RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
CACNB3-223ENST00000552480 BCAR3O75815 825 aa16.41■□□□□ 0.22
CACNB3-223ENST00000552480 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
CACNB3-223ENST00000552480 CHRNA2Q15822 529 aa16.41■□□□□ 0.22
CACNB3-223ENST00000552480 MCM10Q7L590 875 aa16.41■□□□□ 0.22
CACNB3-223ENST00000552480 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
CACNB3-223ENST00000552480 PHLPP1O60346 1717 aa16.4■□□□□ 0.22
CACNB3-223ENST00000552480 GNAT3A8MTJ3 354 aa16.4■□□□□ 0.22
CACNB3-223ENST00000552480 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
CACNB3-223ENST00000552480 COL16A1Q07092 1604 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-223ENST00000552480 AMOTQ4VCS5 1084 aa16.39■□□□□ 0.21
CACNB3-223ENST00000552480 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-223ENST00000552480 CHL1O00533 1208 aa16.38■□□□□ 0.21
CACNB3-223ENST00000552480 TOM1O60784 492 aa16.38■□□□□ 0.21
CACNB3-223ENST00000552480 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
CACNB3-223ENST00000552480 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
CACNB3-223ENST00000552480 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
CACNB3-223ENST00000552480 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-223ENST00000552480 EXOC6Q8TAG9 804 aa16.37■□□□□ 0.21
CACNB3-223ENST00000552480 CERKQ8TCT0 537 aa16.37■□□□□ 0.21
CACNB3-223ENST00000552480 ALDH1L2Q3SY69 923 aa16.36■□□□□ 0.21
CACNB3-223ENST00000552480 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
CACNB3-223ENST00000552480 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
CACNB3-223ENST00000552480 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
CACNB3-223ENST00000552480 COL14A1Q05707 1796 aaKnown RBP16.36■□□□□ 0.21
CACNB3-223ENST00000552480 CANXP27824 592 aaKnown RBP16.35■□□□□ 0.21
CACNB3-223ENST00000552480 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
CACNB3-223ENST00000552480 WDR17Q8IZU2 1322 aa16.35■□□□□ 0.21
CACNB3-223ENST00000552480 CEMIPQ8WUJ3 1361 aa16.35■□□□□ 0.21
CACNB3-223ENST00000552480 OVOS2A0A0G2JMS6 1433 aa16.35■□□□□ 0.21
CACNB3-223ENST00000552480 PKD1L3Q7Z443 1732 aa16.34■□□□□ 0.21
CACNB3-223ENST00000552480 TATP17735 454 aaPredicted RBP16.34■□□□□ 0.21
CACNB3-223ENST00000552480 PDE3AQ14432 1141 aa16.34■□□□□ 0.21
CACNB3-223ENST00000552480 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
CACNB3-223ENST00000552480 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
CACNB3-223ENST00000552480 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
CACNB3-223ENST00000552480 MEGF6O75095 1541 aa16.34■□□□□ 0.21
CACNB3-223ENST00000552480 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
CACNB3-223ENST00000552480 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.21
CACNB3-223ENST00000552480 VAMP4O75379 141 aa16.33■□□□□ 0.2
CACNB3-223ENST00000552480 IL17REQ8NFR9 667 aa16.33■□□□□ 0.2
CACNB3-223ENST00000552480 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.2
CACNB3-223ENST00000552480 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
CACNB3-223ENST00000552480 TWISTNBQ3B726 338 aaPredicted RBP16.32■□□□□ 0.2
CACNB3-223ENST00000552480 C1orf141Q5JVX7 400 aa16.32■□□□□ 0.2
CACNB3-223ENST00000552480 FRAT1Q92837 279 aaPredicted RBP16.32■□□□□ 0.2
CACNB3-223ENST00000552480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACNB3-223ENST00000552480 TSPYL4Q9UJ04 414 aa16.32■□□□□ 0.2
CACNB3-223ENST00000552480 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
CACNB3-223ENST00000552480 BRPF1P55201 1214 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-223ENST00000552480 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
CACNB3-223ENST00000552480 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
CACNB3-223ENST00000552480 UBAP1LF5GYI3 381 aa16.3■□□□□ 0.2
CACNB3-223ENST00000552480 MS4A1P11836 297 aa16.3■□□□□ 0.2
CACNB3-223ENST00000552480 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
CACNB3-223ENST00000552480 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-223ENST00000552480 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
CACNB3-223ENST00000552480 B4GALNT3Q6L9W6 998 aa16.3■□□□□ 0.2
CACNB3-223ENST00000552480 PELP1Q8IZL8 1130 aaKnown RBP16.3■□□□□ 0.2
CACNB3-223ENST00000552480 FBXO41Q8TF61 875 aa16.3■□□□□ 0.2
CACNB3-223ENST00000552480 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
CACNB3-223ENST00000552480 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
CACNB3-223ENST00000552480 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
CACNB3-223ENST00000552480 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
CACNB3-223ENST00000552480 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
CACNB3-223ENST00000552480 KDM3BQ7LBC6 1761 aa16.28■□□□□ 0.2
CACNB3-223ENST00000552480 RNMTO43148 476 aaKnown RBP16.28■□□□□ 0.2
CACNB3-223ENST00000552480 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
CACNB3-223ENST00000552480 ELL2O00472 640 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-223ENST00000552480 IPO8O15397 1037 aaKnown RBP16.27■□□□□ 0.2
CACNB3-223ENST00000552480 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
CACNB3-223ENST00000552480 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.2
CACNB3-223ENST00000552480 SIPA1L3O60292 1781 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-223ENST00000552480 SCN11AQ9UI33 1791 aa16.26■□□□□ 0.19
CACNB3-223ENST00000552480 SOS1Q07889 1333 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-223ENST00000552480 EVA1CP58658 441 aa16.26■□□□□ 0.19
CACNB3-223ENST00000552480 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
CACNB3-223ENST00000552480 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
CACNB3-223ENST00000552480 STRN4Q9NRL3 753 aa16.26■□□□□ 0.19
CACNB3-223ENST00000552480 NOB1Q9ULX3 412 aaKnown RBP16.26■□□□□ 0.19
CACNB3-223ENST00000552480 PLCH1Q4KWH8 1693 aa16.26■□□□□ 0.19
CACNB3-223ENST00000552480 PHKG2P15735 406 aa16.25■□□□□ 0.19
CACNB3-223ENST00000552480 TEFQ10587 303 aa16.25■□□□□ 0.19
CACNB3-223ENST00000552480 KRT24Q2M2I5 525 aa16.25■□□□□ 0.19
CACNB3-223ENST00000552480 LARP1Q6PKG0 1096 aaKnown RBP16.25■□□□□ 0.19
CACNB3-223ENST00000552480 ATF7IPQ6VMQ6 1270 aa16.25■□□□□ 0.19
CACNB3-223ENST00000552480 DZIP1LQ8IYY4 767 aaKnown RBP16.25■□□□□ 0.19
CACNB3-223ENST00000552480 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
CACNB3-223ENST00000552480 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
CACNB3-223ENST00000552480 MRC1P22897 1456 aa16.24■□□□□ 0.19
CACNB3-223ENST00000552480 TRIM27P14373 513 aa16.24■□□□□ 0.19
CACNB3-223ENST00000552480 AAMPQ13685 434 aa16.24■□□□□ 0.19
CACNB3-223ENST00000552480 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
CACNB3-223ENST00000552480 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
CACNB3-223ENST00000552480 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
CACNB3-223ENST00000552480 KDM6AO15550 1401 aaPredicted RBP16.24■□□□□ 0.19
CACNB3-223ENST00000552480 NRAPQ86VF7 1730 aa16.23■□□□□ 0.19
CACNB3-223ENST00000552480 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
CACNB3-223ENST00000552480 RLBP1P12271 317 aa16.23■□□□□ 0.19
CACNB3-223ENST00000552480 IL2RBP14784 551 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms