RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 ITPRIPQ8IWB1 547 aa10.57□□□□□ -0.72
RAB5B-210ENST00000553116 TSPYL6Q8N831 410 aa10.57□□□□□ -0.72
RAB5B-210ENST00000553116 SLIT3O75094 1523 aa10.57□□□□□ -0.72
RAB5B-210ENST00000553116 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
RAB5B-210ENST00000553116 ALDH1L2Q3SY69 923 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 NBPF6Q5VWK0 638 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 CABLES1Q8TDN4 633 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 ZNF428Q96B54 188 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 NBPF4Q96M43 638 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 USP19O94966 1318 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 RGPD2P0DJD1 1756 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 ATF7IPQ6VMQ6 1270 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 CENPQQ7L2Z9 268 aaPredicted RBP10.56□□□□□ -0.72
RAB5B-210ENST00000553116 TSPYL4Q9UJ04 414 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 TNS3Q68CZ2 1445 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 TRIM27P14373 513 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 C8orf58Q8NAV2 365 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 MIS18AQ9NYP9 233 aa10.56□□□□□ -0.72
RAB5B-210ENST00000553116 VAMP4O75379 141 aa10.55□□□□□ -0.72
RAB5B-210ENST00000553116 CSB-PGBD3P0DP91 1061 aa10.55□□□□□ -0.72
RAB5B-210ENST00000553116 BRINP3Q76B58 766 aa10.55□□□□□ -0.72
RAB5B-210ENST00000553116 MVPQ14764 893 aaKnown RBP10.55□□□□□ -0.72
RAB5B-210ENST00000553116 SLAIN2Q9P270 581 aa10.55□□□□□ -0.72
RAB5B-210ENST00000553116 MAP3K5Q99683 1374 aa10.54□□□□□ -0.72
RAB5B-210ENST00000553116 RBM19Q9Y4C8 960 aaKnown RBP10.54□□□□□ -0.72
RAB5B-210ENST00000553116 PHRF1Q9P1Y6 1649 aaKnown RBP10.54□□□□□ -0.72
RAB5B-210ENST00000553116 RGPD5Q99666 1765 aa10.54□□□□□ -0.72
RAB5B-210ENST00000553116 CHL1O00533 1208 aa10.53□□□□□ -0.72
RAB5B-210ENST00000553116 KRT24Q2M2I5 525 aa10.53□□□□□ -0.72
RAB5B-210ENST00000553116 NLRP2Q9NX02 1062 aa10.53□□□□□ -0.72
RAB5B-210ENST00000553116 CHRNA2Q15822 529 aa10.53□□□□□ -0.72
RAB5B-210ENST00000553116 ZNF530Q6P9A1 599 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-210ENST00000553116 AXIN2Q9Y2T1 843 aa10.53□□□□□ -0.72
RAB5B-210ENST00000553116 MED1Q15648 1581 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-210ENST00000553116 PLEKHO1Q53GL0 409 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-210ENST00000553116 DDX19BQ9UMR2 479 aa10.53□□□□□ -0.72
RAB5B-210ENST00000553116 SPATA31A3Q5VYP0 1347 aa10.52□□□□□ -0.72
RAB5B-210ENST00000553116 HTATSF1O43719 755 aaKnown RBP10.52□□□□□ -0.73
RAB5B-210ENST00000553116 PXDNQ92626 1479 aa10.52□□□□□ -0.73
RAB5B-210ENST00000553116 AAMPQ13685 434 aa10.52□□□□□ -0.73
RAB5B-210ENST00000553116 C1orf141Q5JVX7 400 aa10.52□□□□□ -0.73
RAB5B-210ENST00000553116 SKAP1Q86WV1 359 aa10.52□□□□□ -0.73
RAB5B-210ENST00000553116 TMEM57Q8N5G2 664 aa10.52□□□□□ -0.73
RAB5B-210ENST00000553116 KDM2BQ8NHM5 1336 aa10.52□□□□□ -0.73
RAB5B-210ENST00000553116 CRB1P82279 1406 aa10.52□□□□□ -0.73
RAB5B-210ENST00000553116 MRPL50Q8N5N7 158 aaKnown RBP10.51□□□□□ -0.73
RAB5B-210ENST00000553116 ERBB3P21860 1342 aa10.51□□□□□ -0.73
RAB5B-210ENST00000553116 RGS3P49796 1198 aa10.51□□□□□ -0.73
RAB5B-210ENST00000553116 RAPGEF4Q8WZA2 1011 aa10.51□□□□□ -0.73
RAB5B-210ENST00000553116 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.5□□□□□ -0.73
RAB5B-210ENST00000553116 KIAA0232Q92628 1395 aa10.5□□□□□ -0.73
RAB5B-210ENST00000553116 TEFQ10587 303 aa10.5□□□□□ -0.73
RAB5B-210ENST00000553116 AMOTQ4VCS5 1084 aa10.5□□□□□ -0.73
RAB5B-210ENST00000553116 PRDM11Q9NQV5 511 aa10.5□□□□□ -0.73
RAB5B-210ENST00000553116 IL17REQ8NFR9 667 aa10.5□□□□□ -0.73
RAB5B-210ENST00000553116 TAF7Q15545 349 aaPredicted RBP10.49□□□□□ -0.73
RAB5B-210ENST00000553116 API5Q9BZZ5 524 aaKnown RBP10.49□□□□□ -0.73
RAB5B-210ENST00000553116 IGHDP01880 384 aa10.49□□□□□ -0.73
RAB5B-210ENST00000553116 MPRIPQ6WCQ1 1025 aa10.49□□□□□ -0.73
RAB5B-210ENST00000553116 RWDD1Q9H446 243 aaPredicted RBP10.49□□□□□ -0.73
RAB5B-210ENST00000553116 BRPF1P55201 1214 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-210ENST00000553116 AKAP4Q5JQC9 854 aa10.48□□□□□ -0.73
RAB5B-210ENST00000553116 NECTIN2Q92692 538 aa10.48□□□□□ -0.73
RAB5B-210ENST00000553116 STK31Q9BXU1 1019 aa10.48□□□□□ -0.73
RAB5B-210ENST00000553116 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
RAB5B-210ENST00000553116 TULP1O00294 542 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-210ENST00000553116 TATP17735 454 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-210ENST00000553116 ARHGAP45Q92619 1136 aa10.48□□□□□ -0.73
RAB5B-210ENST00000553116 CHMP4BQ9H444 224 aaKnown RBP10.48□□□□□ -0.73
RAB5B-210ENST00000553116 LRRC37A3O60309 1634 aa10.47□□□□□ -0.73
RAB5B-210ENST00000553116 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
RAB5B-210ENST00000553116 LGR6Q9HBX8 967 aa10.47□□□□□ -0.73
RAB5B-210ENST00000553116 SOS2Q07890 1332 aaPredicted RBP10.47□□□□□ -0.73
RAB5B-210ENST00000553116 ERICH6Q7L0X2 663 aa10.47□□□□□ -0.73
RAB5B-210ENST00000553116 BTBD11A6QL63 1104 aa10.45□□□□□ -0.74
RAB5B-210ENST00000553116 LMO7Q8WWI1 1683 aa10.45□□□□□ -0.74
RAB5B-210ENST00000553116 CCDC30Q5VVM6 783 aa10.45□□□□□ -0.74
RAB5B-210ENST00000553116 TOM1L2Q6ZVM7 507 aa10.45□□□□□ -0.74
RAB5B-210ENST00000553116 VIRMAQ69YN4 1812 aaKnown RBP10.45□□□□□ -0.74
RAB5B-210ENST00000553116 CRYBG1Q9Y4K1 1723 aa10.45□□□□□ -0.74
RAB5B-210ENST00000553116 C1orf115Q9H7X2 142 aa10.45□□□□□ -0.74
RAB5B-210ENST00000553116 SPG7Q9UQ90 795 aa10.45□□□□□ -0.74
RAB5B-210ENST00000553116 CPDO75976 1380 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 ABCC4O15439 1325 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 RNMTO43148 476 aaKnown RBP10.44□□□□□ -0.74
RAB5B-210ENST00000553116 EIF2S2P20042 333 aaKnown RBP10.44□□□□□ -0.74
RAB5B-210ENST00000553116 SLC4A10Q6U841 1118 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 STRN4Q9NRL3 753 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 BABAM1Q9NWV8 329 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
RAB5B-210ENST00000553116 CAMTA1Q9Y6Y1 1673 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 PTPRCP08575 1304 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 HDGFL1Q5TGJ6 251 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 ZBTB40Q9NUA8 1239 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 COL18A1P39060 1754 aa10.44□□□□□ -0.74
RAB5B-210ENST00000553116 CEMIPQ8WUJ3 1361 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms