RNA–Protein interactions for RNA: ENST00000553681.5

APEX1-206, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-206ENST00000553681 NLGN2Q8NFZ4 835 aa15.91■□□□□ 0.14
APEX1-206ENST00000553681 FAM208AQ9UK61 1670 aaKnown RBP15.91■□□□□ 0.14
APEX1-206ENST00000553681 MSH5O43196 834 aa15.9■□□□□ 0.14
APEX1-206ENST00000553681 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
APEX1-206ENST00000553681 TFCP2L1Q9NZI6 479 aa15.9■□□□□ 0.14
APEX1-206ENST00000553681 UTRNP46939 3433 aa15.9■□□□□ 0.14
APEX1-206ENST00000553681 COG3Q96JB2 828 aa15.89■□□□□ 0.13
APEX1-206ENST00000553681 PCGF6Q9BYE7 350 aa15.89■□□□□ 0.13
APEX1-206ENST00000553681 GGNBP2Q9H3C7 697 aa15.89■□□□□ 0.13
APEX1-206ENST00000553681 NSD2O96028 1365 aa15.88■□□□□ 0.13
APEX1-206ENST00000553681 TESK2Q96S53 571 aa15.88■□□□□ 0.13
APEX1-206ENST00000553681 SENP3-EIF4A1A0A087X0R7 540 aa15.87■□□□□ 0.13
APEX1-206ENST00000553681 SMIM5Q71RC9 77 aa15.87■□□□□ 0.13
APEX1-206ENST00000553681 WWC3Q9ULE0 1092 aa15.87■□□□□ 0.13
APEX1-206ENST00000553681 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
APEX1-206ENST00000553681 ZCRB1Q8TBF4 217 aaKnown RBP15.86■□□□□ 0.13
APEX1-206ENST00000553681 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
APEX1-206ENST00000553681 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
APEX1-206ENST00000553681 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
APEX1-206ENST00000553681 LY75O60449 1722 aa15.85■□□□□ 0.13
APEX1-206ENST00000553681 POLD1P28340 1107 aa15.84■□□□□ 0.13
APEX1-206ENST00000553681 QSER1Q2KHR3 1735 aa15.84■□□□□ 0.13
APEX1-206ENST00000553681 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.12
APEX1-206ENST00000553681 COL23A1Q86Y22 540 aaPredicted RBP15.83■□□□□ 0.12
APEX1-206ENST00000553681 YBX3P16989 372 aaKnown RBP eCLIP15.82■□□□□ 0.126e-9■■□□□ 12.6
APEX1-206ENST00000553681 HSP90AB2PQ58FF8 381 aa15.82■□□□□ 0.12
APEX1-206ENST00000553681 FYB1O15117 783 aa15.81■□□□□ 0.12
APEX1-206ENST00000553681 C1QTNF8P60827 252 aa15.81■□□□□ 0.12
APEX1-206ENST00000553681 MAP3K5Q99683 1374 aa15.81■□□□□ 0.12
APEX1-206ENST00000553681 USP47Q96K76 1375 aa15.8■□□□□ 0.12
APEX1-206ENST00000553681 COL24A1Q17RW2 1714 aa15.8■□□□□ 0.12
APEX1-206ENST00000553681 MPRIPQ6WCQ1 1025 aa15.79■□□□□ 0.12
APEX1-206ENST00000553681 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
APEX1-206ENST00000553681 RAPGEF4Q8WZA2 1011 aa15.79■□□□□ 0.12
APEX1-206ENST00000553681 KIF20BQ96Q89 1820 aa15.79■□□□□ 0.12
APEX1-206ENST00000553681 TOGARAM1Q9Y4F4 1720 aa15.79■□□□□ 0.12
APEX1-206ENST00000553681 C5P01031 1676 aa15.79■□□□□ 0.12
APEX1-206ENST00000553681 PHF14O94880 888 aa15.78■□□□□ 0.12
APEX1-206ENST00000553681 SLC16A10Q8TF71 515 aa15.78■□□□□ 0.12
APEX1-206ENST00000553681 EMILIN1Q9Y6C2 1016 aa15.78■□□□□ 0.12
APEX1-206ENST00000553681 PPM1GO15355 546 aaPredicted RBP15.77■□□□□ 0.12
APEX1-206ENST00000553681 TATP17735 454 aaPredicted RBP15.77■□□□□ 0.12
APEX1-206ENST00000553681 ITGB4P16144 1822 aa15.76■□□□□ 0.11
APEX1-206ENST00000553681 TAF1LQ8IZX4 1826 aa15.76■□□□□ 0.11
APEX1-206ENST00000553681 PUS7Q96PZ0 661 aaKnown RBP15.76■□□□□ 0.11
APEX1-206ENST00000553681 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
APEX1-206ENST00000553681 PALLDQ8WX93 1383 aa15.75■□□□□ 0.11
APEX1-206ENST00000553681 GOLGB1Q14789 3259 aaKnown RBP15.75■□□□□ 0.11
APEX1-206ENST00000553681 CYP27B1O15528 508 aa15.75■□□□□ 0.11
APEX1-206ENST00000553681 GIGYF1O75420 1035 aaPredicted RBP15.75■□□□□ 0.11
APEX1-206ENST00000553681 ZNF526Q8TF50 670 aaPredicted RBP15.75■□□□□ 0.11
APEX1-206ENST00000553681 SMG6Q86US8 1419 aaKnown RBP15.75■□□□□ 0.11
APEX1-206ENST00000553681 TMF1P82094 1093 aa15.74■□□□□ 0.11
APEX1-206ENST00000553681 CARD14Q9BXL6 1004 aa15.74■□□□□ 0.11
APEX1-206ENST00000553681 POLR3GLQ9BT43 218 aa15.73■□□□□ 0.11
APEX1-206ENST00000553681 NSD3Q9BZ95 1437 aa15.73■□□□□ 0.11
APEX1-206ENST00000553681 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
APEX1-206ENST00000553681 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
APEX1-206ENST00000553681 INSRP06213 1382 aa15.72■□□□□ 0.11
APEX1-206ENST00000553681 C4BP0C0L5 1744 aa15.71■□□□□ 0.11
APEX1-206ENST00000553681 FLT4P35916 1363 aa15.71■□□□□ 0.11
APEX1-206ENST00000553681 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
APEX1-206ENST00000553681 PIGBQ92521 554 aa15.7■□□□□ 0.1
APEX1-206ENST00000553681 AK7Q96M32 723 aa15.7■□□□□ 0.1
APEX1-206ENST00000553681 ATP10DQ9P241 1426 aa15.69■□□□□ 0.1
APEX1-206ENST00000553681 LINC00116Q8NCU8 138 aa15.69■□□□□ 0.1
APEX1-206ENST00000553681 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
APEX1-206ENST00000553681 PKD1L3Q7Z443 1732 aa15.68■□□□□ 0.1
APEX1-206ENST00000553681 MAP2P11137 1827 aaKnown RBP15.68■□□□□ 0.1
APEX1-206ENST00000553681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
APEX1-206ENST00000553681 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
APEX1-206ENST00000553681 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
APEX1-206ENST00000553681 ITPK1Q13572 414 aa15.66■□□□□ 0.1
APEX1-206ENST00000553681 EYA1Q99502 592 aa15.66■□□□□ 0.1
APEX1-206ENST00000553681 IGSF1Q8N6C5 1336 aa15.66■□□□□ 0.1
APEX1-206ENST00000553681 GRIN3BO60391 1043 aa15.65■□□□□ 0.1
APEX1-206ENST00000553681 LOC102724428A0A0B4J2F2 783 aa15.64■□□□□ 0.09
APEX1-206ENST00000553681 GNPATO15228 680 aa15.64■□□□□ 0.09
APEX1-206ENST00000553681 SIK1P57059 783 aa15.64■□□□□ 0.09
APEX1-206ENST00000553681 CD2APQ9Y5K6 639 aa15.63■□□□□ 0.09
APEX1-206ENST00000553681 ATP6V1AP38606 617 aa15.62■□□□□ 0.09
APEX1-206ENST00000553681 SMARCC1Q92922 1105 aaPredicted RBP15.62■□□□□ 0.09
APEX1-206ENST00000553681 GPBP1L1Q9HC44 474 aaPredicted RBP15.62■□□□□ 0.09
APEX1-206ENST00000553681 TMOD3Q9NYL9 352 aa15.62■□□□□ 0.09
APEX1-206ENST00000553681 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
APEX1-206ENST00000553681 ANKRD26Q9UPS8 1709 aa15.61■□□□□ 0.09
APEX1-206ENST00000553681 POLKQ9UBT6 870 aa15.61■□□□□ 0.09
APEX1-206ENST00000553681 N4BP2Q86UW6 1770 aaPredicted RBP15.61■□□□□ 0.09
APEX1-206ENST00000553681 PHKG2P15735 406 aa15.6■□□□□ 0.09
APEX1-206ENST00000553681 EIF4A2Q14240 407 aaKnown RBP15.6■□□□□ 0.09
APEX1-206ENST00000553681 FLAD1Q8NFF5 587 aa15.6■□□□□ 0.09
APEX1-206ENST00000553681 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
APEX1-206ENST00000553681 ATG3Q9NT62 314 aa15.6■□□□□ 0.09
APEX1-206ENST00000553681 MMP10P09238 476 aa15.59■□□□□ 0.09
APEX1-206ENST00000553681 NCAPD2Q15021 1401 aa15.59■□□□□ 0.09
APEX1-206ENST00000553681 SLC24A1O60721 1099 aa15.58■□□□□ 0.08
APEX1-206ENST00000553681 NKX1-1Q15270 411 aaPredicted RBP15.58■□□□□ 0.08
APEX1-206ENST00000553681 CDCA8Q53HL2 280 aa15.58■□□□□ 0.08
APEX1-206ENST00000553681 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.08
APEX1-206ENST00000553681 WASHC2AQ641Q2 1341 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms