RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 NCOA4Q13772 614 aa6.26□□□□□ -1.41
NPAS3-212ENST00000552696 TBC1D9Q6ZT07 1266 aa6.26□□□□□ -1.41
NPAS3-212ENST00000552696 CYP2U1Q7Z449 544 aa6.26□□□□□ -1.41
NPAS3-212ENST00000552696 DEPDC4Q8N2C3 294 aa6.26□□□□□ -1.41
NPAS3-212ENST00000552696 KDF1Q8NAX2 398 aaPredicted RBP6.26□□□□□ -1.41
NPAS3-212ENST00000552696 TRIM47Q96LD4 638 aa6.26□□□□□ -1.41
NPAS3-212ENST00000552696 ESF1Q9H501 851 aaKnown RBP6.26□□□□□ -1.41
NPAS3-212ENST00000552696 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
NPAS3-212ENST00000552696 TIMELESSQ9UNS1 1208 aa6.26□□□□□ -1.41
NPAS3-212ENST00000552696 ARID3CA6NKF2 412 aa6.25□□□□□ -1.41
NPAS3-212ENST00000552696 ATP5J2-PTCD1G3V325 749 aa6.25□□□□□ -1.41
NPAS3-212ENST00000552696 SPINT1O43278 529 aa6.25□□□□□ -1.41
NPAS3-212ENST00000552696 ATP9BO43861 1147 aa6.25□□□□□ -1.41
NPAS3-212ENST00000552696 SNRPBP14678 240 aaKnown RBP6.25□□□□□ -1.41
NPAS3-212ENST00000552696 ZNF395Q9H8N7 513 aaPredicted RBP6.25□□□□□ -1.41
NPAS3-212ENST00000552696 USP17L3A6NCW0 530 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 USP17L4A6NCW7 530 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 C11orf95C9JLR9 678 aaPredicted RBP6.24□□□□□ -1.41
NPAS3-212ENST00000552696 PTGIRP43119 386 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 USP4Q13107 963 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 EML3Q32P44 896 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 ZNF787Q6DD87 383 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 USP17L2Q6R6M4 530 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 USP17L1Q7RTZ2 530 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 KIFC2Q96AC6 838 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 INSM2Q96T92 566 aaPredicted RBP6.24□□□□□ -1.41
NPAS3-212ENST00000552696 ARHGEF10LQ9HCE6 1279 aa6.24□□□□□ -1.41
NPAS3-212ENST00000552696 PALM3A6NDB9 673 aaPredicted RBP6.23□□□□□ -1.41
NPAS3-212ENST00000552696 ERICH6Q7L0X2 663 aa6.23□□□□□ -1.41
NPAS3-212ENST00000552696 PLEKHM2Q8IWE5 1019 aa6.23□□□□□ -1.41
NPAS3-212ENST00000552696 SIRT1Q96EB6 747 aa6.23□□□□□ -1.41
NPAS3-212ENST00000552696 PPP1R12CQ9BZL4 782 aa6.23□□□□□ -1.41
NPAS3-212ENST00000552696 POLMQ9NP87 494 aaPredicted RBP6.23□□□□□ -1.41
NPAS3-212ENST00000552696 RAB6BQ9NRW1 208 aa6.23□□□□□ -1.41
NPAS3-212ENST00000552696 TFIP11Q9UBB9 837 aaKnown RBP6.23□□□□□ -1.41
NPAS3-212ENST00000552696 SOBPA7XYQ1 873 aa6.22□□□□□ -1.41
NPAS3-212ENST00000552696 MEN1O00255 615 aa6.22□□□□□ -1.41
NPAS3-212ENST00000552696 STAU1O95793 577 aaKnown RBP6.22□□□□□ -1.41
NPAS3-212ENST00000552696 CTSOP43234 321 aaPredicted RBP6.22□□□□□ -1.41
NPAS3-212ENST00000552696 NOD1Q9Y239 953 aa6.22□□□□□ -1.41
NPAS3-212ENST00000552696 MAFBQ9Y5Q3 323 aaPredicted RBP6.22□□□□□ -1.41
NPAS3-212ENST00000552696 SOS2Q07890 1332 aaPredicted RBP6.22□□□□□ -1.41
NPAS3-212ENST00000552696 A0A1W2PRU2 124 aa6.21□□□□□ -1.42
NPAS3-212ENST00000552696 TTLL8A6PVC2 850 aa6.21□□□□□ -1.42
NPAS3-212ENST00000552696 LZTS3O60299 673 aaPredicted RBP6.21□□□□□ -1.42
NPAS3-212ENST00000552696 GNRH1P01148 92 aa6.21□□□□□ -1.42
NPAS3-212ENST00000552696 GTF2IP78347 998 aa6.21□□□□□ -1.42
NPAS3-212ENST00000552696 FOXD4L5Q5VV16 416 aaPredicted RBP6.21□□□□□ -1.42
NPAS3-212ENST00000552696 DNMT3LQ9UJW3 386 aa6.21□□□□□ -1.42
NPAS3-212ENST00000552696 MAN1A2O60476 641 aa6.2□□□□□ -1.42
NPAS3-212ENST00000552696 IL2RAP01589 272 aa6.2□□□□□ -1.42
NPAS3-212ENST00000552696 CLN3Q13286 438 aa6.2□□□□□ -1.42
NPAS3-212ENST00000552696 CFAP70Q5T0N1 1121 aa6.2□□□□□ -1.42
NPAS3-212ENST00000552696 C1orf115Q9H7X2 142 aa6.2□□□□□ -1.42
NPAS3-212ENST00000552696 ETNK1Q9HBU6 452 aa6.2□□□□□ -1.42
NPAS3-212ENST00000552696 FIGNL2A6NMB9 653 aa6.19□□□□□ -1.42
NPAS3-212ENST00000552696 LMOD1P29536 600 aaPredicted RBP6.19□□□□□ -1.42
NPAS3-212ENST00000552696 SCNN1DP51172 638 aa6.19□□□□□ -1.42
NPAS3-212ENST00000552696 PSME1Q06323 249 aa6.19□□□□□ -1.42
NPAS3-212ENST00000552696 RNF217Q8TC41 542 aa6.19□□□□□ -1.42
NPAS3-212ENST00000552696 NLRP3Q96P20 1036 aa6.19□□□□□ -1.42
NPAS3-212ENST00000552696 MKRN1Q9UHC7 482 aaKnown RBP6.19□□□□□ -1.42
NPAS3-212ENST00000552696 KIAA1024Q9UPX6 916 aa6.19□□□□□ -1.42
NPAS3-212ENST00000552696 PCDHGA11Q9Y5H2 935 aa6.19□□□□□ -1.42
NPAS3-212ENST00000552696 GDF10P55107 478 aa6.18□□□□□ -1.42
NPAS3-212ENST00000552696 CLDN10P78369 228 aa6.18□□□□□ -1.42
NPAS3-212ENST00000552696 ESCO1Q5FWF5 840 aa6.18□□□□□ -1.42
NPAS3-212ENST00000552696 TRIM50Q86XT4 487 aa6.18□□□□□ -1.42
NPAS3-212ENST00000552696 CCDC82Q8N4S0 544 aa6.18□□□□□ -1.42
NPAS3-212ENST00000552696 CNKSR1Q969H4 720 aa6.18□□□□□ -1.42
NPAS3-212ENST00000552696 CCDC97Q96F63 343 aaPredicted RBP6.18□□□□□ -1.42
NPAS3-212ENST00000552696 RFX1P22670 979 aa6.17□□□□□ -1.42
NPAS3-212ENST00000552696 RNF144AP50876 292 aaPredicted RBP6.17□□□□□ -1.42
NPAS3-212ENST00000552696 OGFOD1Q8N543 542 aa6.17□□□□□ -1.42
NPAS3-212ENST00000552696 ESYT1Q9BSJ8 1104 aa6.17□□□□□ -1.42
NPAS3-212ENST00000552696 DNAAF2Q9NVR5 837 aaKnown RBP6.17□□□□□ -1.42
NPAS3-212ENST00000552696 HRH3Q9Y5N1 445 aa6.17□□□□□ -1.42
NPAS3-212ENST00000552696 TMEM229AB2RXF0 380 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 SUPT5HO00267 1087 aaKnown RBP6.16□□□□□ -1.42
NPAS3-212ENST00000552696 INHAP05111 366 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 GPC1P35052 558 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 ATP1A2P50993 1020 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 TLR1Q15399 786 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.16□□□□□ -1.42
NPAS3-212ENST00000552696 SLC27A3Q5K4L6 730 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 TPCN2Q8NHX9 752 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 XAGE2Q96GT9 111 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 ZNF594Q96JF6 807 aaPredicted RBP6.16□□□□□ -1.42
NPAS3-212ENST00000552696 SERPINA10Q9UK55 444 aa6.16□□□□□ -1.42
NPAS3-212ENST00000552696 WASLO00401 505 aaPredicted RBP6.15□□□□□ -1.42
NPAS3-212ENST00000552696 RASA1P20936 1047 aa6.15□□□□□ -1.42
NPAS3-212ENST00000552696 CENPCQ03188 943 aa6.15□□□□□ -1.42
NPAS3-212ENST00000552696 CRTC2Q53ET0 693 aaPredicted RBP6.15□□□□□ -1.42
NPAS3-212ENST00000552696 KANK4Q5T7N3 995 aaPredicted RBP6.15□□□□□ -1.42
NPAS3-212ENST00000552696 LYSMD3Q7Z3D4 306 aa6.15□□□□□ -1.42
NPAS3-212ENST00000552696 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.42
NPAS3-212ENST00000552696 FHDC1Q9C0D6 1143 aaPredicted RBP6.15□□□□□ -1.42
NPAS3-212ENST00000552696 ZNF358Q9NW07 568 aa6.15□□□□□ -1.42
NPAS3-212ENST00000552696 SERTAD1Q9UHV2 236 aa6.15□□□□□ -1.42
NPAS3-212ENST00000552696 ZBTB7BO15156 539 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms