RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
SNRPF-204ENST00000552085 C5P01031 1676 aa18.31■□□□□ 0.52
SNRPF-204ENST00000552085 FSTL1Q12841 308 aa18.3■□□□□ 0.52
SNRPF-204ENST00000552085 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
SNRPF-204ENST00000552085 USP54Q70EL1 1684 aa18.29■□□□□ 0.52
SNRPF-204ENST00000552085 C16orf71Q8IYS4 520 aaPredicted RBP18.29■□□□□ 0.52
SNRPF-204ENST00000552085 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
SNRPF-204ENST00000552085 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
SNRPF-204ENST00000552085 ERBB3P21860 1342 aa18.28■□□□□ 0.52
SNRPF-204ENST00000552085 HSPA1AP0DMV8 641 aaKnown RBP18.28■□□□□ 0.52
SNRPF-204ENST00000552085 HSPA1BP0DMV9 641 aaKnown RBP18.28■□□□□ 0.52
SNRPF-204ENST00000552085 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
SNRPF-204ENST00000552085 ANKRD36BQ8N2N9 1353 aa18.28■□□□□ 0.52
SNRPF-204ENST00000552085 TAF1LQ8IZX4 1826 aa18.28■□□□□ 0.52
SNRPF-204ENST00000552085 LTN1O94822 1766 aa18.27■□□□□ 0.52
SNRPF-204ENST00000552085 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
SNRPF-204ENST00000552085 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
SNRPF-204ENST00000552085 NSD2O96028 1365 aa18.27■□□□□ 0.51
SNRPF-204ENST00000552085 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
SNRPF-204ENST00000552085 TTC21BQ7Z4L5 1316 aa18.24■□□□□ 0.51
SNRPF-204ENST00000552085 KIAA1210Q9ULL0 1709 aa18.23■□□□□ 0.51
SNRPF-204ENST00000552085 PCNTO95613 3336 aa18.23■□□□□ 0.51
SNRPF-204ENST00000552085 N4BP2Q86UW6 1770 aaPredicted RBP18.22■□□□□ 0.51
SNRPF-204ENST00000552085 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
SNRPF-204ENST00000552085 KIF13BQ9NQT8 1826 aa18.21■□□□□ 0.51
SNRPF-204ENST00000552085 PKD1L3Q7Z443 1732 aa18.21■□□□□ 0.51
SNRPF-204ENST00000552085 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
SNRPF-204ENST00000552085 USP47Q96K76 1375 aa18.2■□□□□ 0.5
SNRPF-204ENST00000552085 ANKRD24Q8TF21 1146 aa18.2■□□□□ 0.5
SNRPF-204ENST00000552085 TNRC6CQ9HCJ0 1690 aaKnown RBP18.19■□□□□ 0.5
SNRPF-204ENST00000552085 UBR3Q6ZT12 1888 aa18.19■□□□□ 0.5
SNRPF-204ENST00000552085 TOGARAM1Q9Y4F4 1720 aa18.19■□□□□ 0.5
SNRPF-204ENST00000552085 FAM208AQ9UK61 1670 aaKnown RBP18.18■□□□□ 0.5
SNRPF-204ENST00000552085 C10orf71Q711Q0 1435 aa18.18■□□□□ 0.5
SNRPF-204ENST00000552085 HMGB2P26583 209 aaKnown RBP18.18■□□□□ 0.5
SNRPF-204ENST00000552085 ZNF692Q9BU19 519 aaPredicted RBP18.18■□□□□ 0.5
SNRPF-204ENST00000552085 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
SNRPF-204ENST00000552085 C4BP0C0L5 1744 aa18.18■□□□□ 0.5
SNRPF-204ENST00000552085 ARHGAP27Q6ZUM4 889 aa18.17■□□□□ 0.5
SNRPF-204ENST00000552085 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
SNRPF-204ENST00000552085 KCPQ6ZWJ8 1503 aa18.16■□□□□ 0.5
SNRPF-204ENST00000552085 PXDNLA1KZ92 1463 aa18.15■□□□□ 0.5
SNRPF-204ENST00000552085 SMC1BQ8NDV3 1235 aa18.15■□□□□ 0.5
SNRPF-204ENST00000552085 BCS1LQ9Y276 419 aa18.15■□□□□ 0.5
SNRPF-204ENST00000552085 BRCA1P38398 1863 aaKnown RBP18.15■□□□□ 0.5
SNRPF-204ENST00000552085 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
SNRPF-204ENST00000552085 ARFGEF1Q9Y6D6 1849 aa18.13■□□□□ 0.49
SNRPF-204ENST00000552085 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
SNRPF-204ENST00000552085 C9orf131Q5VYM1 1079 aa18.12■□□□□ 0.49
SNRPF-204ENST00000552085 AK7Q96M32 723 aa18.12■□□□□ 0.49
SNRPF-204ENST00000552085 RRAGCQ9HB90 399 aa18.12■□□□□ 0.49
SNRPF-204ENST00000552085 AMIGO3Q86WK7 504 aa18.11■□□□□ 0.49
SNRPF-204ENST00000552085 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
SNRPF-204ENST00000552085 USP31Q70CQ4 1352 aa18.1■□□□□ 0.49
SNRPF-204ENST00000552085 PHF14O94880 888 aa18.1■□□□□ 0.49
SNRPF-204ENST00000552085 TGFB2P61812 414 aa18.1■□□□□ 0.49
SNRPF-204ENST00000552085 FAM161AQ3B820 660 aa18.1■□□□□ 0.49
SNRPF-204ENST00000552085 NBPF1Q3BBV0 1214 aa18.1■□□□□ 0.49
SNRPF-204ENST00000552085 KTN1Q86UP2 1357 aaKnown RBP18.09■□□□□ 0.49
SNRPF-204ENST00000552085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.09■□□□□ 0.49
SNRPF-204ENST00000552085 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
SNRPF-204ENST00000552085 SBF1O95248 1867 aa18.09■□□□□ 0.49
SNRPF-204ENST00000552085 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
SNRPF-204ENST00000552085 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
SNRPF-204ENST00000552085 SMIM5Q71RC9 77 aa18.08■□□□□ 0.48
SNRPF-204ENST00000552085 EVC2Q86UK5 1308 aa18.07■□□□□ 0.48
SNRPF-204ENST00000552085 A0A0G2JLW4 131 aa18.07■□□□□ 0.48
SNRPF-204ENST00000552085 FCHSD2O94868 740 aa18.06■□□□□ 0.48
SNRPF-204ENST00000552085 SSFA2P28290 1259 aa18.05■□□□□ 0.48
SNRPF-204ENST00000552085 ITGB4P16144 1822 aa18.05■□□□□ 0.48
SNRPF-204ENST00000552085 MMP10P09238 476 aa18.04■□□□□ 0.48
SNRPF-204ENST00000552085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNRPF-204ENST00000552085 LTV1Q96GA3 475 aaPredicted RBP18.04■□□□□ 0.48
SNRPF-204ENST00000552085 PRDM10Q9NQV6 1147 aa18.04■□□□□ 0.48
SNRPF-204ENST00000552085 MEGF6O75095 1541 aa18.03■□□□□ 0.48
SNRPF-204ENST00000552085 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
SNRPF-204ENST00000552085 FOXN1O15353 648 aa18.02■□□□□ 0.48
SNRPF-204ENST00000552085 DPEP1P16444 411 aa18.02■□□□□ 0.48
SNRPF-204ENST00000552085 NME9Q86XW9 330 aa18.02■□□□□ 0.48
SNRPF-204ENST00000552085 IP6K1Q92551 441 aa18.02■□□□□ 0.48
SNRPF-204ENST00000552085 MAP2P11137 1827 aaKnown RBP18■□□□□ 0.47
SNRPF-204ENST00000552085 C4AP0C0L4 1744 aa17.99■□□□□ 0.47
SNRPF-204ENST00000552085 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
SNRPF-204ENST00000552085 MPRIPQ6WCQ1 1025 aa17.98■□□□□ 0.47
SNRPF-204ENST00000552085 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
SNRPF-204ENST00000552085 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
SNRPF-204ENST00000552085 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
SNRPF-204ENST00000552085 CTCFP49711 727 aaPredicted RBP17.96■□□□□ 0.47
SNRPF-204ENST00000552085 MLLT1Q03111 559 aaPredicted RBP17.96■□□□□ 0.47
SNRPF-204ENST00000552085 ABHD8Q96I13 439 aa17.96■□□□□ 0.47
SNRPF-204ENST00000552085 SBNO2Q9Y2G9 1366 aa17.95■□□□□ 0.46
SNRPF-204ENST00000552085 KCNA3P22001 575 aa17.95■□□□□ 0.46
SNRPF-204ENST00000552085 LINC00116Q8NCU8 138 aa17.95■□□□□ 0.46
SNRPF-204ENST00000552085 PIM2Q9P1W9 311 aa17.95■□□□□ 0.46
SNRPF-204ENST00000552085 MKRN1Q9UHC7 482 aaKnown RBP17.95■□□□□ 0.46
SNRPF-204ENST00000552085 CGNL1Q0VF96 1302 aa17.95■□□□□ 0.46
SNRPF-204ENST00000552085 ZC3H4Q9UPT8 1303 aaKnown RBP17.95■□□□□ 0.46
SNRPF-204ENST00000552085 GNPATO15228 680 aa17.94■□□□□ 0.46
SNRPF-204ENST00000552085 CCDC88AQ3V6T2 1871 aa17.93■□□□□ 0.46
SNRPF-204ENST00000552085 AIDAQ96BJ3 306 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms