RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 TXNRD1Q16881 649 aa25.36■■□□□ 1.65
CLMN-202ENST00000553733 NBPF6Q5VWK0 638 aa25.35■■□□□ 1.65
CLMN-202ENST00000553733 NBPF4Q96M43 638 aa25.35■■□□□ 1.65
CLMN-202ENST00000553733 NCAPD2Q15021 1401 aa25.35■■□□□ 1.65
CLMN-202ENST00000553733 NSD2O96028 1365 aa25.34■■□□□ 1.65
CLMN-202ENST00000553733 HSPA5P11021 654 aaKnown RBP25.34■■□□□ 1.65
CLMN-202ENST00000553733 HSP90AB2PQ58FF8 381 aa25.34■■□□□ 1.65
CLMN-202ENST00000553733 USHBP1Q8N6Y0 703 aa25.34■■□□□ 1.65
CLMN-202ENST00000553733 PDGFDQ9GZP0 370 aaPredicted RBP25.34■■□□□ 1.65
CLMN-202ENST00000553733 EMILIN1Q9Y6C2 1016 aa25.33■■□□□ 1.65
CLMN-202ENST00000553733 DDX54Q8TDD1 881 aaKnown RBP25.31■■□□□ 1.64
CLMN-202ENST00000553733 EIF4G2P78344 907 aaKnown RBP eCLIP25.3■■□□□ 1.64
CLMN-202ENST00000553733 TAF1LQ8IZX4 1826 aa25.3■■□□□ 1.64
CLMN-202ENST00000553733 COL24A1Q17RW2 1714 aa25.29■■□□□ 1.64
CLMN-202ENST00000553733 CGNL1Q0VF96 1302 aa25.28■■□□□ 1.64
CLMN-202ENST00000553733 C5P01031 1676 aa25.27■■□□□ 1.64
CLMN-202ENST00000553733 POLR3GLQ9BT43 218 aa25.27■■□□□ 1.64
CLMN-202ENST00000553733 ZCRB1Q8TBF4 217 aaKnown RBP25.26■■□□□ 1.63
CLMN-202ENST00000553733 LRRC4BQ9NT99 713 aa25.25■■□□□ 1.63
CLMN-202ENST00000553733 SLC15A2Q16348 729 aa25.24■■□□□ 1.63
CLMN-202ENST00000553733 SPON1Q9HCB6 807 aa25.24■■□□□ 1.63
CLMN-202ENST00000553733 ZNF827Q17R98 1081 aa25.23■■□□□ 1.63
CLMN-202ENST00000553733 STK32BQ9NY57 414 aa25.23■■□□□ 1.63
CLMN-202ENST00000553733 WASHC2AQ641Q2 1341 aa25.2■■□□□ 1.62
CLMN-202ENST00000553733 ZBTB7AO95365 584 aa25.2■■□□□ 1.62
CLMN-202ENST00000553733 PRIM1P49642 420 aaKnown RBP25.2■■□□□ 1.62
CLMN-202ENST00000553733 RAPGEF4Q8WZA2 1011 aa25.2■■□□□ 1.62
CLMN-202ENST00000553733 POLKQ9UBT6 870 aa25.2■■□□□ 1.62
CLMN-202ENST00000553733 SYTL4Q96C24 671 aaPredicted RBP25.19■■□□□ 1.62
CLMN-202ENST00000553733 PCDH11XQ9BZA7 1347 aa25.18■■□□□ 1.62
CLMN-202ENST00000553733 PCDH11YQ9BZA8 1340 aa25.18■■□□□ 1.62
CLMN-202ENST00000553733 PPM1GO15355 546 aaPredicted RBP25.18■■□□□ 1.62
CLMN-202ENST00000553733 TATP17735 454 aaPredicted RBP25.18■■□□□ 1.62
CLMN-202ENST00000553733 PTGER2P43116 358 aa25.18■■□□□ 1.62
CLMN-202ENST00000553733 PANK3Q9H999 370 aa25.18■■□□□ 1.62
CLMN-202ENST00000553733 CYP27B1O15528 508 aa25.15■■□□□ 1.62
CLMN-202ENST00000553733 KCNQ4P56696 695 aa25.15■■□□□ 1.62
CLMN-202ENST00000553733 AKT1S1Q96B36 256 aa25.15■■□□□ 1.62
CLMN-202ENST00000553733 TNNT2P45379 298 aaPredicted RBP25.14■■□□□ 1.62
CLMN-202ENST00000553733 EYA1Q99502 592 aa25.14■■□□□ 1.62
CLMN-202ENST00000553733 SLC27A3Q5K4L6 730 aa25.13■■□□□ 1.61
CLMN-202ENST00000553733 SGIP1Q9BQI5 828 aa25.13■■□□□ 1.61
CLMN-202ENST00000553733 PPP1R1BQ9UD71 204 aaPredicted RBP25.13■■□□□ 1.61
CLMN-202ENST00000553733 VIRMAQ69YN4 1812 aaKnown RBP25.13■■□□□ 1.61
CLMN-202ENST00000553733 UBR3Q6ZT12 1888 aa25.13■■□□□ 1.61
CLMN-202ENST00000553733 ATF5Q9Y2D1 282 aaPredicted RBP25.12■■□□□ 1.61
CLMN-202ENST00000553733 C4BP0C0L5 1744 aa25.12■■□□□ 1.61
CLMN-202ENST00000553733 EIF4A2Q14240 407 aaKnown RBP25.11■■□□□ 1.61
CLMN-202ENST00000553733 KIF7Q2M1P5 1343 aa25.11■■□□□ 1.61
CLMN-202ENST00000553733 MTFR1LQ9H019 292 aa25.1■■□□□ 1.61
CLMN-202ENST00000553733 PNPLA7Q6ZV29 1317 aa25.1■■□□□ 1.61
CLMN-202ENST00000553733 IGSF1Q8N6C5 1336 aa25.08■■□□□ 1.6
CLMN-202ENST00000553733 PALLDQ8WX93 1383 aa25.06■■□□□ 1.6
CLMN-202ENST00000553733 CCNL1Q9UK58 526 aaPredicted RBP25.06■■□□□ 1.6
CLMN-202ENST00000553733 PLEKHG2Q9H7P9 1386 aa25.05■■□□□ 1.6
CLMN-202ENST00000553733 NKX1-1Q15270 411 aaPredicted RBP25.03■■□□□ 1.6
CLMN-202ENST00000553733 COL5A3P25940 1745 aaPredicted RBP25.03■■□□□ 1.6
CLMN-202ENST00000553733 SCN11AQ9UI33 1791 aa25.03■■□□□ 1.6
CLMN-202ENST00000553733 AMER1Q5JTC6 1135 aaPredicted RBP25.02■■□□□ 1.6
CLMN-202ENST00000553733 MPRIPQ6WCQ1 1025 aa25.02■■□□□ 1.6
CLMN-202ENST00000553733 CHD4Q14839 1912 aa25.02■■□□□ 1.6
CLMN-202ENST00000553733 ZNF831Q5JPB2 1677 aa25.01■■□□□ 1.59
CLMN-202ENST00000553733 FHDC1Q9C0D6 1143 aaPredicted RBP25■■□□□ 1.59
CLMN-202ENST00000553733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25■■□□□ 1.59
CLMN-202ENST00000553733 SPG7Q9UQ90 795 aa25■■□□□ 1.59
CLMN-202ENST00000553733 UTRNP46939 3433 aa25■■□□□ 1.59
CLMN-202ENST00000553733 PHKG2P15735 406 aa24.99■■□□□ 1.59
CLMN-202ENST00000553733 MORC1Q86VD1 984 aa24.99■■□□□ 1.59
CLMN-202ENST00000553733 MAP3K5Q99683 1374 aa24.98■■□□□ 1.59
CLMN-202ENST00000553733 PIGBQ92521 554 aa24.98■■□□□ 1.59
CLMN-202ENST00000553733 TFCP2L1Q9NZI6 479 aa24.98■■□□□ 1.59
CLMN-202ENST00000553733 KNSTRNQ9Y448 316 aa24.98■■□□□ 1.59
CLMN-202ENST00000553733 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
CLMN-202ENST00000553733 AEBP1Q8IUX7 1158 aa24.96■■□□□ 1.59
CLMN-202ENST00000553733 SYT17Q9BSW7 474 aa24.96■■□□□ 1.59
CLMN-202ENST00000553733 KDRP35968 1356 aa24.95■■□□□ 1.59
CLMN-202ENST00000553733 ARXQ96QS3 562 aa24.95■■□□□ 1.58
CLMN-202ENST00000553733 IFNL2Q8IZJ0 200 aa24.94■■□□□ 1.58
CLMN-202ENST00000553733 SLC16A10Q8TF71 515 aa24.94■■□□□ 1.58
CLMN-202ENST00000553733 CICQ96RK0 1608 aaPredicted RBP24.94■■□□□ 1.58
CLMN-202ENST00000553733 PER1O15534 1290 aaPredicted RBP24.93■■□□□ 1.58
CLMN-202ENST00000553733 AMIGO3Q86WK7 504 aa24.93■■□□□ 1.58
CLMN-202ENST00000553733 COL23A1Q86Y22 540 aaPredicted RBP24.93■■□□□ 1.58
CLMN-202ENST00000553733 C4AP0C0L4 1744 aa24.92■■□□□ 1.58
CLMN-202ENST00000553733 TJP1Q07157 1748 aa24.92■■□□□ 1.58
CLMN-202ENST00000553733 COL3A1P02461 1466 aaPredicted RBP24.92■■□□□ 1.58
CLMN-202ENST00000553733 MYH14Q7Z406 1995 aaKnown RBP24.92■■□□□ 1.58
CLMN-202ENST00000553733 ADAMTS7Q9UKP4 1686 aa24.91■■□□□ 1.58
CLMN-202ENST00000553733 SMARCC1Q92922 1105 aaPredicted RBP24.9■■□□□ 1.58
CLMN-202ENST00000553733 TMOD3Q9NYL9 352 aa24.9■■□□□ 1.58
CLMN-202ENST00000553733 IL13P35225 146 aa24.89■■□□□ 1.58
CLMN-202ENST00000553733 ASAP1Q9ULH1 1129 aa24.89■■□□□ 1.58
CLMN-202ENST00000553733 LOC102724428A0A0B4J2F2 783 aa24.87■■□□□ 1.57
CLMN-202ENST00000553733 SIK1P57059 783 aa24.87■■□□□ 1.57
CLMN-202ENST00000553733 LINC00116Q8NCU8 138 aa24.87■■□□□ 1.57
CLMN-202ENST00000553733 ITPK1Q13572 414 aa24.86■■□□□ 1.57
CLMN-202ENST00000553733 MRC1P22897 1456 aa24.85■■□□□ 1.57
CLMN-202ENST00000553733 MSL1Q68DK7 614 aa24.85■■□□□ 1.57
CLMN-202ENST00000553733 SULT6B1Q6IMI4 303 aa24.85■■□□□ 1.57
CLMN-202ENST00000553733 ZNF530Q6P9A1 599 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms