RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 ZNF521Q96K83 1311 aa10.03□□□□□ -0.8
USP44-206ENST00000551837 MAPK8IP3Q9UPT6 1336 aa10.03□□□□□ -0.8
USP44-206ENST00000551837 COL14A1Q05707 1796 aaKnown RBP10.02□□□□□ -0.81
USP44-206ENST00000551837 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
USP44-206ENST00000551837 RIPK4P57078 832 aa10.02□□□□□ -0.81
USP44-206ENST00000551837 HNRNPUQ00839 825 aaKnown RBP eCLIP10.02□□□□□ -0.81
USP44-206ENST00000551837 MTHFSDQ2M296 383 aaKnown RBP10.02□□□□□ -0.81
USP44-206ENST00000551837 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
USP44-206ENST00000551837 USP21Q9UK80 565 aa10.02□□□□□ -0.81
USP44-206ENST00000551837 SPG7Q9UQ90 795 aa10.02□□□□□ -0.81
USP44-206ENST00000551837 BCL9LQ86UU0 1499 aa10.02□□□□□ -0.81
USP44-206ENST00000551837 SPATA31A1Q5TZJ5 1347 aa10.02□□□□□ -0.81
USP44-206ENST00000551837 SPATA31A5Q5VU36 1347 aa10.02□□□□□ -0.81
USP44-206ENST00000551837 SPATA31A7Q8IWB4 1347 aa10.02□□□□□ -0.81
USP44-206ENST00000551837 IL2RBP14784 551 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 LMOD3Q0VAK6 560 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 AKAP4Q5JQC9 854 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 CCDC146Q8IYE0 955 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 C8orf37Q96NL8 207 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 STRN4Q9NRL3 753 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 RGPD1P0DJD0 1748 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 LTN1O94822 1766 aa10.01□□□□□ -0.81
USP44-206ENST00000551837 ABCA3Q99758 1704 aa10□□□□□ -0.81
USP44-206ENST00000551837 CALD1Q05682 793 aaKnown RBP10□□□□□ -0.81
USP44-206ENST00000551837 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
USP44-206ENST00000551837 TRMT2AQ8IZ69 625 aaKnown RBP10□□□□□ -0.81
USP44-206ENST00000551837 BABAM1Q9NWV8 329 aa10□□□□□ -0.81
USP44-206ENST00000551837 TRPC5Q9UL62 973 aaPredicted RBP10□□□□□ -0.81
USP44-206ENST00000551837 IL16Q14005 1332 aa10□□□□□ -0.81
USP44-206ENST00000551837 GNAT3A8MTJ3 354 aa9.99□□□□□ -0.81
USP44-206ENST00000551837 EXOC5O00471 708 aa9.99□□□□□ -0.81
USP44-206ENST00000551837 HSP90AB1P08238 724 aaKnown RBP9.99□□□□□ -0.81
USP44-206ENST00000551837 GOLGA2Q08379 1002 aa9.99□□□□□ -0.81
USP44-206ENST00000551837 MEX3CQ5U5Q3 659 aaKnown RBP9.99□□□□□ -0.81
USP44-206ENST00000551837 ZNF772Q68DY9 489 aaPredicted RBP9.99□□□□□ -0.81
USP44-206ENST00000551837 IFNL2Q8IZJ0 200 aa9.99□□□□□ -0.81
USP44-206ENST00000551837 USHBP1Q8N6Y0 703 aa9.99□□□□□ -0.81
USP44-206ENST00000551837 ZCRB1Q8TBF4 217 aaKnown RBP9.99□□□□□ -0.81
USP44-206ENST00000551837 GJD4Q96KN9 370 aaPredicted RBP9.99□□□□□ -0.81
USP44-206ENST00000551837 LRP6O75581 1613 aa9.99□□□□□ -0.81
USP44-206ENST00000551837 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
USP44-206ENST00000551837 ZNF853P0CG23 659 aa9.97□□□□□ -0.81
USP44-206ENST00000551837 SLFN5Q08AF3 891 aa9.97□□□□□ -0.81
USP44-206ENST00000551837 IL17REQ8NFR9 667 aa9.97□□□□□ -0.81
USP44-206ENST00000551837 QTRT2Q9H974 415 aaKnown RBP9.97□□□□□ -0.81
USP44-206ENST00000551837 ZNF219Q9P2Y4 722 aaPredicted RBP9.97□□□□□ -0.81
USP44-206ENST00000551837 AFF2P51816 1311 aa9.97□□□□□ -0.81
USP44-206ENST00000551837 FAM208AQ9UK61 1670 aaKnown RBP9.96□□□□□ -0.81
USP44-206ENST00000551837 NWD2Q9ULI1 1742 aa9.96□□□□□ -0.81
USP44-206ENST00000551837 E9PSI1 815 aa9.96□□□□□ -0.82
USP44-206ENST00000551837 PHKG2P15735 406 aa9.96□□□□□ -0.82
USP44-206ENST00000551837 NEUROD2Q15784 382 aa9.96□□□□□ -0.82
USP44-206ENST00000551837 C1orf141Q5JVX7 400 aa9.96□□□□□ -0.82
USP44-206ENST00000551837 DCAF5Q96JK2 942 aa9.96□□□□□ -0.82
USP44-206ENST00000551837 OVOS2A0A0G2JMS6 1433 aa9.96□□□□□ -0.82
USP44-206ENST00000551837 DISP2A7MBM2 1401 aa9.96□□□□□ -0.82
USP44-206ENST00000551837 CHL1O00533 1208 aa9.95□□□□□ -0.82
USP44-206ENST00000551837 CYP27B1O15528 508 aa9.95□□□□□ -0.82
USP44-206ENST00000551837 CFAP44Q96MT7 982 aa9.95□□□□□ -0.82
USP44-206ENST00000551837 RRP7AQ9Y3A4 280 aaKnown RBP9.95□□□□□ -0.82
USP44-206ENST00000551837 ATRNO75882 1429 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 CEMIPQ8WUJ3 1361 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 PCDH11XQ9BZA7 1347 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 PCDH11YQ9BZA8 1340 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 ERVV-2B6SEH9 535 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 RNMTO43148 476 aaKnown RBP9.94□□□□□ -0.82
USP44-206ENST00000551837 GNAI1P63096 354 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 TAF7Q15545 349 aaPredicted RBP9.94□□□□□ -0.82
USP44-206ENST00000551837 DDB1Q16531 1140 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 ZNF530Q6P9A1 599 aaPredicted RBP9.94□□□□□ -0.82
USP44-206ENST00000551837 YTHDC1Q96MU7 727 aaKnown RBP9.94□□□□□ -0.82
USP44-206ENST00000551837 RBM42Q9BTD8 480 aaKnown RBP9.94□□□□□ -0.82
USP44-206ENST00000551837 IFT57Q9NWB7 429 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
USP44-206ENST00000551837 CCDC9Q9Y3X0 531 aaKnown RBP9.94□□□□□ -0.82
USP44-206ENST00000551837 SALL2Q9Y467 1007 aaPredicted RBP9.94□□□□□ -0.82
USP44-206ENST00000551837 RGPD5Q99666 1765 aa9.93□□□□□ -0.82
USP44-206ENST00000551837 MAP3K5Q99683 1374 aa9.93□□□□□ -0.82
USP44-206ENST00000551837 RBM6P78332 1123 aaKnown RBP9.93□□□□□ -0.82
USP44-206ENST00000551837 DUSP27Q5VZP5 1158 aa9.93□□□□□ -0.82
USP44-206ENST00000551837 CHRDL2Q6WN34 429 aa9.93□□□□□ -0.82
USP44-206ENST00000551837 MYH16Q9H6N6 1097 aa9.93□□□□□ -0.82
USP44-206ENST00000551837 LGR6Q9HBX8 967 aa9.93□□□□□ -0.82
USP44-206ENST00000551837 MEGF6O75095 1541 aa9.92□□□□□ -0.82
USP44-206ENST00000551837 SOS1Q07889 1333 aaPredicted RBP9.91□□□□□ -0.82
USP44-206ENST00000551837 CENPBP07199 599 aaPredicted RBP9.91□□□□□ -0.82
USP44-206ENST00000551837 CT47B1P0C2W7 299 aaPredicted RBP9.91□□□□□ -0.82
USP44-206ENST00000551837 FAM98CQ17RN3 349 aaKnown RBP9.91□□□□□ -0.82
USP44-206ENST00000551837 MPRIPQ6WCQ1 1025 aa9.91□□□□□ -0.82
USP44-206ENST00000551837 MCM10Q7L590 875 aa9.91□□□□□ -0.82
USP44-206ENST00000551837 ILDR1Q86SU0 546 aaPredicted RBP9.91□□□□□ -0.82
USP44-206ENST00000551837 DDX54Q8TDD1 881 aaKnown RBP9.91□□□□□ -0.82
USP44-206ENST00000551837 ZNF428Q96B54 188 aa9.91□□□□□ -0.82
USP44-206ENST00000551837 CDCA7LQ96GN5 454 aa9.91□□□□□ -0.82
USP44-206ENST00000551837 RGS17Q9UGC6 210 aaPredicted RBP9.91□□□□□ -0.82
USP44-206ENST00000551837 BCL9O00512 1426 aa9.9□□□□□ -0.82
USP44-206ENST00000551837 NRAPQ86VF7 1730 aa9.9□□□□□ -0.82
USP44-206ENST00000551837 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.9□□□□□ -0.82
USP44-206ENST00000551837 RXRBP28702 533 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms