RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 RNF135Q8IUD6 432 aa10.33□□□□□ -0.76
PRKCH-204ENST00000553265 DEPDC4Q8N2C3 294 aa10.33□□□□□ -0.76
PRKCH-204ENST00000553265 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
PRKCH-204ENST00000553265 UACAQ9BZF9 1416 aa10.33□□□□□ -0.76
PRKCH-204ENST00000553265 PBXIP1Q96AQ6 731 aa10.32□□□□□ -0.76
PRKCH-204ENST00000553265 C1QTNF2Q9BXJ5 285 aa10.32□□□□□ -0.76
PRKCH-204ENST00000553265 USP17L5A8MUK1 530 aa10.31□□□□□ -0.76
PRKCH-204ENST00000553265 RPIAP49247 311 aa10.31□□□□□ -0.76
PRKCH-204ENST00000553265 RETREG2Q8NC44 543 aa10.31□□□□□ -0.76
PRKCH-204ENST00000553265 PLA2G2EQ9NZK7 142 aa10.31□□□□□ -0.76
PRKCH-204ENST00000553265 COL17A1Q9UMD9 1497 aaPredicted RBP10.3□□□□□ -0.76
PRKCH-204ENST00000553265 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
PRKCH-204ENST00000553265 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
PRKCH-204ENST00000553265 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
PRKCH-204ENST00000553265 RAB15P59190 212 aa10.3□□□□□ -0.76
PRKCH-204ENST00000553265 USP17L2Q6R6M4 530 aa10.3□□□□□ -0.76
PRKCH-204ENST00000553265 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
PRKCH-204ENST00000553265 ADGRL1O94910 1474 aa10.3□□□□□ -0.76
PRKCH-204ENST00000553265 RAPGEF2Q9Y4G8 1499 aa10.3□□□□□ -0.76
PRKCH-204ENST00000553265 WNT7BP56706 349 aa10.29□□□□□ -0.76
PRKCH-204ENST00000553265 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
PRKCH-204ENST00000553265 TSGA10IPQ3SY00 556 aa10.29□□□□□ -0.76
PRKCH-204ENST00000553265 PHTF2Q8N3S3 785 aa10.29□□□□□ -0.76
PRKCH-204ENST00000553265 PLPP7Q8NBV4 271 aa10.29□□□□□ -0.76
PRKCH-204ENST00000553265 EHBP1Q8NDI1 1231 aa10.29□□□□□ -0.76
PRKCH-204ENST00000553265 ZNF592Q92610 1267 aa10.29□□□□□ -0.76
PRKCH-204ENST00000553265 NCOA4Q13772 614 aa10.28□□□□□ -0.76
PRKCH-204ENST00000553265 CCDC85AQ96PX6 553 aaPredicted RBP10.28□□□□□ -0.76
PRKCH-204ENST00000553265 TLL2Q9Y6L7 1015 aa10.28□□□□□ -0.76
PRKCH-204ENST00000553265 PPP1R15AO75807 674 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-204ENST00000553265 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.77
PRKCH-204ENST00000553265 RC3H1Q5TC82 1133 aaKnown RBP10.27□□□□□ -0.77
PRKCH-204ENST00000553265 IFFO2Q5TF58 517 aa10.27□□□□□ -0.77
PRKCH-204ENST00000553265 TRMT44Q8IYL2 757 aaKnown RBP10.27□□□□□ -0.77
PRKCH-204ENST00000553265 NFATC2IPQ8NCF5 419 aa10.27□□□□□ -0.77
PRKCH-204ENST00000553265 WDR7Q9Y4E6 1490 aa10.27□□□□□ -0.77
PRKCH-204ENST00000553265 ABCA8O94911 1581 aa10.26□□□□□ -0.77
PRKCH-204ENST00000553265 TEX14Q8IWB6 1497 aa10.26□□□□□ -0.77
PRKCH-204ENST00000553265 CD2BP2O95400 341 aaKnown RBP10.26□□□□□ -0.77
PRKCH-204ENST00000553265 VARSP26640 1264 aaKnown RBP10.26□□□□□ -0.77
PRKCH-204ENST00000553265 SLC19A1P41440 591 aa10.26□□□□□ -0.77
PRKCH-204ENST00000553265 ARID5BQ14865 1188 aa10.26□□□□□ -0.77
PRKCH-204ENST00000553265 NBPF20Q3BBV1 942 aa10.26□□□□□ -0.77
PRKCH-204ENST00000553265 CFAP43Q8NDM7 1665 aa10.25□□□□□ -0.77
PRKCH-204ENST00000553265 A0A0G2JS52 829 aa10.25□□□□□ -0.77
PRKCH-204ENST00000553265 TRAF7Q6Q0C0 670 aa10.25□□□□□ -0.77
PRKCH-204ENST00000553265 DOLKQ9UPQ8 538 aa10.25□□□□□ -0.77
PRKCH-204ENST00000553265 TTBK1Q5TCY1 1321 aaPredicted RBP10.25□□□□□ -0.77
PRKCH-204ENST00000553265 OXLD1Q5BKU9 147 aa10.24□□□□□ -0.77
PRKCH-204ENST00000553265 KANK4Q5T7N3 995 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-204ENST00000553265 VASH1Q7L8A9 365 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-204ENST00000553265 PLEKHM2Q8IWE5 1019 aa10.24□□□□□ -0.77
PRKCH-204ENST00000553265 KCTD15Q96SI1 283 aaPredicted RBP10.24□□□□□ -0.77
PRKCH-204ENST00000553265 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
PRKCH-204ENST00000553265 ESPNB1AK53 854 aa10.23□□□□□ -0.77
PRKCH-204ENST00000553265 CDCA7Q9BWT1 371 aaPredicted RBP10.23□□□□□ -0.77
PRKCH-204ENST00000553265 VRTNQ9H8Y1 702 aa10.23□□□□□ -0.77
PRKCH-204ENST00000553265 HECW2Q9P2P5 1572 aa10.22□□□□□ -0.77
PRKCH-204ENST00000553265 FSHRP23945 695 aa10.22□□□□□ -0.77
PRKCH-204ENST00000553265 INTS6LQ5JSJ4 861 aaKnown RBP10.22□□□□□ -0.77
PRKCH-204ENST00000553265 MKRN1Q9UHC7 482 aaKnown RBP10.22□□□□□ -0.77
PRKCH-204ENST00000553265 CHIC2Q9UKJ5 165 aa10.22□□□□□ -0.77
PRKCH-204ENST00000553265 PCDHB11Q9Y5F2 797 aa10.22□□□□□ -0.77
PRKCH-204ENST00000553265 ACIN1Q9UKV3 1341 aaKnown RBP10.22□□□□□ -0.77
PRKCH-204ENST00000553265 PDIA4P13667 645 aaKnown RBP10.21□□□□□ -0.77
PRKCH-204ENST00000553265 EML3Q32P44 896 aa10.21□□□□□ -0.77
PRKCH-204ENST00000553265 ZNF697Q5TEC3 545 aa10.21□□□□□ -0.77
PRKCH-204ENST00000553265 SPRYD7Q5W111 196 aa10.21□□□□□ -0.77
PRKCH-204ENST00000553265 MRGPRX2Q96LB1 330 aa10.21□□□□□ -0.77
PRKCH-204ENST00000553265 CDV3Q9UKY7 258 aaKnown RBP10.21□□□□□ -0.77
PRKCH-204ENST00000553265 PRXQ9BXM0 1461 aa10.21□□□□□ -0.78
PRKCH-204ENST00000553265 MAGI3Q5TCQ9 1506 aa10.21□□□□□ -0.78
PRKCH-204ENST00000553265 GOLGA3Q08378 1498 aa10.2□□□□□ -0.78
PRKCH-204ENST00000553265 MAP4K5Q9Y4K4 846 aa10.2□□□□□ -0.78
PRKCH-204ENST00000553265 KIF21BO75037 1637 aa10.19□□□□□ -0.78
PRKCH-204ENST00000553265 FOXC1Q12948 553 aa10.19□□□□□ -0.78
PRKCH-204ENST00000553265 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
PRKCH-204ENST00000553265 CRTC2Q53ET0 693 aaPredicted RBP10.19□□□□□ -0.78
PRKCH-204ENST00000553265 RNF20Q5VTR2 975 aa10.19□□□□□ -0.78
PRKCH-204ENST00000553265 PRKD2Q9BZL6 878 aa10.19□□□□□ -0.78
PRKCH-204ENST00000553265 SAMD9Q5K651 1589 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L10C9JJH3 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L12C9JPN9 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L21D6R901 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 WNT7AO00755 349 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 SIAH2O43255 324 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 ATG7O95352 703 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
PRKCH-204ENST00000553265 ERVH48-1M5A8F1 160 aa10.17□□□□□ -0.78
PRKCH-204ENST00000553265 RASA1P20936 1047 aa10.17□□□□□ -0.78
PRKCH-204ENST00000553265 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms