RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 NLRP2Q9NX02 1062 aa12.89□□□□□ -0.35
PRKCH-203ENST00000552875 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
PRKCH-203ENST00000552875 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
PRKCH-203ENST00000552875 CTCFP49711 727 aaPredicted RBP12.87□□□□□ -0.35
PRKCH-203ENST00000552875 USP47Q96K76 1375 aa12.86□□□□□ -0.35
PRKCH-203ENST00000552875 PRIM1P49642 420 aaKnown RBP12.86□□□□□ -0.35
PRKCH-203ENST00000552875 SRPK2P78362 688 aaKnown RBP12.86□□□□□ -0.35
PRKCH-203ENST00000552875 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
PRKCH-203ENST00000552875 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
PRKCH-203ENST00000552875 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
PRKCH-203ENST00000552875 ANKRD36BQ8N2N9 1353 aa12.85□□□□□ -0.35
PRKCH-203ENST00000552875 SOX12O15370 315 aa12.85□□□□□ -0.35
PRKCH-203ENST00000552875 TGFB2P61812 414 aa12.85□□□□□ -0.35
PRKCH-203ENST00000552875 PIK3C2AO00443 1686 aa12.85□□□□□ -0.35
PRKCH-203ENST00000552875 COL18A1P39060 1754 aa12.84□□□□□ -0.35
PRKCH-203ENST00000552875 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
PRKCH-203ENST00000552875 FOXN1O15353 648 aa12.84□□□□□ -0.35
PRKCH-203ENST00000552875 PIAS4Q8N2W9 510 aaPredicted RBP12.84□□□□□ -0.35
PRKCH-203ENST00000552875 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
PRKCH-203ENST00000552875 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
PRKCH-203ENST00000552875 MPHOSPH9Q99550 1183 aa12.83□□□□□ -0.36
PRKCH-203ENST00000552875 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
PRKCH-203ENST00000552875 FCHSD2O94868 740 aa12.82□□□□□ -0.36
PRKCH-203ENST00000552875 RGS19P49795 217 aa12.82□□□□□ -0.36
PRKCH-203ENST00000552875 AK7Q96M32 723 aa12.82□□□□□ -0.36
PRKCH-203ENST00000552875 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
PRKCH-203ENST00000552875 ERBB3P21860 1342 aa12.82□□□□□ -0.36
PRKCH-203ENST00000552875 CCDC85CA6NKD9 419 aa12.8□□□□□ -0.36
PRKCH-203ENST00000552875 VEGFAP15692 232 aaPredicted RBP12.8□□□□□ -0.36
PRKCH-203ENST00000552875 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
PRKCH-203ENST00000552875 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
PRKCH-203ENST00000552875 MKRN1Q9UHC7 482 aaKnown RBP12.79□□□□□ -0.36
PRKCH-203ENST00000552875 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
PRKCH-203ENST00000552875 KAT6BQ8WYB5 2073 aa12.79□□□□□ -0.36
PRKCH-203ENST00000552875 PHF14O94880 888 aa12.78□□□□□ -0.36
PRKCH-203ENST00000552875 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
PRKCH-203ENST00000552875 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
PRKCH-203ENST00000552875 LY75O60449 1722 aa12.77□□□□□ -0.36
PRKCH-203ENST00000552875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
PRKCH-203ENST00000552875 A0A0G2JLW4 131 aa12.77□□□□□ -0.37
PRKCH-203ENST00000552875 SSFA2P28290 1259 aa12.77□□□□□ -0.37
PRKCH-203ENST00000552875 LBX1P52954 281 aa12.77□□□□□ -0.37
PRKCH-203ENST00000552875 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
PRKCH-203ENST00000552875 NSD2O96028 1365 aa12.77□□□□□ -0.37
PRKCH-203ENST00000552875 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.37
PRKCH-203ENST00000552875 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
PRKCH-203ENST00000552875 ANKRD24Q8TF21 1146 aa12.76□□□□□ -0.37
PRKCH-203ENST00000552875 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
PRKCH-203ENST00000552875 TTC21AQ8NDW8 1320 aa12.76□□□□□ -0.37
PRKCH-203ENST00000552875 MMP10P09238 476 aa12.75□□□□□ -0.37
PRKCH-203ENST00000552875 TTC21BQ7Z4L5 1316 aa12.74□□□□□ -0.37
PRKCH-203ENST00000552875 CCDC87Q9NVE4 849 aa12.74□□□□□ -0.37
PRKCH-203ENST00000552875 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
PRKCH-203ENST00000552875 CFAP44Q96MT7 982 aa12.73□□□□□ -0.37
PRKCH-203ENST00000552875 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
PRKCH-203ENST00000552875 CNTNAP1P78357 1384 aa12.72□□□□□ -0.37
PRKCH-203ENST00000552875 PALLDQ8WX93 1383 aa12.72□□□□□ -0.37
PRKCH-203ENST00000552875 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
PRKCH-203ENST00000552875 DPEP1P16444 411 aa12.72□□□□□ -0.37
PRKCH-203ENST00000552875 DALRD3Q5D0E6 543 aaKnown RBP12.72□□□□□ -0.37
PRKCH-203ENST00000552875 ZCRB1Q8TBF4 217 aaKnown RBP12.72□□□□□ -0.37
PRKCH-203ENST00000552875 SMARCC1Q92922 1105 aaPredicted RBP12.72□□□□□ -0.37
PRKCH-203ENST00000552875 WBP1LQ9NX94 342 aa12.72□□□□□ -0.37
PRKCH-203ENST00000552875 RGPD5Q99666 1765 aa12.71□□□□□ -0.37
PRKCH-203ENST00000552875 DCAF5Q96JK2 942 aa12.71□□□□□ -0.37
PRKCH-203ENST00000552875 NFAT5O94916 1531 aa12.71□□□□□ -0.38
PRKCH-203ENST00000552875 C5P01031 1676 aa12.7□□□□□ -0.38
PRKCH-203ENST00000552875 QRICH2Q9H0J4 1663 aa12.7□□□□□ -0.38
PRKCH-203ENST00000552875 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
PRKCH-203ENST00000552875 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
PRKCH-203ENST00000552875 USP54Q70EL1 1684 aa12.69□□□□□ -0.38
PRKCH-203ENST00000552875 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
PRKCH-203ENST00000552875 DOT1LQ8TEK3 1739 aa12.68□□□□□ -0.38
PRKCH-203ENST00000552875 HSPA8P11142 646 aaKnown RBP12.68□□□□□ -0.38
PRKCH-203ENST00000552875 CHADLQ6NUI6 762 aa12.68□□□□□ -0.38
PRKCH-203ENST00000552875 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
PRKCH-203ENST00000552875 CENPJQ9HC77 1338 aaPredicted RBP12.67□□□□□ -0.38
PRKCH-203ENST00000552875 LMNB1P20700 586 aa12.67□□□□□ -0.38
PRKCH-203ENST00000552875 TMF1P82094 1093 aa12.67□□□□□ -0.38
PRKCH-203ENST00000552875 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
PRKCH-203ENST00000552875 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
PRKCH-203ENST00000552875 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
PRKCH-203ENST00000552875 C4BP0C0L5 1744 aa12.66□□□□□ -0.38
PRKCH-203ENST00000552875 GNPATO15228 680 aa12.66□□□□□ -0.38
PRKCH-203ENST00000552875 VEGFBP49765 207 aa12.66□□□□□ -0.38
PRKCH-203ENST00000552875 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
PRKCH-203ENST00000552875 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
PRKCH-203ENST00000552875 CGNL1Q0VF96 1302 aa12.65□□□□□ -0.38
PRKCH-203ENST00000552875 KCNA3P22001 575 aa12.64□□□□□ -0.39
PRKCH-203ENST00000552875 EVC2Q86UK5 1308 aa12.63□□□□□ -0.39
PRKCH-203ENST00000552875 KIF13BQ9NQT8 1826 aa12.63□□□□□ -0.39
PRKCH-203ENST00000552875 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
PRKCH-203ENST00000552875 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
PRKCH-203ENST00000552875 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
PRKCH-203ENST00000552875 PPARGC1BQ86YN6 1023 aaKnown RBP12.63□□□□□ -0.39
PRKCH-203ENST00000552875 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
PRKCH-203ENST00000552875 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
PRKCH-203ENST00000552875 N4BP2Q86UW6 1770 aaPredicted RBP12.63□□□□□ -0.39
PRKCH-203ENST00000552875 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
PRKCH-203ENST00000552875 IP6K1Q92551 441 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms