RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 POLD1P28340 1107 aa30.59■■■□□ 2.49
SMARCD1-212ENST00000551966 AMPHP49418 695 aa30.59■■■□□ 2.49
SMARCD1-212ENST00000551966 KLHL34Q8N239 644 aa30.59■■■□□ 2.49
SMARCD1-212ENST00000551966 FAM208AQ9UK61 1670 aaKnown RBP30.58■■■□□ 2.49
SMARCD1-212ENST00000551966 ST20-MTHFSA0A0A6YYL1 179 aa30.58■■■□□ 2.49
SMARCD1-212ENST00000551966 C1QTNF8P60827 252 aa30.58■■■□□ 2.49
SMARCD1-212ENST00000551966 RGPD2P0DJD1 1756 aa30.57■■■□□ 2.48
SMARCD1-212ENST00000551966 NLGN2Q8NFZ4 835 aa30.56■■■□□ 2.48
SMARCD1-212ENST00000551966 TUBGCP6Q96RT7 1819 aa30.56■■■□□ 2.48
SMARCD1-212ENST00000551966 NBPF6Q5VWK0 638 aa30.55■■■□□ 2.48
SMARCD1-212ENST00000551966 NBPF4Q96M43 638 aa30.55■■■□□ 2.48
SMARCD1-212ENST00000551966 MEGF6O75095 1541 aa30.55■■■□□ 2.48
SMARCD1-212ENST00000551966 LY75O60449 1722 aa30.54■■■□□ 2.48
SMARCD1-212ENST00000551966 DOT1LQ8TEK3 1739 aa30.54■■■□□ 2.48
SMARCD1-212ENST00000551966 SHANK3Q9BYB0 1731 aa30.54■■■□□ 2.48
SMARCD1-212ENST00000551966 TONSLQ96HA7 1378 aa30.54■■■□□ 2.48
SMARCD1-212ENST00000551966 CCNL1Q9UK58 526 aaPredicted RBP30.53■■■□□ 2.48
SMARCD1-212ENST00000551966 SENP3-EIF4A1A0A087X0R7 540 aa30.52■■■□□ 2.48
SMARCD1-212ENST00000551966 RRS1Q15050 365 aaKnown RBP30.52■■■□□ 2.48
SMARCD1-212ENST00000551966 PELP1Q8IZL8 1130 aaKnown RBP30.52■■■□□ 2.48
SMARCD1-212ENST00000551966 COL23A1Q86Y22 540 aaPredicted RBP30.51■■■□□ 2.47
SMARCD1-212ENST00000551966 USHBP1Q8N6Y0 703 aa30.5■■■□□ 2.47
SMARCD1-212ENST00000551966 FYB1O15117 783 aa30.49■■■□□ 2.47
SMARCD1-212ENST00000551966 GGNBP2Q9H3C7 697 aa30.47■■■□□ 2.47
SMARCD1-212ENST00000551966 YBX3P16989 372 aaKnown RBP eCLIP30.45■■■□□ 2.47
SMARCD1-212ENST00000551966 RTL1A6NKG5 1358 aa30.44■■■□□ 2.46
SMARCD1-212ENST00000551966 USP47Q96K76 1375 aa30.44■■■□□ 2.46
SMARCD1-212ENST00000551966 MSH5O43196 834 aa30.44■■■□□ 2.46
SMARCD1-212ENST00000551966 SLC24A1O60721 1099 aa30.43■■■□□ 2.46
SMARCD1-212ENST00000551966 CGNL1Q0VF96 1302 aa30.43■■■□□ 2.46
SMARCD1-212ENST00000551966 HSP90AB2PQ58FF8 381 aa30.41■■■□□ 2.46
SMARCD1-212ENST00000551966 MSL1Q68DK7 614 aa30.41■■■□□ 2.46
SMARCD1-212ENST00000551966 RAPGEF4Q8WZA2 1011 aa30.41■■■□□ 2.46
SMARCD1-212ENST00000551966 GIGYF1O75420 1035 aaPredicted RBP30.39■■■□□ 2.46
SMARCD1-212ENST00000551966 TATP17735 454 aaPredicted RBP30.39■■■□□ 2.46
SMARCD1-212ENST00000551966 GRIN3BO60391 1043 aa30.37■■■□□ 2.45
SMARCD1-212ENST00000551966 GOLGB1Q14789 3259 aaKnown RBP30.37■■■□□ 2.45
SMARCD1-212ENST00000551966 INSRP06213 1382 aa30.36■■■□□ 2.45
SMARCD1-212ENST00000551966 CYP27B1O15528 508 aa30.35■■■□□ 2.45
SMARCD1-212ENST00000551966 MPRIPQ6WCQ1 1025 aa30.34■■■□□ 2.45
SMARCD1-212ENST00000551966 PCDH11XQ9BZA7 1347 aa30.33■■■□□ 2.45
SMARCD1-212ENST00000551966 PCDH11YQ9BZA8 1340 aa30.33■■■□□ 2.45
SMARCD1-212ENST00000551966 TMF1P82094 1093 aa30.33■■■□□ 2.45
SMARCD1-212ENST00000551966 SMG6Q86US8 1419 aaKnown RBP30.32■■■□□ 2.44
SMARCD1-212ENST00000551966 PALLDQ8WX93 1383 aa30.32■■■□□ 2.44
SMARCD1-212ENST00000551966 C5P01031 1676 aa30.31■■■□□ 2.44
SMARCD1-212ENST00000551966 AMIGO3Q86WK7 504 aa30.3■■■□□ 2.44
SMARCD1-212ENST00000551966 FLAD1Q8NFF5 587 aa30.3■■■□□ 2.44
SMARCD1-212ENST00000551966 CD2APQ9Y5K6 639 aa30.3■■■□□ 2.44
SMARCD1-212ENST00000551966 CARD14Q9BXL6 1004 aa30.29■■■□□ 2.44
SMARCD1-212ENST00000551966 TAF1LQ8IZX4 1826 aa30.29■■■□□ 2.44
SMARCD1-212ENST00000551966 FLT4P35916 1363 aa30.28■■■□□ 2.44
SMARCD1-212ENST00000551966 SMIM5Q71RC9 77 aa30.28■■■□□ 2.44
SMARCD1-212ENST00000551966 PIGBQ92521 554 aa30.26■■■□□ 2.43
SMARCD1-212ENST00000551966 EMILIN1Q9Y6C2 1016 aa30.26■■■□□ 2.43
SMARCD1-212ENST00000551966 KIF24Q5T7B8 1368 aa30.26■■■□□ 2.43
SMARCD1-212ENST00000551966 HMGB2P26583 209 aaKnown RBP30.24■■■□□ 2.43
SMARCD1-212ENST00000551966 SMARCC1Q92922 1105 aaPredicted RBP30.24■■■□□ 2.43
SMARCD1-212ENST00000551966 TOGARAM1Q9Y4F4 1720 aa30.24■■■□□ 2.43
SMARCD1-212ENST00000551966 NKX1-1Q15270 411 aaPredicted RBP30.23■■■□□ 2.43
SMARCD1-212ENST00000551966 ITGB4P16144 1822 aa30.22■■■□□ 2.43
SMARCD1-212ENST00000551966 KIF20BQ96Q89 1820 aa30.22■■■□□ 2.43
SMARCD1-212ENST00000551966 C4BP0C0L5 1744 aa30.22■■■□□ 2.43
SMARCD1-212ENST00000551966 ATP10DQ9P241 1426 aa30.22■■■□□ 2.43
SMARCD1-212ENST00000551966 AK7Q96M32 723 aa30.21■■■□□ 2.43
SMARCD1-212ENST00000551966 PHF14O94880 888 aa30.19■■■□□ 2.42
SMARCD1-212ENST00000551966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.18■■■□□ 2.42
SMARCD1-212ENST00000551966 CDCA8Q53HL2 280 aa30.18■■■□□ 2.42
SMARCD1-212ENST00000551966 NCAPD2Q15021 1401 aa30.18■■■□□ 2.42
SMARCD1-212ENST00000551966 PKD1L3Q7Z443 1732 aa30.17■■■□□ 2.42
SMARCD1-212ENST00000551966 PPM1GO15355 546 aaPredicted RBP30.16■■■□□ 2.42
SMARCD1-212ENST00000551966 LINC00116Q8NCU8 138 aa30.16■■■□□ 2.42
SMARCD1-212ENST00000551966 UBR3Q6ZT12 1888 aa30.15■■■□□ 2.42
SMARCD1-212ENST00000551966 EYA1Q99502 592 aa30.15■■■□□ 2.42
SMARCD1-212ENST00000551966 WWC3Q9ULE0 1092 aa30.15■■■□□ 2.42
SMARCD1-212ENST00000551966 SPG7Q9UQ90 795 aa30.15■■■□□ 2.42
SMARCD1-212ENST00000551966 MAP2P11137 1827 aaKnown RBP30.15■■■□□ 2.42
SMARCD1-212ENST00000551966 NSD3Q9BZ95 1437 aa30.14■■■□□ 2.42
SMARCD1-212ENST00000551966 LOC102724428A0A0B4J2F2 783 aa30.14■■■□□ 2.42
SMARCD1-212ENST00000551966 SIK1P57059 783 aa30.14■■■□□ 2.42
SMARCD1-212ENST00000551966 WASHC2AQ641Q2 1341 aa30.14■■■□□ 2.42
SMARCD1-212ENST00000551966 ADCY9O60503 1353 aa30.14■■■□□ 2.41
SMARCD1-212ENST00000551966 ASAP1Q9ULH1 1129 aa30.13■■■□□ 2.41
SMARCD1-212ENST00000551966 IGSF1Q8N6C5 1336 aa30.13■■■□□ 2.41
SMARCD1-212ENST00000551966 SSFA2P28290 1259 aa30.12■■■□□ 2.41
SMARCD1-212ENST00000551966 ITPK1Q13572 414 aa30.12■■■□□ 2.41
SMARCD1-212ENST00000551966 GPBP1L1Q9HC44 474 aaPredicted RBP30.12■■■□□ 2.41
SMARCD1-212ENST00000551966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.1■■■□□ 2.417e-6■■□□□ 12.8
SMARCD1-212ENST00000551966 ZNF526Q8TF50 670 aaPredicted RBP30.09■■■□□ 2.41
SMARCD1-212ENST00000551966 TMOD3Q9NYL9 352 aa30.09■■■□□ 2.41
SMARCD1-212ENST00000551966 PHKG2P15735 406 aa30.08■■■□□ 2.41
SMARCD1-212ENST00000551966 POLKQ9UBT6 870 aa30.08■■■□□ 2.41
SMARCD1-212ENST00000551966 ATP6V1AP38606 617 aa30.07■■■□□ 2.4
SMARCD1-212ENST00000551966 ATG3Q9NT62 314 aa30.07■■■□□ 2.4
SMARCD1-212ENST00000551966 CEP350Q5VT06 3117 aa30.06■■■□□ 2.4
SMARCD1-212ENST00000551966 IFNL2Q8IZJ0 200 aa30.06■■■□□ 2.4
SMARCD1-212ENST00000551966 GNPATO15228 680 aa30.05■■■□□ 2.4
SMARCD1-212ENST00000551966 IFFO2Q5TF58 517 aa30.05■■■□□ 2.4
SMARCD1-212ENST00000551966 ANKRD26Q9UPS8 1709 aa30.05■■■□□ 2.4
SMARCD1-212ENST00000551966 SLC4A9Q96Q91 983 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms