RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
PPFIA2-228ENST00000553058 PTK7Q13308 1070 aa11.87□□□□□ -0.51
PPFIA2-228ENST00000553058 NAALADL2Q58DX5 795 aa11.87□□□□□ -0.51
PPFIA2-228ENST00000553058 LARP1Q6PKG0 1096 aaKnown RBP11.87□□□□□ -0.51
PPFIA2-228ENST00000553058 DEPDC4Q8N2C3 294 aa11.87□□□□□ -0.51
PPFIA2-228ENST00000553058 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
PPFIA2-228ENST00000553058 SEC24BO95487 1268 aa11.86□□□□□ -0.51
PPFIA2-228ENST00000553058 FBXO33Q7Z6M2 555 aa11.86□□□□□ -0.51
PPFIA2-228ENST00000553058 CDC42BPAQ5VT25 1732 aa11.86□□□□□ -0.51
PPFIA2-228ENST00000553058 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 ITSN2Q9NZM3 1697 aa11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 SAMD9LQ8IVG5 1584 aa11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 PER1O15534 1290 aaPredicted RBP11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 RECKO95980 971 aa11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 C7P10643 843 aa11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 RASA1P20936 1047 aa11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 SCNN1AP37088 669 aa11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 TAGLNQ01995 201 aaKnown RBP11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 SF3A1Q15459 793 aaKnown RBP11.85□□□□□ -0.51
PPFIA2-228ENST00000553058 FBXO45P0C2W1 286 aa11.84□□□□□ -0.51
PPFIA2-228ENST00000553058 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
PPFIA2-228ENST00000553058 KIAA1107Q9UPP5 1409 aa11.84□□□□□ -0.51
PPFIA2-228ENST00000553058 SYCP2Q9BX26 1530 aa11.83□□□□□ -0.52
PPFIA2-228ENST00000553058 HNRNPMP52272 730 aaKnown RBP eCLIP11.83□□□□□ -0.52
PPFIA2-228ENST00000553058 ANKMY2Q8IV38 441 aa11.82□□□□□ -0.52
PPFIA2-228ENST00000553058 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
PPFIA2-228ENST00000553058 ZBBXA8MT70 800 aa11.81□□□□□ -0.52
PPFIA2-228ENST00000553058 SLC10A3P09131 477 aa11.81□□□□□ -0.52
PPFIA2-228ENST00000553058 PACS2Q86VP3 889 aa11.81□□□□□ -0.52
PPFIA2-228ENST00000553058 C1orf216Q8TAB5 229 aa11.81□□□□□ -0.52
PPFIA2-228ENST00000553058 SPAG9O60271 1321 aaKnown RBP11.81□□□□□ -0.52
PPFIA2-228ENST00000553058 ZNF644Q9H582 1327 aaPredicted RBP11.81□□□□□ -0.52
PPFIA2-228ENST00000553058 ATP5J2-PTCD1G3V325 749 aa11.8□□□□□ -0.52
PPFIA2-228ENST00000553058 CLCN6P51797 869 aa11.8□□□□□ -0.52
PPFIA2-228ENST00000553058 SWI5Q1ZZU3 235 aa11.8□□□□□ -0.52
PPFIA2-228ENST00000553058 CFDP1Q9UEE9 299 aaPredicted RBP11.8□□□□□ -0.52
PPFIA2-228ENST00000553058 MBD5Q9P267 1494 aa11.8□□□□□ -0.52
PPFIA2-228ENST00000553058 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
PPFIA2-228ENST00000553058 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
PPFIA2-228ENST00000553058 UHRF1BP1Q6BDS2 1440 aa11.79□□□□□ -0.52
PPFIA2-228ENST00000553058 SMAPO00193 183 aa11.79□□□□□ -0.52
PPFIA2-228ENST00000553058 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
PPFIA2-228ENST00000553058 EGFL7Q9UHF1 273 aa11.79□□□□□ -0.52
PPFIA2-228ENST00000553058 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
PPFIA2-228ENST00000553058 CEP162Q5TB80 1403 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 CNTLNQ9NXG0 1405 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 C3P01024 1663 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 PLEKHH2Q8IVE3 1493 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 SETD1BQ9UPS6 1966 aaKnown RBP11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 NCOA4Q13772 614 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 TSNAXIP1Q2TAA8 658 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 TIAM1Q13009 1591 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 INO80Q9ULG1 1556 aaPredicted RBP11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 MTUS2Q5JR59 1369 aa11.78□□□□□ -0.52
PPFIA2-228ENST00000553058 ATP7AQ04656 1500 aa11.77□□□□□ -0.52
PPFIA2-228ENST00000553058 DPYDQ12882 1025 aa11.77□□□□□ -0.53
PPFIA2-228ENST00000553058 ABL1P00519 1130 aa11.76□□□□□ -0.53
PPFIA2-228ENST00000553058 NUDT7P0C024 238 aa11.76□□□□□ -0.53
PPFIA2-228ENST00000553058 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
PPFIA2-228ENST00000553058 GRIPAP1Q4V328 841 aa11.76□□□□□ -0.53
PPFIA2-228ENST00000553058 ZMYM3Q14202 1370 aa11.76□□□□□ -0.53
PPFIA2-228ENST00000553058 PTPRTO14522 1441 aa11.76□□□□□ -0.53
PPFIA2-228ENST00000553058 NPATQ14207 1427 aa11.76□□□□□ -0.53
PPFIA2-228ENST00000553058 A2MP01023 1474 aa11.76□□□□□ -0.53
PPFIA2-228ENST00000553058 H3BRB1 525 aa11.75□□□□□ -0.53
PPFIA2-228ENST00000553058 MAPK1P28482 360 aa11.75□□□□□ -0.53
PPFIA2-228ENST00000553058 ERCC5P28715 1186 aaPredicted RBP11.75□□□□□ -0.53
PPFIA2-228ENST00000553058 ASB16Q96NS5 453 aa11.75□□□□□ -0.53
PPFIA2-228ENST00000553058 BCL11AQ9H165 835 aa11.75□□□□□ -0.53
PPFIA2-228ENST00000553058 TUT1Q9H6E5 874 aaKnown RBP11.75□□□□□ -0.53
PPFIA2-228ENST00000553058 NCOA1Q15788 1441 aa11.75□□□□□ -0.53
PPFIA2-228ENST00000553058 ICMTO60725 284 aa11.74□□□□□ -0.53
PPFIA2-228ENST00000553058 ZNF211Q13398 564 aaPredicted RBP11.74□□□□□ -0.53
PPFIA2-228ENST00000553058 BCL2L12Q9HB09 334 aa11.74□□□□□ -0.53
PPFIA2-228ENST00000553058 EHBP1L1Q8N3D4 1523 aa11.74□□□□□ -0.53
PPFIA2-228ENST00000553058 FUT2Q10981 343 aa11.73□□□□□ -0.53
PPFIA2-228ENST00000553058 PTPRKQ15262 1439 aa11.73□□□□□ -0.53
PPFIA2-228ENST00000553058 ANKRD13AQ8IZ07 590 aa11.73□□□□□ -0.53
PPFIA2-228ENST00000553058 ANO2Q9NQ90 1003 aa11.73□□□□□ -0.53
PPFIA2-228ENST00000553058 LZTS3O60299 673 aaPredicted RBP11.72□□□□□ -0.53
PPFIA2-228ENST00000553058 TAS1R3Q7RTX0 852 aa11.72□□□□□ -0.53
PPFIA2-228ENST00000553058 GLYCTKQ8IVS8 523 aa11.72□□□□□ -0.53
PPFIA2-228ENST00000553058 OGFOD1Q8N543 542 aa11.72□□□□□ -0.53
PPFIA2-228ENST00000553058 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
PPFIA2-228ENST00000553058 MROH2AA6NES4 1674 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 NCOA2Q15596 1464 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 RTEL1-TNFRSF6BF6WH68 1400 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 COL19A1Q14993 1142 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 SLFNL1Q499Z3 407 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 RNF135Q8IUD6 432 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 ZSCAN29Q8IWY8 852 aaPredicted RBP11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 ESF1Q9H501 851 aaKnown RBP11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 CEP126Q9P2H0 1117 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 FKBPLQ9UIM3 349 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 DCTN4Q9UJW0 460 aa11.71□□□□□ -0.53
PPFIA2-228ENST00000553058 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms