■■□□□ 1.42
FOXN3-204ENST00000553840 SIK1P57059 783 aa23.95■■□□□ 1.42
FOXN3-204ENST00000553840 AK7Q96M32 723 aa23.95■■□□□ 1.42
FOXN3-204ENST00000553840 DIAPH1O60610 1272 aaKnown RBP23.94■■□□□ 1.42
FOXN3-204ENST00000553840 CABP4P57796 275 aa23.94■■□□□ 1.42
FOXN3-204ENST00000553840 CNGB1Q14028 1251 aaPredicted RBP23.94■■□□□ 1.42
FOXN3-204ENST00000553840 COL23A1Q86Y22 540 aaPredicted RBP23.94■■□□□ 1.42
FOXN3-204ENST00000553840 ASAP1Q9ULH1 1129 aa23.94■■□□□ 1.42
FOXN3-204ENST00000553840 ATP6V1AP38606 617 aa23.93■■□□□ 1.42
FOXN3-204ENST00000553840 ATG3Q9NT62 314 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms