RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ANP32CO43423 234 aa25.03■■□□□ 1.6
DDX54-209ENST00000551912 AEBP1Q8IUX7 1158 aa25.03■■□□□ 1.6
DDX54-209ENST00000551912 MARCH10Q8NA82 808 aaPredicted RBP25.03■■□□□ 1.6
DDX54-209ENST00000551912 SOCS7O14512 581 aa25.02■■□□□ 1.6
DDX54-209ENST00000551912 FAM196AQ6ZSG2 479 aa25.02■■□□□ 1.6
DDX54-209ENST00000551912 KDRP35968 1356 aa25.02■■□□□ 1.6
DDX54-209ENST00000551912 HMOX1P09601 288 aa25■■□□□ 1.59
DDX54-209ENST00000551912 PLEKHG2Q9H7P9 1386 aa25■■□□□ 1.59
DDX54-209ENST00000551912 DDX54Q8TDD1 881 aaKnown RBP24.99■■□□□ 1.59
DDX54-209ENST00000551912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.98■■□□□ 1.59
DDX54-209ENST00000551912 SPG7Q9UQ90 795 aa24.98■■□□□ 1.59
DDX54-209ENST00000551912 PCDH11XQ9BZA7 1347 aa24.97■■□□□ 1.59
DDX54-209ENST00000551912 PCDH11YQ9BZA8 1340 aa24.97■■□□□ 1.59
DDX54-209ENST00000551912 UPF1Q92900 1129 aaKnown RBP eCLIP24.97■■□□□ 1.59
DDX54-209ENST00000551912 PKD1L3Q7Z443 1732 aa24.96■■□□□ 1.59
DDX54-209ENST00000551912 SHANK3Q9BYB0 1731 aa24.96■■□□□ 1.59
DDX54-209ENST00000551912 U2AF1L5P0DN76 240 aaPredicted RBP24.96■■□□□ 1.59
DDX54-209ENST00000551912 U2AF1Q01081 240 aaKnown RBP eCLIP24.96■■□□□ 1.59
DDX54-209ENST00000551912 BCL9O00512 1426 aa24.95■■□□□ 1.59
DDX54-209ENST00000551912 PLEKHO1Q53GL0 409 aaPredicted RBP24.95■■□□□ 1.58
DDX54-209ENST00000551912 AMOTQ4VCS5 1084 aa24.94■■□□□ 1.58
DDX54-209ENST00000551912 CCDC125Q86Z20 511 aa24.93■■□□□ 1.58
DDX54-209ENST00000551912 CYP27B1O15528 508 aa24.92■■□□□ 1.58
DDX54-209ENST00000551912 TRIM37O94972 964 aa24.9■■□□□ 1.58
DDX54-209ENST00000551912 RSPH6AQ9H0K4 717 aa24.9■■□□□ 1.58
DDX54-209ENST00000551912 FCHSD2O94868 740 aa24.89■■□□□ 1.58
DDX54-209ENST00000551912 SF3B2Q13435 895 aaKnown RBP24.89■■□□□ 1.58
DDX54-209ENST00000551912 IFNL2Q8IZJ0 200 aa24.89■■□□□ 1.58
DDX54-209ENST00000551912 PRKAR2BP31323 418 aa24.88■■□□□ 1.57
DDX54-209ENST00000551912 ZNF530Q6P9A1 599 aaPredicted RBP24.88■■□□□ 1.57
DDX54-209ENST00000551912 SBF2Q86WG5 1849 aa24.87■■□□□ 1.57
DDX54-209ENST00000551912 PHKG2P15735 406 aa24.87■■□□□ 1.57
DDX54-209ENST00000551912 ACSBG1Q96GR2 724 aa24.86■■□□□ 1.57
DDX54-209ENST00000551912 NKX1-1Q15270 411 aaPredicted RBP24.85■■□□□ 1.57
DDX54-209ENST00000551912 C1orf141Q5JVX7 400 aa24.85■■□□□ 1.57
DDX54-209ENST00000551912 BCL11BQ9C0K0 894 aaPredicted RBP24.85■■□□□ 1.57
DDX54-209ENST00000551912 WDR43Q15061 677 aaKnown RBP eCLIP24.84■■□□□ 1.57
DDX54-209ENST00000551912 KAT6BQ8WYB5 2073 aa24.84■■□□□ 1.57
DDX54-209ENST00000551912 HSP90AB1P08238 724 aaKnown RBP24.83■■□□□ 1.57
DDX54-209ENST00000551912 MTHFSDQ2M296 383 aaKnown RBP24.83■■□□□ 1.57
DDX54-209ENST00000551912 PNNQ9H307 717 aaKnown RBP24.83■■□□□ 1.57
DDX54-209ENST00000551912 KCNQ2O43526 872 aa24.82■■□□□ 1.56
DDX54-209ENST00000551912 NHSQ6T4R5 1651 aa24.81■■□□□ 1.56
DDX54-209ENST00000551912 TNS1Q9HBL0 1735 aaKnown RBP24.81■■□□□ 1.56
DDX54-209ENST00000551912 NEFMP07197 916 aa24.81■■□□□ 1.56
DDX54-209ENST00000551912 CCDC184Q52MB2 194 aa24.81■■□□□ 1.56
DDX54-209ENST00000551912 AKAP4Q5JQC9 854 aa24.81■■□□□ 1.56
DDX54-209ENST00000551912 GAS2L2Q8NHY3 880 aa24.81■■□□□ 1.56
DDX54-209ENST00000551912 PHACTR3Q96KR7 559 aa24.81■■□□□ 1.56
DDX54-209ENST00000551912 DOT1LQ8TEK3 1739 aa24.81■■□□□ 1.56
DDX54-209ENST00000551912 APBA3O96018 575 aa24.8■■□□□ 1.56
DDX54-209ENST00000551912 BAG6P46379 1132 aa24.8■■□□□ 1.56
DDX54-209ENST00000551912 PRIM1P49642 420 aaKnown RBP24.8■■□□□ 1.56
DDX54-209ENST00000551912 DIEXFQ68CQ4 756 aaKnown RBP24.8■■□□□ 1.56
DDX54-209ENST00000551912 PTF1AQ7RTS3 328 aa24.8■■□□□ 1.56
DDX54-209ENST00000551912 SYTL4Q96C24 671 aaPredicted RBP24.8■■□□□ 1.56
DDX54-209ENST00000551912 MRS2Q9HD23 443 aa24.8■■□□□ 1.56
DDX54-209ENST00000551912 DCAF5Q96JK2 942 aa24.79■■□□□ 1.56
DDX54-209ENST00000551912 DEFB132Q7Z7B7 95 aa24.77■■□□□ 1.56
DDX54-209ENST00000551912 PLEKHF1Q96S99 279 aa24.77■■□□□ 1.56
DDX54-209ENST00000551912 ADAMTS8Q9UP79 889 aa24.77■■□□□ 1.56
DDX54-209ENST00000551912 TOGARAM1Q9Y4F4 1720 aa24.75■■□□□ 1.55
DDX54-209ENST00000551912 MPRIPQ6WCQ1 1025 aa24.75■■□□□ 1.55
DDX54-209ENST00000551912 MAPK8IP3Q9UPT6 1336 aa24.75■■□□□ 1.55
DDX54-209ENST00000551912 KDM6AO15550 1401 aaPredicted RBP24.75■■□□□ 1.55
DDX54-209ENST00000551912 EN1Q05925 392 aaPredicted RBP24.74■■□□□ 1.55
DDX54-209ENST00000551912 MAP3K5Q99683 1374 aa24.73■■□□□ 1.55
DDX54-209ENST00000551912 GNAT3A8MTJ3 354 aa24.73■■□□□ 1.55
DDX54-209ENST00000551912 ERVV-2B6SEH9 535 aa24.73■■□□□ 1.55
DDX54-209ENST00000551912 BTAF1O14981 1849 aa24.72■■□□□ 1.55
DDX54-209ENST00000551912 PLSCR1O15162 318 aa24.72■■□□□ 1.55
DDX54-209ENST00000551912 TMOD3Q9NYL9 352 aa24.72■■□□□ 1.55
DDX54-209ENST00000551912 ITGB4P16144 1822 aa24.71■■□□□ 1.55
DDX54-209ENST00000551912 PNISRQ8TF01 805 aaKnown RBP24.71■■□□□ 1.55
DDX54-209ENST00000551912 RNMTO43148 476 aaKnown RBP24.7■■□□□ 1.54
DDX54-209ENST00000551912 CCDC146Q8IYE0 955 aa24.7■■□□□ 1.54
DDX54-209ENST00000551912 CAMKK2Q96RR4 588 aa24.7■■□□□ 1.54
DDX54-209ENST00000551912 LGR6Q9HBX8 967 aa24.7■■□□□ 1.54
DDX54-209ENST00000551912 CABP4P57796 275 aa24.69■■□□□ 1.54
DDX54-209ENST00000551912 EZH2Q15910 746 aaKnown RBP24.69■■□□□ 1.54
DDX54-209ENST00000551912 NFE2L2Q16236 605 aa24.69■■□□□ 1.54
DDX54-209ENST00000551912 PIGBQ92521 554 aa24.69■■□□□ 1.54
DDX54-209ENST00000551912 RUNDC1Q96C34 613 aa24.69■■□□□ 1.54
DDX54-209ENST00000551912 SCN11AQ9UI33 1791 aa24.69■■□□□ 1.54
DDX54-209ENST00000551912 RTF1Q92541 710 aaKnown RBP24.67■■□□□ 1.54
DDX54-209ENST00000551912 RGPD3A6NKT7 1758 aaPredicted RBP24.67■■□□□ 1.54
DDX54-209ENST00000551912 RGPD4Q7Z3J3 1758 aa24.67■■□□□ 1.54
DDX54-209ENST00000551912 ADAMTS7Q9UKP4 1686 aa24.66■■□□□ 1.54
DDX54-209ENST00000551912 HTATSF1O43719 755 aaKnown RBP24.65■■□□□ 1.54
DDX54-209ENST00000551912 NFATC2IPQ8NCF5 419 aa24.65■■□□□ 1.54
DDX54-209ENST00000551912 IL17REQ8NFR9 667 aa24.65■■□□□ 1.54
DDX54-209ENST00000551912 SLC52A2Q9HAB3 445 aa24.65■■□□□ 1.54
DDX54-209ENST00000551912 VIRMAQ69YN4 1812 aaKnown RBP24.64■■□□□ 1.54
DDX54-209ENST00000551912 CCER2I3L3R5 266 aa24.64■■□□□ 1.54
DDX54-209ENST00000551912 TMPOP42166 694 aaKnown RBP24.63■■□□□ 1.53
DDX54-209ENST00000551912 TXNRD1Q16881 649 aa24.63■■□□□ 1.53
DDX54-209ENST00000551912 SMARCC1Q92922 1105 aaPredicted RBP24.63■■□□□ 1.53
DDX54-209ENST00000551912 MRC1P22897 1456 aa24.63■■□□□ 1.53
DDX54-209ENST00000551912 TEFQ10587 303 aa24.62■■□□□ 1.53
DDX54-209ENST00000551912 CEMIPQ8WUJ3 1361 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms