RNA–Protein interactions for RNA: ENST00000553618.1

AL135978.1-201, humanhuman

BASIC

Gene AL135978.1, Length 1,266 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL135978.1-201ENST00000553618 RGPD4Q7Z3J3 1758 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 IL2RBP14784 551 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 ZNF827Q17R98 1081 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 NLGN2Q8NFZ4 835 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 MTFR1LQ9H019 292 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 USP54Q70EL1 1684 aa9.74□□□□□ -0.85
AL135978.1-201ENST00000553618 RGPD5Q99666 1765 aa9.73□□□□□ -0.85
AL135978.1-201ENST00000553618 ACSBG1Q96GR2 724 aa9.73□□□□□ -0.85
AL135978.1-201ENST00000553618 POLR3GLQ9BT43 218 aa9.73□□□□□ -0.85
AL135978.1-201ENST00000553618 PANK3Q9H999 370 aa9.73□□□□□ -0.85
AL135978.1-201ENST00000553618 BCL9O00512 1426 aa9.73□□□□□ -0.85
AL135978.1-201ENST00000553618 NSD3Q9BZ95 1437 aa9.72□□□□□ -0.85
AL135978.1-201ENST00000553618 ABCC6O95255 1503 aa9.72□□□□□ -0.85
AL135978.1-201ENST00000553618 YBX3P16989 372 aaKnown RBP eCLIP9.71□□□□□ -0.86
AL135978.1-201ENST00000553618 KCNQ4P56696 695 aa9.71□□□□□ -0.86
AL135978.1-201ENST00000553618 LRRC4BQ9NT99 713 aa9.71□□□□□ -0.86
AL135978.1-201ENST00000553618 EMILIN1Q9Y6C2 1016 aa9.71□□□□□ -0.86
AL135978.1-201ENST00000553618 MIER1Q8N108 512 aa9.7□□□□□ -0.86
AL135978.1-201ENST00000553618 DDX54Q8TDD1 881 aaKnown RBP9.7□□□□□ -0.86
AL135978.1-201ENST00000553618 POLKQ9UBT6 870 aa9.7□□□□□ -0.86
AL135978.1-201ENST00000553618 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
AL135978.1-201ENST00000553618 KAT6BQ8WYB5 2073 aa9.7□□□□□ -0.86
AL135978.1-201ENST00000553618 INSRP06213 1382 aa9.69□□□□□ -0.86
AL135978.1-201ENST00000553618 WASHC2AQ641Q2 1341 aa9.69□□□□□ -0.86
AL135978.1-201ENST00000553618 USHBP1Q8N6Y0 703 aa9.69□□□□□ -0.86
AL135978.1-201ENST00000553618 WNK3Q9BYP7 1800 aa9.69□□□□□ -0.86
AL135978.1-201ENST00000553618 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
AL135978.1-201ENST00000553618 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
AL135978.1-201ENST00000553618 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
AL135978.1-201ENST00000553618 LTN1O94822 1766 aa9.68□□□□□ -0.86
AL135978.1-201ENST00000553618 PAPPAQ13219 1627 aa9.67□□□□□ -0.86
AL135978.1-201ENST00000553618 RTL1A6NKG5 1358 aa9.67□□□□□ -0.86
AL135978.1-201ENST00000553618 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
AL135978.1-201ENST00000553618 MAP3K5Q99683 1374 aa9.67□□□□□ -0.86
AL135978.1-201ENST00000553618 KIF7Q2M1P5 1343 aa9.67□□□□□ -0.86
AL135978.1-201ENST00000553618 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
AL135978.1-201ENST00000553618 TNNT2P45379 298 aaPredicted RBP9.67□□□□□ -0.86
AL135978.1-201ENST00000553618 TNS2Q63HR2 1409 aa9.66□□□□□ -0.86
AL135978.1-201ENST00000553618 FLT4P35916 1363 aa9.66□□□□□ -0.86
AL135978.1-201ENST00000553618 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
AL135978.1-201ENST00000553618 EYA1Q99502 592 aa9.66□□□□□ -0.86
AL135978.1-201ENST00000553618 ATP10DQ9P241 1426 aa9.65□□□□□ -0.86
AL135978.1-201ENST00000553618 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.86
AL135978.1-201ENST00000553618 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
AL135978.1-201ENST00000553618 WWC3Q9ULE0 1092 aa9.65□□□□□ -0.86
AL135978.1-201ENST00000553618 BTAF1O14981 1849 aa9.65□□□□□ -0.86
AL135978.1-201ENST00000553618 PNPLA7Q6ZV29 1317 aa9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 CYP27B1O15528 508 aa9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 PIAS4Q8N2W9 510 aaPredicted RBP9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 KNSTRNQ9Y448 316 aa9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 MEGF6O75095 1541 aa9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 NHSQ6T4R5 1651 aa9.64□□□□□ -0.87
AL135978.1-201ENST00000553618 HSPA6P17066 643 aa9.63□□□□□ -0.87
AL135978.1-201ENST00000553618 EIF4A2Q14240 407 aaKnown RBP9.63□□□□□ -0.87
AL135978.1-201ENST00000553618 MSL1Q68DK7 614 aa9.63□□□□□ -0.87
AL135978.1-201ENST00000553618 MORC1Q86VD1 984 aa9.63□□□□□ -0.87
AL135978.1-201ENST00000553618 CAPN15O75808 1086 aa9.62□□□□□ -0.87
AL135978.1-201ENST00000553618 SYTL4Q96C24 671 aaPredicted RBP9.62□□□□□ -0.87
AL135978.1-201ENST00000553618 FAM208AQ9UK61 1670 aaKnown RBP9.61□□□□□ -0.87
AL135978.1-201ENST00000553618 RGPD2P0DJD1 1756 aa9.61□□□□□ -0.87
AL135978.1-201ENST00000553618 NKX1-1Q15270 411 aaPredicted RBP9.61□□□□□ -0.87
AL135978.1-201ENST00000553618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.61□□□□□ -0.87
AL135978.1-201ENST00000553618 SMG6Q86US8 1419 aaKnown RBP9.61□□□□□ -0.87
AL135978.1-201ENST00000553618 COL24A1Q17RW2 1714 aa9.6□□□□□ -0.87
AL135978.1-201ENST00000553618 NCAPD2Q15021 1401 aa9.6□□□□□ -0.87
AL135978.1-201ENST00000553618 POLD1P28340 1107 aa9.6□□□□□ -0.87
AL135978.1-201ENST00000553618 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
AL135978.1-201ENST00000553618 NSD2O96028 1365 aa9.6□□□□□ -0.87
AL135978.1-201ENST00000553618 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.87
AL135978.1-201ENST00000553618 IL13P35225 146 aa9.59□□□□□ -0.87
AL135978.1-201ENST00000553618 CC2D1BQ5T0F9 858 aaKnown RBP9.59□□□□□ -0.87
AL135978.1-201ENST00000553618 SMIM5Q71RC9 77 aa9.59□□□□□ -0.87
AL135978.1-201ENST00000553618 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
AL135978.1-201ENST00000553618 TFCP2L1Q9NZI6 479 aa9.59□□□□□ -0.87
AL135978.1-201ENST00000553618 SPG7Q9UQ90 795 aa9.59□□□□□ -0.87
AL135978.1-201ENST00000553618 MAP2P11137 1827 aaKnown RBP9.59□□□□□ -0.88
AL135978.1-201ENST00000553618 IGSF1Q8N6C5 1336 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 PCDH11XQ9BZA7 1347 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 PCDH11YQ9BZA8 1340 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 MSH5O43196 834 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 MTHFSP49914 203 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 HTRA3P83110 453 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 SLC27A3Q5K4L6 730 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 MPRIPQ6WCQ1 1025 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 DNAJC5GQ8N7S2 189 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 PIGBQ92521 554 aa9.58□□□□□ -0.88
AL135978.1-201ENST00000553618 KIF3CO14782 793 aa9.57□□□□□ -0.88
AL135978.1-201ENST00000553618 GRIN3BO60391 1043 aa9.57□□□□□ -0.88
AL135978.1-201ENST00000553618 PHKG2P15735 406 aa9.57□□□□□ -0.88
AL135978.1-201ENST00000553618 COL13A1Q5TAT6 717 aaPredicted RBP9.57□□□□□ -0.88
AL135978.1-201ENST00000553618 AEBP1Q8IUX7 1158 aa9.57□□□□□ -0.88
AL135978.1-201ENST00000553618 IFNL2Q8IZJ0 200 aa9.57□□□□□ -0.88
AL135978.1-201ENST00000553618 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms