RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 TXNRD1Q16881 649 aa17.81■□□□□ 0.44
ACTN1-207ENST00000553290 PROM2Q8N271 834 aa17.81■□□□□ 0.44
ACTN1-207ENST00000553290 USHBP1Q8N6Y0 703 aa17.81■□□□□ 0.44
ACTN1-207ENST00000553290 NSD2O96028 1365 aa17.8■□□□□ 0.44
ACTN1-207ENST00000553290 WASHC2AQ641Q2 1341 aa17.8■□□□□ 0.44
ACTN1-207ENST00000553290 TATP17735 454 aaPredicted RBP17.79■□□□□ 0.44
ACTN1-207ENST00000553290 POLKQ9UBT6 870 aa17.79■□□□□ 0.44
ACTN1-207ENST00000553290 SHANK3Q9BYB0 1731 aa17.78■□□□□ 0.44
ACTN1-207ENST00000553290 BTAF1O14981 1849 aa17.78■□□□□ 0.44
ACTN1-207ENST00000553290 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.44
ACTN1-207ENST00000553290 KIF7Q2M1P5 1343 aa17.76■□□□□ 0.43
ACTN1-207ENST00000553290 TNNT2P45379 298 aaPredicted RBP17.76■□□□□ 0.43
ACTN1-207ENST00000553290 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
ACTN1-207ENST00000553290 PCDH11XQ9BZA7 1347 aa17.74■□□□□ 0.43
ACTN1-207ENST00000553290 PCDH11YQ9BZA8 1340 aa17.74■□□□□ 0.43
ACTN1-207ENST00000553290 NCAPD2Q15021 1401 aa17.74■□□□□ 0.43
ACTN1-207ENST00000553290 PRIM1P49642 420 aaKnown RBP17.74■□□□□ 0.43
ACTN1-207ENST00000553290 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
ACTN1-207ENST00000553290 STK32BQ9NY57 414 aa17.74■□□□□ 0.43
ACTN1-207ENST00000553290 DOT1LQ8TEK3 1739 aa17.74■□□□□ 0.43
ACTN1-207ENST00000553290 MORC1Q86VD1 984 aa17.73■□□□□ 0.43
ACTN1-207ENST00000553290 EYA1Q99502 592 aa17.73■□□□□ 0.43
ACTN1-207ENST00000553290 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
ACTN1-207ENST00000553290 SPON1Q9HCB6 807 aa17.72■□□□□ 0.43
ACTN1-207ENST00000553290 EIF4A2Q14240 407 aaKnown RBP17.71■□□□□ 0.43
ACTN1-207ENST00000553290 PKD1L3Q7Z443 1732 aa17.7■□□□□ 0.42
ACTN1-207ENST00000553290 SLC27A3Q5K4L6 730 aa17.7■□□□□ 0.42
ACTN1-207ENST00000553290 SPG7Q9UQ90 795 aa17.7■□□□□ 0.42
ACTN1-207ENST00000553290 CASZ1Q86V15 1759 aa17.69■□□□□ 0.42
ACTN1-207ENST00000553290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.69■□□□□ 0.42
ACTN1-207ENST00000553290 PAPPAQ13219 1627 aa17.69■□□□□ 0.42
ACTN1-207ENST00000553290 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
ACTN1-207ENST00000553290 CYP27B1O15528 508 aa17.68■□□□□ 0.42
ACTN1-207ENST00000553290 AMER1Q5JTC6 1135 aaPredicted RBP17.68■□□□□ 0.42
ACTN1-207ENST00000553290 LRRC4BQ9NT99 713 aa17.68■□□□□ 0.42
ACTN1-207ENST00000553290 LY75O60449 1722 aa17.67■□□□□ 0.42
ACTN1-207ENST00000553290 IGSF1Q8N6C5 1336 aa17.66■□□□□ 0.42
ACTN1-207ENST00000553290 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-207ENST00000553290 NKX1-1Q15270 411 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-207ENST00000553290 PDGFDQ9GZP0 370 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-207ENST00000553290 PPP1R1BQ9UD71 204 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-207ENST00000553290 ZBTB7AO95365 584 aa17.63■□□□□ 0.41
ACTN1-207ENST00000553290 HMGB2P26583 209 aaKnown RBP17.63■□□□□ 0.41
ACTN1-207ENST00000553290 ZNF827Q17R98 1081 aa17.63■□□□□ 0.41
ACTN1-207ENST00000553290 IFNL2Q8IZJ0 200 aa17.63■□□□□ 0.41
ACTN1-207ENST00000553290 MPRIPQ6WCQ1 1025 aa17.62■□□□□ 0.41
ACTN1-207ENST00000553290 AKT1S1Q96B36 256 aa17.62■□□□□ 0.41
ACTN1-207ENST00000553290 CCNL1Q9UK58 526 aaPredicted RBP17.62■□□□□ 0.41
ACTN1-207ENST00000553290 ITGB4P16144 1822 aa17.62■□□□□ 0.41
ACTN1-207ENST00000553290 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
ACTN1-207ENST00000553290 PHKG2P15735 406 aa17.61■□□□□ 0.41
ACTN1-207ENST00000553290 MTFR1LQ9H019 292 aa17.61■□□□□ 0.41
ACTN1-207ENST00000553290 KCNQ4P56696 695 aa17.6■□□□□ 0.41
ACTN1-207ENST00000553290 CC2D1BQ5T0F9 858 aaKnown RBP17.6■□□□□ 0.41
ACTN1-207ENST00000553290 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
ACTN1-207ENST00000553290 ATF5Q9Y2D1 282 aaPredicted RBP17.6■□□□□ 0.41
ACTN1-207ENST00000553290 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
ACTN1-207ENST00000553290 QSER1Q2KHR3 1735 aa17.6■□□□□ 0.41
ACTN1-207ENST00000553290 PALLDQ8WX93 1383 aa17.59■□□□□ 0.41
ACTN1-207ENST00000553290 MTHFSP49914 203 aa17.59■□□□□ 0.41
ACTN1-207ENST00000553290 AMOTQ4VCS5 1084 aa17.59■□□□□ 0.41
ACTN1-207ENST00000553290 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
ACTN1-207ENST00000553290 TFCP2L1Q9NZI6 479 aa17.59■□□□□ 0.41
ACTN1-207ENST00000553290 IL13P35225 146 aa17.58■□□□□ 0.4
ACTN1-207ENST00000553290 PTGER2P43116 358 aa17.58■□□□□ 0.4
ACTN1-207ENST00000553290 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.4
ACTN1-207ENST00000553290 PIGBQ92521 554 aa17.58■□□□□ 0.4
ACTN1-207ENST00000553290 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
ACTN1-207ENST00000553290 TMOD3Q9NYL9 352 aa17.57■□□□□ 0.4
ACTN1-207ENST00000553290 KDRP35968 1356 aa17.56■□□□□ 0.4
ACTN1-207ENST00000553290 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
ACTN1-207ENST00000553290 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
ACTN1-207ENST00000553290 PNPLA7Q6ZV29 1317 aa17.55■□□□□ 0.4
ACTN1-207ENST00000553290 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-207ENST00000553290 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
ACTN1-207ENST00000553290 SGIP1Q9BQI5 828 aa17.55■□□□□ 0.4
ACTN1-207ENST00000553290 TUBGCP6Q96RT7 1819 aa17.55■□□□□ 0.4
ACTN1-207ENST00000553290 C5P01031 1676 aa17.55■□□□□ 0.4
ACTN1-207ENST00000553290 ERVV-2B6SEH9 535 aa17.54■□□□□ 0.4
ACTN1-207ENST00000553290 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
ACTN1-207ENST00000553290 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.4
ACTN1-207ENST00000553290 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
ACTN1-207ENST00000553290 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
ACTN1-207ENST00000553290 ARXQ96QS3 562 aa17.51■□□□□ 0.39
ACTN1-207ENST00000553290 ASAP1Q9ULH1 1129 aa17.51■□□□□ 0.39
ACTN1-207ENST00000553290 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
ACTN1-207ENST00000553290 SIK1P57059 783 aa17.5■□□□□ 0.39
ACTN1-207ENST00000553290 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-207ENST00000553290 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
ACTN1-207ENST00000553290 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
ACTN1-207ENST00000553290 KDM6AO15550 1401 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-207ENST00000553290 MSH5O43196 834 aa17.49■□□□□ 0.39
ACTN1-207ENST00000553290 POLD1P28340 1107 aa17.49■□□□□ 0.39
ACTN1-207ENST00000553290 CABP4P57796 275 aa17.49■□□□□ 0.39
ACTN1-207ENST00000553290 COL23A1Q86Y22 540 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-207ENST00000553290 FHDC1Q9C0D6 1143 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-207ENST00000553290 ATG3Q9NT62 314 aa17.49■□□□□ 0.39
ACTN1-207ENST00000553290 COL24A1Q17RW2 1714 aa17.49■□□□□ 0.39
ACTN1-207ENST00000553290 HMOX1P09601 288 aa17.48■□□□□ 0.39
ACTN1-207ENST00000553290 AK7Q96M32 723 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms