RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 FAM208AQ9UK61 1670 aaKnown RBP14.45□□□□□ -0.1
IFT43-205ENST00000553438 NSD2O96028 1365 aa14.45□□□□□ -0.1
IFT43-205ENST00000553438 MAP3K19Q56UN5 1328 aa14.44□□□□□ -0.1
IFT43-205ENST00000553438 HOXC9P31274 260 aa14.44□□□□□ -0.1
IFT43-205ENST00000553438 ZCRB1Q8TBF4 217 aaKnown RBP14.44□□□□□ -0.1
IFT43-205ENST00000553438 PUS7Q96PZ0 661 aaKnown RBP14.44□□□□□ -0.1
IFT43-205ENST00000553438 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
IFT43-205ENST00000553438 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
IFT43-205ENST00000553438 AMPHP49418 695 aa14.43□□□□□ -0.1
IFT43-205ENST00000553438 COG3Q96JB2 828 aa14.43□□□□□ -0.1
IFT43-205ENST00000553438 MEGF6O75095 1541 aa14.42□□□□□ -0.1
IFT43-205ENST00000553438 DOT1LQ8TEK3 1739 aa14.42□□□□□ -0.1
IFT43-205ENST00000553438 FBLN1P23142 703 aa14.42□□□□□ -0.1
IFT43-205ENST00000553438 LY75O60449 1722 aa14.41□□□□□ -0.1
IFT43-205ENST00000553438 MSH5O43196 834 aa14.41□□□□□ -0.1
IFT43-205ENST00000553438 GRIN3BO60391 1043 aa14.41□□□□□ -0.1
IFT43-205ENST00000553438 YBX3P16989 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
IFT43-205ENST00000553438 USP47Q96K76 1375 aa14.4□□□□□ -0.1
IFT43-205ENST00000553438 COL23A1Q86Y22 540 aaPredicted RBP14.4□□□□□ -0.1
IFT43-205ENST00000553438 SHANK3Q9BYB0 1731 aa14.4□□□□□ -0.1
IFT43-205ENST00000553438 CEP350Q5VT06 3117 aa14.38□□□□□ -0.11
IFT43-205ENST00000553438 RGPD2P0DJD1 1756 aa14.38□□□□□ -0.11
IFT43-205ENST00000553438 NBPF6Q5VWK0 638 aa14.38□□□□□ -0.11
IFT43-205ENST00000553438 MSL1Q68DK7 614 aa14.38□□□□□ -0.11
IFT43-205ENST00000553438 NBPF4Q96M43 638 aa14.38□□□□□ -0.11
IFT43-205ENST00000553438 TESK2Q96S53 571 aa14.38□□□□□ -0.11
IFT43-205ENST00000553438 CGNL1Q0VF96 1302 aa14.38□□□□□ -0.11
IFT43-205ENST00000553438 RTL1A6NKG5 1358 aa14.37□□□□□ -0.11
IFT43-205ENST00000553438 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
IFT43-205ENST00000553438 USHBP1Q8N6Y0 703 aa14.37□□□□□ -0.11
IFT43-205ENST00000553438 RAPGEF4Q8WZA2 1011 aa14.37□□□□□ -0.11
IFT43-205ENST00000553438 TONSLQ96HA7 1378 aa14.36□□□□□ -0.11
IFT43-205ENST00000553438 ST20-MTHFSA0A0A6YYL1 179 aa14.36□□□□□ -0.11
IFT43-205ENST00000553438 ATP10DQ9P241 1426 aa14.35□□□□□ -0.11
IFT43-205ENST00000553438 CD2APQ9Y5K6 639 aa14.35□□□□□ -0.11
IFT43-205ENST00000553438 SMG6Q86US8 1419 aaKnown RBP14.34□□□□□ -0.11
IFT43-205ENST00000553438 SLC24A1O60721 1099 aa14.34□□□□□ -0.11
IFT43-205ENST00000553438 TATP17735 454 aaPredicted RBP14.34□□□□□ -0.11
IFT43-205ENST00000553438 FLAD1Q8NFF5 587 aa14.34□□□□□ -0.11
IFT43-205ENST00000553438 GGNBP2Q9H3C7 697 aa14.34□□□□□ -0.11
IFT43-205ENST00000553438 PALLDQ8WX93 1383 aa14.34□□□□□ -0.11
IFT43-205ENST00000553438 FYB1O15117 783 aa14.33□□□□□ -0.12
IFT43-205ENST00000553438 HMGB2P26583 209 aaKnown RBP14.33□□□□□ -0.12
IFT43-205ENST00000553438 PCDH11XQ9BZA7 1347 aa14.33□□□□□ -0.12
IFT43-205ENST00000553438 PCDH11YQ9BZA8 1340 aa14.33□□□□□ -0.12
IFT43-205ENST00000553438 IFFO2Q5TF58 517 aa14.32□□□□□ -0.12
IFT43-205ENST00000553438 MPRIPQ6WCQ1 1025 aa14.32□□□□□ -0.12
IFT43-205ENST00000553438 C5P01031 1676 aa14.32□□□□□ -0.12
IFT43-205ENST00000553438 HSP90AB2PQ58FF8 381 aa14.31□□□□□ -0.12
IFT43-205ENST00000553438 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
IFT43-205ENST00000553438 INSRP06213 1382 aa14.31□□□□□ -0.12
IFT43-205ENST00000553438 CYP27B1O15528 508 aa14.3□□□□□ -0.12
IFT43-205ENST00000553438 SMARCC1Q92922 1105 aaPredicted RBP14.3□□□□□ -0.12
IFT43-205ENST00000553438 AK7Q96M32 723 aa14.3□□□□□ -0.12
IFT43-205ENST00000553438 ADCY9O60503 1353 aa14.3□□□□□ -0.12
IFT43-205ENST00000553438 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
IFT43-205ENST00000553438 FLT4P35916 1363 aa14.29□□□□□ -0.12
IFT43-205ENST00000553438 TAF1LQ8IZX4 1826 aa14.29□□□□□ -0.12
IFT43-205ENST00000553438 KIF24Q5T7B8 1368 aa14.28□□□□□ -0.12
IFT43-205ENST00000553438 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
IFT43-205ENST00000553438 C4BP0C0L5 1744 aa14.27□□□□□ -0.12
IFT43-205ENST00000553438 IGSF1Q8N6C5 1336 aa14.27□□□□□ -0.12
IFT43-205ENST00000553438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.27□□□□□ -0.13
IFT43-205ENST00000553438 PHF14O94880 888 aa14.27□□□□□ -0.13
IFT43-205ENST00000553438 TMF1P82094 1093 aa14.27□□□□□ -0.13
IFT43-205ENST00000553438 SMIM5Q71RC9 77 aa14.26□□□□□ -0.13
IFT43-205ENST00000553438 PIGBQ92521 554 aa14.26□□□□□ -0.13
IFT43-205ENST00000553438 WWC3Q9ULE0 1092 aa14.26□□□□□ -0.13
IFT43-205ENST00000553438 TOGARAM1Q9Y4F4 1720 aa14.26□□□□□ -0.13
IFT43-205ENST00000553438 NSD3Q9BZ95 1437 aa14.25□□□□□ -0.13
IFT43-205ENST00000553438 HSPA6P17066 643 aa14.25□□□□□ -0.13
IFT43-205ENST00000553438 ITGB4P16144 1822 aa14.25□□□□□ -0.13
IFT43-205ENST00000553438 LOC102724428A0A0B4J2F2 783 aa14.24□□□□□ -0.13
IFT43-205ENST00000553438 SSFA2P28290 1259 aa14.24□□□□□ -0.13
IFT43-205ENST00000553438 SIK1P57059 783 aa14.24□□□□□ -0.13
IFT43-205ENST00000553438 NKX1-1Q15270 411 aaPredicted RBP14.24□□□□□ -0.13
IFT43-205ENST00000553438 LINC00116Q8NCU8 138 aa14.24□□□□□ -0.13
IFT43-205ENST00000553438 EMILIN1Q9Y6C2 1016 aa14.24□□□□□ -0.13
IFT43-205ENST00000553438 UBR3Q6ZT12 1888 aa14.24□□□□□ -0.13
IFT43-205ENST00000553438 SPG7Q9UQ90 795 aa14.23□□□□□ -0.13
IFT43-205ENST00000553438 PKD1L3Q7Z443 1732 aa14.23□□□□□ -0.13
IFT43-205ENST00000553438 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
IFT43-205ENST00000553438 KIF20BQ96Q89 1820 aa14.22□□□□□ -0.13
IFT43-205ENST00000553438 MAP2P11137 1827 aaKnown RBP14.21□□□□□ -0.13
IFT43-205ENST00000553438 GNPATO15228 680 aa14.21□□□□□ -0.13
IFT43-205ENST00000553438 PPM1GO15355 546 aaPredicted RBP14.21□□□□□ -0.13
IFT43-205ENST00000553438 CDCA8Q53HL2 280 aa14.21□□□□□ -0.13
IFT43-205ENST00000553438 CARD14Q9BXL6 1004 aa14.21□□□□□ -0.13
IFT43-205ENST00000553438 TMOD3Q9NYL9 352 aa14.21□□□□□ -0.13
IFT43-205ENST00000553438 KIF3CO14782 793 aa14.2□□□□□ -0.14
IFT43-205ENST00000553438 ITPK1Q13572 414 aa14.2□□□□□ -0.14
IFT43-205ENST00000553438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.2□□□□□ -0.14
IFT43-205ENST00000553438 ASAP1Q9ULH1 1129 aa14.2□□□□□ -0.14
IFT43-205ENST00000553438 ATP6V1AP38606 617 aa14.19□□□□□ -0.14
IFT43-205ENST00000553438 EYA1Q99502 592 aa14.19□□□□□ -0.14
IFT43-205ENST00000553438 WASHC2AQ641Q2 1341 aa14.18□□□□□ -0.14
IFT43-205ENST00000553438 MMP10P09238 476 aa14.18□□□□□ -0.14
IFT43-205ENST00000553438 PHKG2P15735 406 aa14.18□□□□□ -0.14
IFT43-205ENST00000553438 CICQ96RK0 1608 aaPredicted RBP14.17□□□□□ -0.14
IFT43-205ENST00000553438 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms