RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 NSD3Q9BZ95 1437 aa8.12□□□□□ -1.11
CCDC65-204ENST00000552188 PYGBP11216 843 aa8.11□□□□□ -1.11
CCDC65-204ENST00000552188 CD44P16070 742 aaKnown RBP8.11□□□□□ -1.11
CCDC65-204ENST00000552188 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
CCDC65-204ENST00000552188 LTV1Q96GA3 475 aaPredicted RBP8.11□□□□□ -1.11
CCDC65-204ENST00000552188 NLRP2Q9NX02 1062 aa8.11□□□□□ -1.11
CCDC65-204ENST00000552188 AXIN2Q9Y2T1 843 aa8.11□□□□□ -1.11
CCDC65-204ENST00000552188 CGNL1Q0VF96 1302 aa8.1□□□□□ -1.11
CCDC65-204ENST00000552188 FYB1O15117 783 aa8.1□□□□□ -1.11
CCDC65-204ENST00000552188 DDB1Q16531 1140 aa8.1□□□□□ -1.11
CCDC65-204ENST00000552188 FAM182BQ5T319 152 aa8.1□□□□□ -1.11
CCDC65-204ENST00000552188 ANKRD24Q8TF21 1146 aa8.1□□□□□ -1.11
CCDC65-204ENST00000552188 CCDC7Q96M83 1385 aa8.1□□□□□ -1.11
CCDC65-204ENST00000552188 SBF2Q86WG5 1849 aa8.09□□□□□ -1.11
CCDC65-204ENST00000552188 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
CCDC65-204ENST00000552188 IP6K1Q92551 441 aa8.09□□□□□ -1.11
CCDC65-204ENST00000552188 CDCA7Q9BWT1 371 aaPredicted RBP8.09□□□□□ -1.11
CCDC65-204ENST00000552188 CARD10Q9BWT7 1032 aa8.09□□□□□ -1.11
CCDC65-204ENST00000552188 PANK3Q9H999 370 aa8.09□□□□□ -1.11
CCDC65-204ENST00000552188 BLMP54132 1417 aaPredicted RBP8.09□□□□□ -1.11
CCDC65-204ENST00000552188 SMG6Q86US8 1419 aaKnown RBP8.09□□□□□ -1.11
CCDC65-204ENST00000552188 LRRC37A3O60309 1634 aa8.08□□□□□ -1.12
CCDC65-204ENST00000552188 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
CCDC65-204ENST00000552188 HAX1O00165 279 aa8.08□□□□□ -1.12
CCDC65-204ENST00000552188 EXOC5O00471 708 aa8.08□□□□□ -1.12
CCDC65-204ENST00000552188 RGL2O15211 777 aa8.08□□□□□ -1.12
CCDC65-204ENST00000552188 PPM1GO15355 546 aaPredicted RBP8.08□□□□□ -1.12
CCDC65-204ENST00000552188 FBLN1P23142 703 aa8.08□□□□□ -1.12
CCDC65-204ENST00000552188 BAG6P46379 1132 aa8.08□□□□□ -1.12
CCDC65-204ENST00000552188 RRS1Q15050 365 aaKnown RBP8.08□□□□□ -1.12
CCDC65-204ENST00000552188 KNSTRNQ9Y448 316 aa8.08□□□□□ -1.12
CCDC65-204ENST00000552188 ERBB3P21860 1342 aa8.07□□□□□ -1.12
CCDC65-204ENST00000552188 MAP3K19Q56UN5 1328 aa8.07□□□□□ -1.12
CCDC65-204ENST00000552188 TNS1Q9HBL0 1735 aaKnown RBP8.07□□□□□ -1.12
CCDC65-204ENST00000552188 HOXC9P31274 260 aa8.07□□□□□ -1.12
CCDC65-204ENST00000552188 TNNT2P45379 298 aaPredicted RBP8.07□□□□□ -1.12
CCDC65-204ENST00000552188 CARD14Q9BXL6 1004 aa8.07□□□□□ -1.12
CCDC65-204ENST00000552188 RTL1A6NKG5 1358 aa8.07□□□□□ -1.12
CCDC65-204ENST00000552188 TRIM37O94972 964 aa8.06□□□□□ -1.12
CCDC65-204ENST00000552188 IL2RBP14784 551 aa8.06□□□□□ -1.12
CCDC65-204ENST00000552188 POTEHQ6S545 545 aa8.06□□□□□ -1.12
CCDC65-204ENST00000552188 MORC1Q86VD1 984 aa8.06□□□□□ -1.12
CCDC65-204ENST00000552188 KIF7Q2M1P5 1343 aa8.05□□□□□ -1.12
CCDC65-204ENST00000552188 OVOS2A0A0G2JMS6 1433 aa8.05□□□□□ -1.12
CCDC65-204ENST00000552188 C19orf67A6NJJ6 358 aa8.05□□□□□ -1.12
CCDC65-204ENST00000552188 APBA3O96018 575 aa8.05□□□□□ -1.12
CCDC65-204ENST00000552188 DEFB132Q7Z7B7 95 aa8.05□□□□□ -1.12
CCDC65-204ENST00000552188 PEAK1Q9H792 1746 aa8.05□□□□□ -1.12
CCDC65-204ENST00000552188 FLT4P35916 1363 aa8.05□□□□□ -1.12
CCDC65-204ENST00000552188 CNGB1Q14028 1251 aaPredicted RBP8.04□□□□□ -1.12
CCDC65-204ENST00000552188 PHF12Q96QT6 1004 aa8.04□□□□□ -1.12
CCDC65-204ENST00000552188 EMILIN1Q9Y6C2 1016 aa8.04□□□□□ -1.12
CCDC65-204ENST00000552188 NSD2O96028 1365 aa8.04□□□□□ -1.12
CCDC65-204ENST00000552188 KIF24Q5T7B8 1368 aa8.04□□□□□ -1.12
CCDC65-204ENST00000552188 INSRP06213 1382 aa8.03□□□□□ -1.12
CCDC65-204ENST00000552188 TATP17735 454 aaPredicted RBP8.03□□□□□ -1.12
CCDC65-204ENST00000552188 EN1Q05925 392 aaPredicted RBP8.03□□□□□ -1.12
CCDC65-204ENST00000552188 HSP90AB2PQ58FF8 381 aa8.03□□□□□ -1.12
CCDC65-204ENST00000552188 DDX54Q8TDD1 881 aaKnown RBP8.03□□□□□ -1.12
CCDC65-204ENST00000552188 RAPGEF4Q8WZA2 1011 aa8.03□□□□□ -1.12
CCDC65-204ENST00000552188 RNF25Q96BH1 459 aaPredicted RBP8.03□□□□□ -1.12
CCDC65-204ENST00000552188 TNS2Q63HR2 1409 aa8.03□□□□□ -1.12
CCDC65-204ENST00000552188 EVX2Q03828 476 aa8.02□□□□□ -1.13
CCDC65-204ENST00000552188 USHBP1Q8N6Y0 703 aa8.02□□□□□ -1.13
CCDC65-204ENST00000552188 DISP2A7MBM2 1401 aa8.02□□□□□ -1.13
CCDC65-204ENST00000552188 DOT1LQ8TEK3 1739 aa8.01□□□□□ -1.13
CCDC65-204ENST00000552188 EZH2Q15910 746 aaKnown RBP8.01□□□□□ -1.13
CCDC65-204ENST00000552188 CC2D1BQ5T0F9 858 aaKnown RBP8.01□□□□□ -1.13
CCDC65-204ENST00000552188 NBPF6Q5VWK0 638 aa8.01□□□□□ -1.13
CCDC65-204ENST00000552188 MARCH10Q8NA82 808 aaPredicted RBP8.01□□□□□ -1.13
CCDC65-204ENST00000552188 ZCRB1Q8TBF4 217 aaKnown RBP8.01□□□□□ -1.13
CCDC65-204ENST00000552188 ACSBG1Q96GR2 724 aa8.01□□□□□ -1.13
CCDC65-204ENST00000552188 NBPF4Q96M43 638 aa8.01□□□□□ -1.13
CCDC65-204ENST00000552188 NHSQ6T4R5 1651 aa8.01□□□□□ -1.13
CCDC65-204ENST00000552188 BTAF1O14981 1849 aa8.01□□□□□ -1.13
CCDC65-204ENST00000552188 WASHC2AQ641Q2 1341 aa8.01□□□□□ -1.13
CCDC65-204ENST00000552188 SHANK3Q9BYB0 1731 aa8□□□□□ -1.13
CCDC65-204ENST00000552188 RGPD3A6NKT7 1758 aaPredicted RBP8□□□□□ -1.13
CCDC65-204ENST00000552188 RGPD4Q7Z3J3 1758 aa8□□□□□ -1.13
CCDC65-204ENST00000552188 RREB1Q92766 1687 aa8□□□□□ -1.13
CCDC65-204ENST00000552188 NBPF14Q5TI25 921 aa8□□□□□ -1.13
CCDC65-204ENST00000552188 BCL11BQ9C0K0 894 aaPredicted RBP8□□□□□ -1.13
CCDC65-204ENST00000552188 POLKQ9UBT6 870 aa8□□□□□ -1.13
CCDC65-204ENST00000552188 PARD3Q8TEW0 1356 aa7.99□□□□□ -1.13
CCDC65-204ENST00000552188 MAP3K13O43283 966 aa7.99□□□□□ -1.13
CCDC65-204ENST00000552188 CHRM1P11229 460 aaPredicted RBP7.99□□□□□ -1.13
CCDC65-204ENST00000552188 PRKCSHP14314 528 aaPredicted RBP7.99□□□□□ -1.13
CCDC65-204ENST00000552188 ZEB1P37275 1124 aaPredicted RBP7.99□□□□□ -1.13
CCDC65-204ENST00000552188 NUP188Q5SRE5 1749 aa7.99□□□□□ -1.13
CCDC65-204ENST00000552188 SYTL4Q96C24 671 aaPredicted RBP7.99□□□□□ -1.13
CCDC65-204ENST00000552188 EP400Q96L91 3159 aa7.99□□□□□ -1.13
CCDC65-204ENST00000552188 ITGB4P16144 1822 aa7.99□□□□□ -1.13
CCDC65-204ENST00000552188 PKD1L3Q7Z443 1732 aa7.98□□□□□ -1.13
CCDC65-204ENST00000552188 RIOK3O14730 519 aaKnown RBP7.98□□□□□ -1.13
CCDC65-204ENST00000552188 ARXQ96QS3 562 aa7.98□□□□□ -1.13
CCDC65-204ENST00000552188 PCDHB8Q9UN66 801 aa7.98□□□□□ -1.13
CCDC65-204ENST00000552188 SPG7Q9UQ90 795 aa7.98□□□□□ -1.13
CCDC65-204ENST00000552188 PCDHB13Q9Y5F0 798 aa7.98□□□□□ -1.13
CCDC65-204ENST00000552188 VIRMAQ69YN4 1812 aaKnown RBP7.98□□□□□ -1.13
CCDC65-204ENST00000552188 MEGF6O75095 1541 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms