RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GOLGB1Q14789 3259 aaKnown RBP20■□□□□ 0.79
CHMP1A-210ENST00000551981 SLC24A1O60721 1099 aa20■□□□□ 0.79
CHMP1A-210ENST00000551981 HOXC9P31274 260 aa20■□□□□ 0.79
CHMP1A-210ENST00000551981 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
CHMP1A-210ENST00000551981 MAP3K19Q56UN5 1328 aa20■□□□□ 0.79
CHMP1A-210ENST00000551981 RGPD2P0DJD1 1756 aa19.99■□□□□ 0.79
CHMP1A-210ENST00000551981 ZCRB1Q8TBF4 217 aaKnown RBP19.99■□□□□ 0.79
CHMP1A-210ENST00000551981 SHANK3Q9BYB0 1731 aa19.99■□□□□ 0.79
CHMP1A-210ENST00000551981 RTL1A6NKG5 1358 aa19.97■□□□□ 0.79
CHMP1A-210ENST00000551981 SENP3-EIF4A1A0A087X0R7 540 aa19.97■□□□□ 0.79
CHMP1A-210ENST00000551981 PELP1Q8IZL8 1130 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-210ENST00000551981 C1QTNF8P60827 252 aa19.96■□□□□ 0.79
CHMP1A-210ENST00000551981 CCNL1Q9UK58 526 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-210ENST00000551981 MEGF6O75095 1541 aa19.96■□□□□ 0.79
CHMP1A-210ENST00000551981 NSD2O96028 1365 aa19.95■□□□□ 0.79
CHMP1A-210ENST00000551981 KCNQ4P56696 695 aa19.95■□□□□ 0.78
CHMP1A-210ENST00000551981 TESK2Q96S53 571 aa19.95■□□□□ 0.78
CHMP1A-210ENST00000551981 CGNL1Q0VF96 1302 aa19.95■□□□□ 0.78
CHMP1A-210ENST00000551981 USP47Q96K76 1375 aa19.95■□□□□ 0.78
CHMP1A-210ENST00000551981 SMG6Q86US8 1419 aaKnown RBP19.94■□□□□ 0.78
CHMP1A-210ENST00000551981 ST20-MTHFSA0A0A6YYL1 179 aa19.94■□□□□ 0.78
CHMP1A-210ENST00000551981 MSH5O43196 834 aa19.93■□□□□ 0.78
CHMP1A-210ENST00000551981 FBLN1P23142 703 aa19.92■□□□□ 0.78
CHMP1A-210ENST00000551981 HMGB2P26583 209 aaKnown RBP19.92■□□□□ 0.78
CHMP1A-210ENST00000551981 RAPGEF4Q8WZA2 1011 aa19.92■□□□□ 0.78
CHMP1A-210ENST00000551981 GIGYF1O75420 1035 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-210ENST00000551981 NLGN2Q8NFZ4 835 aa19.91■□□□□ 0.78
CHMP1A-210ENST00000551981 NBPF6Q5VWK0 638 aa19.9■□□□□ 0.78
CHMP1A-210ENST00000551981 NBPF4Q96M43 638 aa19.9■□□□□ 0.78
CHMP1A-210ENST00000551981 C5P01031 1676 aa19.9■□□□□ 0.78
CHMP1A-210ENST00000551981 GRIN3BO60391 1043 aa19.89■□□□□ 0.77
CHMP1A-210ENST00000551981 TATP17735 454 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-210ENST00000551981 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
CHMP1A-210ENST00000551981 USHBP1Q8N6Y0 703 aa19.88■□□□□ 0.77
CHMP1A-210ENST00000551981 PCDH11XQ9BZA7 1347 aa19.87■□□□□ 0.77
CHMP1A-210ENST00000551981 PCDH11YQ9BZA8 1340 aa19.87■□□□□ 0.77
CHMP1A-210ENST00000551981 COL23A1Q86Y22 540 aaPredicted RBP19.87■□□□□ 0.77
CHMP1A-210ENST00000551981 GGNBP2Q9H3C7 697 aa19.87■□□□□ 0.77
CHMP1A-210ENST00000551981 KIF20BQ96Q89 1820 aa19.87■□□□□ 0.77
CHMP1A-210ENST00000551981 FYB1O15117 783 aa19.86■□□□□ 0.77
CHMP1A-210ENST00000551981 FLAD1Q8NFF5 587 aa19.86■□□□□ 0.77
CHMP1A-210ENST00000551981 INSRP06213 1382 aa19.85■□□□□ 0.77
CHMP1A-210ENST00000551981 TMF1P82094 1093 aa19.85■□□□□ 0.77
CHMP1A-210ENST00000551981 TAF1LQ8IZX4 1826 aa19.85■□□□□ 0.77
CHMP1A-210ENST00000551981 FLT4P35916 1363 aa19.84■□□□□ 0.77
CHMP1A-210ENST00000551981 KIF24Q5T7B8 1368 aa19.84■□□□□ 0.77
CHMP1A-210ENST00000551981 MSL1Q68DK7 614 aa19.84■□□□□ 0.77
CHMP1A-210ENST00000551981 PALLDQ8WX93 1383 aa19.83■□□□□ 0.77
CHMP1A-210ENST00000551981 YBX3P16989 372 aaKnown RBP eCLIP19.83■□□□□ 0.776e-9■■□□□ 14.5
CHMP1A-210ENST00000551981 HSP90AB2PQ58FF8 381 aa19.82■□□□□ 0.76
CHMP1A-210ENST00000551981 MPRIPQ6WCQ1 1025 aa19.82■□□□□ 0.76
CHMP1A-210ENST00000551981 CD2APQ9Y5K6 639 aa19.82■□□□□ 0.76
CHMP1A-210ENST00000551981 CDCA8Q53HL2 280 aa19.81■□□□□ 0.76
CHMP1A-210ENST00000551981 SMARCC1Q92922 1105 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-210ENST00000551981 ITGB4P16144 1822 aa19.81■□□□□ 0.76
CHMP1A-210ENST00000551981 C4BP0C0L5 1744 aa19.79■□□□□ 0.76
CHMP1A-210ENST00000551981 AK7Q96M32 723 aa19.79■□□□□ 0.76
CHMP1A-210ENST00000551981 PKD1L3Q7Z443 1732 aa19.79■□□□□ 0.76
CHMP1A-210ENST00000551981 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
CHMP1A-210ENST00000551981 CEP350Q5VT06 3117 aa19.78■□□□□ 0.76
CHMP1A-210ENST00000551981 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
CHMP1A-210ENST00000551981 CYP27B1O15528 508 aa19.77■□□□□ 0.76
CHMP1A-210ENST00000551981 ATP10DQ9P241 1426 aa19.76■□□□□ 0.75
CHMP1A-210ENST00000551981 UBR3Q6ZT12 1888 aa19.75■□□□□ 0.75
CHMP1A-210ENST00000551981 SPG7Q9UQ90 795 aa19.74■□□□□ 0.75
CHMP1A-210ENST00000551981 EMILIN1Q9Y6C2 1016 aa19.73■□□□□ 0.75
CHMP1A-210ENST00000551981 ANKRD26Q9UPS8 1709 aa19.73■□□□□ 0.75
CHMP1A-210ENST00000551981 PHF14O94880 888 aa19.72■□□□□ 0.75
CHMP1A-210ENST00000551981 NCAPD2Q15021 1401 aa19.72■□□□□ 0.75
CHMP1A-210ENST00000551981 NKX1-1Q15270 411 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-210ENST00000551981 PIGBQ92521 554 aa19.72■□□□□ 0.75
CHMP1A-210ENST00000551981 GPBP1L1Q9HC44 474 aaPredicted RBP19.72■□□□□ 0.75
CHMP1A-210ENST00000551981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-210ENST00000551981 PPM1GO15355 546 aaPredicted RBP19.71■□□□□ 0.75
CHMP1A-210ENST00000551981 SSFA2P28290 1259 aa19.71■□□□□ 0.75
CHMP1A-210ENST00000551981 MAP2P11137 1827 aaKnown RBP19.7■□□□□ 0.74
CHMP1A-210ENST00000551981 TMOD3Q9NYL9 352 aa19.7■□□□□ 0.74
CHMP1A-210ENST00000551981 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
CHMP1A-210ENST00000551981 SIK1P57059 783 aa19.69■□□□□ 0.74
CHMP1A-210ENST00000551981 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
CHMP1A-210ENST00000551981 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
CHMP1A-210ENST00000551981 ADCY9O60503 1353 aa19.69■□□□□ 0.74
CHMP1A-210ENST00000551981 AMIGO3Q86WK7 504 aa19.68■□□□□ 0.74
CHMP1A-210ENST00000551981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.68■□□□□ 0.74
CHMP1A-210ENST00000551981 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
CHMP1A-210ENST00000551981 LINC00116Q8NCU8 138 aa19.67■□□□□ 0.74
CHMP1A-210ENST00000551981 GNPATO15228 680 aa19.65■□□□□ 0.74
CHMP1A-210ENST00000551981 IFNL2Q8IZJ0 200 aa19.65■□□□□ 0.74
CHMP1A-210ENST00000551981 ZNF526Q8TF50 670 aaPredicted RBP19.65■□□□□ 0.74
CHMP1A-210ENST00000551981 EYA1Q99502 592 aa19.65■□□□□ 0.74
CHMP1A-210ENST00000551981 ATP6V1AP38606 617 aa19.64■□□□□ 0.73
CHMP1A-210ENST00000551981 SMIM5Q71RC9 77 aa19.64■□□□□ 0.73
CHMP1A-210ENST00000551981 PHKG2P15735 406 aa19.63■□□□□ 0.73
CHMP1A-210ENST00000551981 WWC3Q9ULE0 1092 aa19.63■□□□□ 0.73
CHMP1A-210ENST00000551981 ASAP1Q9ULH1 1129 aa19.63■□□□□ 0.73
CHMP1A-210ENST00000551981 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
CHMP1A-210ENST00000551981 ITPK1Q13572 414 aa19.62■□□□□ 0.73
CHMP1A-210ENST00000551981 IFFO2Q5TF58 517 aa19.62■□□□□ 0.73
CHMP1A-210ENST00000551981 HSPA6P17066 643 aa19.61■□□□□ 0.73
CHMP1A-210ENST00000551981 POLKQ9UBT6 870 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms