RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 GPBP1L1Q9HC44 474 aaPredicted RBP7.53□□□□□ -1.2
LINC00648-201ENST00000553747 ENAMQ9NRM1 1142 aa7.53□□□□□ -1.2
LINC00648-201ENST00000553747 IGF1RP08069 1367 aa7.53□□□□□ -1.2
LINC00648-201ENST00000553747 ERVH48-1M5A8F1 160 aa7.52□□□□□ -1.21
LINC00648-201ENST00000553747 NEDD1Q8NHV4 660 aa7.52□□□□□ -1.21
LINC00648-201ENST00000553747 RSPH6AQ9H0K4 717 aa7.52□□□□□ -1.21
LINC00648-201ENST00000553747 PHF20L1A8MW92 1017 aa7.51□□□□□ -1.21
LINC00648-201ENST00000553747 PROCP04070 461 aa7.51□□□□□ -1.21
LINC00648-201ENST00000553747 RIPOR1Q6ZS17 1223 aa7.51□□□□□ -1.21
LINC00648-201ENST00000553747 DDRGK1Q96HY6 314 aa7.51□□□□□ -1.21
LINC00648-201ENST00000553747 MBIPQ9NS73 344 aa7.51□□□□□ -1.21
LINC00648-201ENST00000553747 PTK2Q05397 1052 aa7.5□□□□□ -1.21
LINC00648-201ENST00000553747 DBN1Q16643 649 aa7.5□□□□□ -1.21
LINC00648-201ENST00000553747 GALNT6Q8NCL4 622 aa7.5□□□□□ -1.21
LINC00648-201ENST00000553747 EPS8L1Q8TE68 723 aa7.5□□□□□ -1.21
LINC00648-201ENST00000553747 ACDQ96AP0 544 aa7.5□□□□□ -1.21
LINC00648-201ENST00000553747 CYLDQ9NQC7 956 aa7.5□□□□□ -1.21
LINC00648-201ENST00000553747 BCRP11274 1271 aa7.49□□□□□ -1.21
LINC00648-201ENST00000553747 BEND7Q8N7W2 519 aaPredicted RBP7.49□□□□□ -1.21
LINC00648-201ENST00000553747 GTPBP3Q969Y2 492 aaKnown RBP7.49□□□□□ -1.21
LINC00648-201ENST00000553747 NEUROD2Q15784 382 aa7.48□□□□□ -1.21
LINC00648-201ENST00000553747 PODNQ7Z5L7 613 aa7.48□□□□□ -1.21
LINC00648-201ENST00000553747 KRTAP1-3Q8IUG1 177 aa7.48□□□□□ -1.21
LINC00648-201ENST00000553747 TRIM22Q8IYM9 498 aa7.48□□□□□ -1.21
LINC00648-201ENST00000553747 FAM117AQ9C073 453 aa7.48□□□□□ -1.21
LINC00648-201ENST00000553747 NBPF20Q3BBV1 942 aa7.47□□□□□ -1.21
LINC00648-201ENST00000553747 DZIP3Q86Y13 1208 aaKnown RBP7.47□□□□□ -1.21
LINC00648-201ENST00000553747 PSMG3-AS1Q96PY0 264 aa7.47□□□□□ -1.21
LINC00648-201ENST00000553747 GAS2L1Q99501 681 aaPredicted RBP7.47□□□□□ -1.21
LINC00648-201ENST00000553747 ATP1B4Q9UN42 357 aaPredicted RBP7.47□□□□□ -1.21
LINC00648-201ENST00000553747 RNF144AP50876 292 aaPredicted RBP7.46□□□□□ -1.22
LINC00648-201ENST00000553747 ZC3H4Q9UPT8 1303 aaKnown RBP7.46□□□□□ -1.22
LINC00648-201ENST00000553747 MEN1O00255 615 aa7.45□□□□□ -1.22
LINC00648-201ENST00000553747 FOXR1Q6PIV2 292 aa7.45□□□□□ -1.22
LINC00648-201ENST00000553747 PROCA1Q8NCQ7 364 aaPredicted RBP7.45□□□□□ -1.22
LINC00648-201ENST00000553747 K7ELQ4 463 aaPredicted RBP7.44□□□□□ -1.22
LINC00648-201ENST00000553747 AP1G2O75843 785 aa7.44□□□□□ -1.22
LINC00648-201ENST00000553747 SNRPNP63162 240 aaKnown RBP7.44□□□□□ -1.22
LINC00648-201ENST00000553747 POU4F2Q12837 409 aa7.44□□□□□ -1.22
LINC00648-201ENST00000553747 SKIV2LQ15477 1246 aaKnown RBP7.44□□□□□ -1.22
LINC00648-201ENST00000553747 KRBA1A5PL33 1030 aa7.43□□□□□ -1.22
LINC00648-201ENST00000553747 ESPNB1AK53 854 aa7.43□□□□□ -1.22
LINC00648-201ENST00000553747 SH3D19Q5HYK7 790 aa7.43□□□□□ -1.22
LINC00648-201ENST00000553747 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
LINC00648-201ENST00000553747 GPSM3Q9Y4H4 160 aa7.43□□□□□ -1.22
LINC00648-201ENST00000553747 ATP5J2-PTCD1G3V325 749 aa7.42□□□□□ -1.22
LINC00648-201ENST00000553747 FURINP09958 794 aa7.42□□□□□ -1.22
LINC00648-201ENST00000553747 MX2P20592 715 aa7.42□□□□□ -1.22
LINC00648-201ENST00000553747 BAG6P46379 1132 aa7.42□□□□□ -1.22
LINC00648-201ENST00000553747 GMCL1Q96IK5 515 aa7.42□□□□□ -1.22
LINC00648-201ENST00000553747 BRPF1P55201 1214 aaPredicted RBP7.41□□□□□ -1.22
LINC00648-201ENST00000553747 Q8N3U1 123 aa7.41□□□□□ -1.22
LINC00648-201ENST00000553747 IL27Q8NEV9 243 aa7.41□□□□□ -1.22
LINC00648-201ENST00000553747 TRERF1Q96PN7 1200 aa7.41□□□□□ -1.22
LINC00648-201ENST00000553747 DYRK1BQ9Y463 629 aa7.41□□□□□ -1.22
LINC00648-201ENST00000553747 A0A1W2PRU2 124 aa7.4□□□□□ -1.22
LINC00648-201ENST00000553747 OIP5O43482 229 aa7.4□□□□□ -1.22
LINC00648-201ENST00000553747 SHISA8B8ZZ34 492 aa7.39□□□□□ -1.23
LINC00648-201ENST00000553747 H7C1W4 665 aa7.39□□□□□ -1.23
LINC00648-201ENST00000553747 GIGYF1O75420 1035 aaPredicted RBP7.39□□□□□ -1.23
LINC00648-201ENST00000553747 SLC27A3Q5K4L6 730 aa7.39□□□□□ -1.23
LINC00648-201ENST00000553747 PPP2R2DQ66LE6 453 aa7.39□□□□□ -1.23
LINC00648-201ENST00000553747 PRKCSHP14314 528 aaPredicted RBP7.38□□□□□ -1.23
LINC00648-201ENST00000553747 COL8A1P27658 744 aa7.38□□□□□ -1.23
LINC00648-201ENST00000553747 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
LINC00648-201ENST00000553747 OXCT2Q9BYC2 517 aaPredicted RBP7.38□□□□□ -1.23
LINC00648-201ENST00000553747 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
LINC00648-201ENST00000553747 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
LINC00648-201ENST00000553747 PCMTD1Q96MG8 357 aaPredicted RBP7.37□□□□□ -1.23
LINC00648-201ENST00000553747 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.37□□□□□ -1.23
LINC00648-201ENST00000553747 NUCKS1Q9H1E3 243 aaKnown RBP7.37□□□□□ -1.23
LINC00648-201ENST00000553747 RRAGCQ9HB90 399 aa7.37□□□□□ -1.23
LINC00648-201ENST00000553747 THBS1P07996 1170 aa7.36□□□□□ -1.23
LINC00648-201ENST00000553747 USP17L8P0C7I0 530 aa7.36□□□□□ -1.23
LINC00648-201ENST00000553747 GPC1P35052 558 aa7.36□□□□□ -1.23
LINC00648-201ENST00000553747 NLRP3Q96P20 1036 aa7.36□□□□□ -1.23
LINC00648-201ENST00000553747 GOPCQ9HD26 462 aa7.36□□□□□ -1.23
LINC00648-201ENST00000553747 TIMMDC1Q9NPL8 285 aa7.36□□□□□ -1.23
LINC00648-201ENST00000553747 NSFL1CQ9UNZ2 370 aaKnown RBP7.36□□□□□ -1.23
LINC00648-201ENST00000553747 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
LINC00648-201ENST00000553747 SEPT12Q8IYM1 358 aa7.35□□□□□ -1.23
LINC00648-201ENST00000553747 GRIP2Q9C0E4 1043 aa7.35□□□□□ -1.23
LINC00648-201ENST00000553747 SUV39H2Q9H5I1 410 aa7.35□□□□□ -1.23
LINC00648-201ENST00000553747 GPAMQ9HCL2 828 aa7.35□□□□□ -1.23
LINC00648-201ENST00000553747 GRIN2CQ14957 1233 aa7.34□□□□□ -1.23
LINC00648-201ENST00000553747 PNMA1Q8ND90 353 aa7.34□□□□□ -1.23
LINC00648-201ENST00000553747 KLRG1Q96E93 195 aa7.34□□□□□ -1.23
LINC00648-201ENST00000553747 MKL2Q9ULH7 1088 aa7.34□□□□□ -1.23
LINC00648-201ENST00000553747 F11P03951 625 aa7.33□□□□□ -1.24
LINC00648-201ENST00000553747 PHKA2P46019 1235 aa7.33□□□□□ -1.24
LINC00648-201ENST00000553747 MAP2K3P46734 347 aa7.33□□□□□ -1.24
LINC00648-201ENST00000553747 SCTRP47872 440 aa7.33□□□□□ -1.24
LINC00648-201ENST00000553747 CC2D2BQ6DHV5 1058 aa7.33□□□□□ -1.24
LINC00648-201ENST00000553747 ARHGEF10LQ9HCE6 1279 aa7.33□□□□□ -1.24
LINC00648-201ENST00000553747 RAB6BQ9NRW1 208 aa7.33□□□□□ -1.24
LINC00648-201ENST00000553747 LRRC4BQ9NT99 713 aa7.33□□□□□ -1.24
LINC00648-201ENST00000553747 WASLO00401 505 aaPredicted RBP7.32□□□□□ -1.24
LINC00648-201ENST00000553747 ERVK-9P63128 1117 aa7.32□□□□□ -1.24
LINC00648-201ENST00000553747 TAS1R3Q7RTX0 852 aa7.32□□□□□ -1.24
LINC00648-201ENST00000553747 EDARADDQ8WWZ3 215 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms