RNA–Protein interactions for RNA: ENST00000553497.1

SUSD6-202, Transcript of sushi domain containing 6, humanhuman

TSL 3

Gene SUSD6, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD6-202ENST00000553497 PRIM1P49642 420 aaKnown RBP24.95■■□□□ 1.58
SUSD6-202ENST00000553497 MEGF6O75095 1541 aa24.95■■□□□ 1.58
SUSD6-202ENST00000553497 SYTL4Q96C24 671 aaPredicted RBP24.94■■□□□ 1.58
SUSD6-202ENST00000553497 COG3Q96JB2 828 aa24.94■■□□□ 1.58
SUSD6-202ENST00000553497 TESK2Q96S53 571 aa24.94■■□□□ 1.58
SUSD6-202ENST00000553497 TONSLQ96HA7 1378 aa24.93■■□□□ 1.58
SUSD6-202ENST00000553497 POLD1P28340 1107 aa24.92■■□□□ 1.58
SUSD6-202ENST00000553497 GPR162Q16538 588 aa24.92■■□□□ 1.58
SUSD6-202ENST00000553497 TFCP2L1Q9NZI6 479 aa24.92■■□□□ 1.58
SUSD6-202ENST00000553497 KLHL34Q8N239 644 aa24.91■■□□□ 1.58
SUSD6-202ENST00000553497 AMPHP49418 695 aa24.9■■□□□ 1.58
SUSD6-202ENST00000553497 ZCRB1Q8TBF4 217 aaKnown RBP24.9■■□□□ 1.58
SUSD6-202ENST00000553497 ST20-MTHFSA0A0A6YYL1 179 aa24.89■■□□□ 1.58
SUSD6-202ENST00000553497 RTL1A6NKG5 1358 aa24.88■■□□□ 1.57
SUSD6-202ENST00000553497 C1QTNF8P60827 252 aa24.87■■□□□ 1.57
SUSD6-202ENST00000553497 C5P01031 1676 aa24.87■■□□□ 1.57
SUSD6-202ENST00000553497 NLGN2Q8NFZ4 835 aa24.86■■□□□ 1.57
SUSD6-202ENST00000553497 TAF1LQ8IZX4 1826 aa24.85■■□□□ 1.57
SUSD6-202ENST00000553497 KIF20BQ96Q89 1820 aa24.85■■□□□ 1.57
SUSD6-202ENST00000553497 NBPF6Q5VWK0 638 aa24.85■■□□□ 1.57
SUSD6-202ENST00000553497 NBPF4Q96M43 638 aa24.85■■□□□ 1.57
SUSD6-202ENST00000553497 CCNL1Q9UK58 526 aaPredicted RBP24.85■■□□□ 1.57
SUSD6-202ENST00000553497 SENP3-EIF4A1A0A087X0R7 540 aa24.84■■□□□ 1.57
SUSD6-202ENST00000553497 RRS1Q15050 365 aaKnown RBP24.84■■□□□ 1.57
SUSD6-202ENST00000553497 PELP1Q8IZL8 1130 aaKnown RBP24.84■■□□□ 1.57
SUSD6-202ENST00000553497 USP47Q96K76 1375 aa24.83■■□□□ 1.57
SUSD6-202ENST00000553497 USHBP1Q8N6Y0 703 aa24.83■■□□□ 1.57
SUSD6-202ENST00000553497 FYB1O15117 783 aa24.81■■□□□ 1.56
SUSD6-202ENST00000553497 COL23A1Q86Y22 540 aaPredicted RBP24.81■■□□□ 1.56
SUSD6-202ENST00000553497 CGNL1Q0VF96 1302 aa24.81■■□□□ 1.56
SUSD6-202ENST00000553497 ITGB4P16144 1822 aa24.8■■□□□ 1.56
SUSD6-202ENST00000553497 GGNBP2Q9H3C7 697 aa24.8■■□□□ 1.56
SUSD6-202ENST00000553497 SMG6Q86US8 1419 aaKnown RBP24.79■■□□□ 1.56
SUSD6-202ENST00000553497 TOGARAM1Q9Y4F4 1720 aa24.79■■□□□ 1.56
SUSD6-202ENST00000553497 SLC24A1O60721 1099 aa24.79■■□□□ 1.56
SUSD6-202ENST00000553497 MSH5O43196 834 aa24.78■■□□□ 1.56
SUSD6-202ENST00000553497 RAPGEF4Q8WZA2 1011 aa24.78■■□□□ 1.56
SUSD6-202ENST00000553497 YBX3P16989 372 aaKnown RBP eCLIP24.77■■□□□ 1.56
SUSD6-202ENST00000553497 PKD1L3Q7Z443 1732 aa24.75■■□□□ 1.55
SUSD6-202ENST00000553497 GIGYF1O75420 1035 aaPredicted RBP24.75■■□□□ 1.55
SUSD6-202ENST00000553497 TATP17735 454 aaPredicted RBP24.75■■□□□ 1.55
SUSD6-202ENST00000553497 MSL1Q68DK7 614 aa24.75■■□□□ 1.55
SUSD6-202ENST00000553497 INSRP06213 1382 aa24.75■■□□□ 1.55
SUSD6-202ENST00000553497 HSP90AB2PQ58FF8 381 aa24.74■■□□□ 1.55
SUSD6-202ENST00000553497 PCDH11XQ9BZA7 1347 aa24.74■■□□□ 1.55
SUSD6-202ENST00000553497 PCDH11YQ9BZA8 1340 aa24.74■■□□□ 1.55
SUSD6-202ENST00000553497 C4BP0C0L5 1744 aa24.74■■□□□ 1.55
SUSD6-202ENST00000553497 FLT4P35916 1363 aa24.72■■□□□ 1.55
SUSD6-202ENST00000553497 PALLDQ8WX93 1383 aa24.72■■□□□ 1.55
SUSD6-202ENST00000553497 TMF1P82094 1093 aa24.72■■□□□ 1.55
SUSD6-202ENST00000553497 UBR3Q6ZT12 1888 aa24.72■■□□□ 1.55
SUSD6-202ENST00000553497 CEP350Q5VT06 3117 aa24.72■■□□□ 1.55
SUSD6-202ENST00000553497 GRIN3BO60391 1043 aa24.71■■□□□ 1.55
SUSD6-202ENST00000553497 KIF24Q5T7B8 1368 aa24.7■■□□□ 1.55
SUSD6-202ENST00000553497 ANKRD26Q9UPS8 1709 aa24.69■■□□□ 1.54
SUSD6-202ENST00000553497 CYP27B1O15528 508 aa24.69■■□□□ 1.54
SUSD6-202ENST00000553497 MPRIPQ6WCQ1 1025 aa24.69■■□□□ 1.54
SUSD6-202ENST00000553497 MAP2P11137 1827 aaKnown RBP24.68■■□□□ 1.54
SUSD6-202ENST00000553497 FLAD1Q8NFF5 587 aa24.67■■□□□ 1.54
SUSD6-202ENST00000553497 CD2APQ9Y5K6 639 aa24.66■■□□□ 1.54
SUSD6-202ENST00000553497 NCAPD2Q15021 1401 aa24.66■■□□□ 1.54
SUSD6-202ENST00000553497 AMIGO3Q86WK7 504 aa24.65■■□□□ 1.54
SUSD6-202ENST00000553497 HMGB2P26583 209 aaKnown RBP24.64■■□□□ 1.54
SUSD6-202ENST00000553497 EMILIN1Q9Y6C2 1016 aa24.64■■□□□ 1.54
SUSD6-202ENST00000553497 ATP10DQ9P241 1426 aa24.63■■□□□ 1.53
SUSD6-202ENST00000553497 CARD14Q9BXL6 1004 aa24.63■■□□□ 1.53
SUSD6-202ENST00000553497 SMARCC1Q92922 1105 aaPredicted RBP24.62■■□□□ 1.53
SUSD6-202ENST00000553497 AK7Q96M32 723 aa24.62■■□□□ 1.53
SUSD6-202ENST00000553497 NSD3Q9BZ95 1437 aa24.61■■□□□ 1.53
SUSD6-202ENST00000553497 SMIM5Q71RC9 77 aa24.61■■□□□ 1.53
SUSD6-202ENST00000553497 PIGBQ92521 554 aa24.61■■□□□ 1.53
SUSD6-202ENST00000553497 CDCA8Q53HL2 280 aa24.6■■□□□ 1.53
SUSD6-202ENST00000553497 NKX1-1Q15270 411 aaPredicted RBP24.59■■□□□ 1.53
SUSD6-202ENST00000553497 ADCY9O60503 1353 aa24.58■■□□□ 1.53
SUSD6-202ENST00000553497 PHF14O94880 888 aa24.58■■□□□ 1.53
SUSD6-202ENST00000553497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.57■■□□□ 1.52
SUSD6-202ENST00000553497 LINC00116Q8NCU8 138 aa24.56■■□□□ 1.52
SUSD6-202ENST00000553497 LOC102724428A0A0B4J2F2 783 aa24.55■■□□□ 1.52
SUSD6-202ENST00000553497 PPM1GO15355 546 aaPredicted RBP24.55■■□□□ 1.52
SUSD6-202ENST00000553497 SIK1P57059 783 aa24.55■■□□□ 1.52
SUSD6-202ENST00000553497 SPG7Q9UQ90 795 aa24.55■■□□□ 1.52
SUSD6-202ENST00000553497 IGSF1Q8N6C5 1336 aa24.55■■□□□ 1.52
SUSD6-202ENST00000553497 SSFA2P28290 1259 aa24.54■■□□□ 1.52
SUSD6-202ENST00000553497 EYA1Q99502 592 aa24.54■■□□□ 1.52
SUSD6-202ENST00000553497 WASHC2AQ641Q2 1341 aa24.54■■□□□ 1.52
SUSD6-202ENST00000553497 GPBP1L1Q9HC44 474 aaPredicted RBP24.53■■□□□ 1.52
SUSD6-202ENST00000553497 KIF13BQ9NQT8 1826 aa24.52■■□□□ 1.52
SUSD6-202ENST00000553497 WWC3Q9ULE0 1092 aa24.52■■□□□ 1.52
SUSD6-202ENST00000553497 ITPK1Q13572 414 aa24.51■■□□□ 1.51
SUSD6-202ENST00000553497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.51■■□□□ 1.51
SUSD6-202ENST00000553497 TMOD3Q9NYL9 352 aa24.51■■□□□ 1.51
SUSD6-202ENST00000553497 ASAP1Q9ULH1 1129 aa24.51■■□□□ 1.51
SUSD6-202ENST00000553497 KIAA1551Q9HCM1 1747 aa24.51■■□□□ 1.51
SUSD6-202ENST00000553497 PHKG2P15735 406 aa24.49■■□□□ 1.51
SUSD6-202ENST00000553497 ZNF526Q8TF50 670 aaPredicted RBP24.49■■□□□ 1.51
SUSD6-202ENST00000553497 CICQ96RK0 1608 aaPredicted RBP24.49■■□□□ 1.51
SUSD6-202ENST00000553497 GNPATO15228 680 aa24.48■■□□□ 1.51
SUSD6-202ENST00000553497 N4BP2Q86UW6 1770 aaPredicted RBP24.48■■□□□ 1.51
SUSD6-202ENST00000553497 IFNL2Q8IZJ0 200 aa24.48■■□□□ 1.51
SUSD6-202ENST00000553497 POLKQ9UBT6 870 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms