RNA–Protein interactions for RNA: ENST00000551681.1

RRN3P1-203, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene RRN3P1, Length 1,151 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-203ENST00000551681 MYBBP1AQ9BQG0 1328 aaKnown RBP13.02□□□□□ -0.33
RRN3P1-203ENST00000551681 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
RRN3P1-203ENST00000551681 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
RRN3P1-203ENST00000551681 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
RRN3P1-203ENST00000551681 BCL9O00512 1426 aa13.01□□□□□ -0.33
RRN3P1-203ENST00000551681 RGPD1P0DJD0 1748 aa13.01□□□□□ -0.33
RRN3P1-203ENST00000551681 KDRP35968 1356 aa13□□□□□ -0.33
RRN3P1-203ENST00000551681 ANP32CO43423 234 aa13□□□□□ -0.33
RRN3P1-203ENST00000551681 IL13P35225 146 aa13□□□□□ -0.33
RRN3P1-203ENST00000551681 AMOTQ4VCS5 1084 aa13□□□□□ -0.33
RRN3P1-203ENST00000551681 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
RRN3P1-203ENST00000551681 PKD1L3Q7Z443 1732 aa12.99□□□□□ -0.33
RRN3P1-203ENST00000551681 MEGF6O75095 1541 aa12.99□□□□□ -0.33
RRN3P1-203ENST00000551681 NEFMP07197 916 aa12.99□□□□□ -0.33
RRN3P1-203ENST00000551681 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
RRN3P1-203ENST00000551681 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
RRN3P1-203ENST00000551681 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
RRN3P1-203ENST00000551681 SULT6B1Q6IMI4 303 aa12.98□□□□□ -0.33
RRN3P1-203ENST00000551681 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
RRN3P1-203ENST00000551681 PRKRIP1Q9H875 184 aaPredicted RBP12.98□□□□□ -0.33
RRN3P1-203ENST00000551681 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
RRN3P1-203ENST00000551681 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
RRN3P1-203ENST00000551681 BAG6P46379 1132 aa12.96□□□□□ -0.33
RRN3P1-203ENST00000551681 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
RRN3P1-203ENST00000551681 IFNL2Q8IZJ0 200 aa12.95□□□□□ -0.34
RRN3P1-203ENST00000551681 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
RRN3P1-203ENST00000551681 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
RRN3P1-203ENST00000551681 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
RRN3P1-203ENST00000551681 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
RRN3P1-203ENST00000551681 C1orf141Q5JVX7 400 aa12.94□□□□□ -0.34
RRN3P1-203ENST00000551681 MARCH10Q8NA82 808 aaPredicted RBP12.94□□□□□ -0.34
RRN3P1-203ENST00000551681 SBF2Q86WG5 1849 aa12.94□□□□□ -0.34
RRN3P1-203ENST00000551681 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
RRN3P1-203ENST00000551681 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
RRN3P1-203ENST00000551681 FCHSD2O94868 740 aa12.93□□□□□ -0.34
RRN3P1-203ENST00000551681 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
RRN3P1-203ENST00000551681 RGPD3A6NKT7 1758 aaPredicted RBP12.92□□□□□ -0.34
RRN3P1-203ENST00000551681 RGPD4Q7Z3J3 1758 aa12.92□□□□□ -0.34
RRN3P1-203ENST00000551681 HMOX1P09601 288 aa12.92□□□□□ -0.34
RRN3P1-203ENST00000551681 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.34
RRN3P1-203ENST00000551681 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
RRN3P1-203ENST00000551681 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
RRN3P1-203ENST00000551681 TRIM37O94972 964 aa12.91□□□□□ -0.34
RRN3P1-203ENST00000551681 ZNF530Q6P9A1 599 aaPredicted RBP12.91□□□□□ -0.34
RRN3P1-203ENST00000551681 AEBP1Q8IUX7 1158 aa12.91□□□□□ -0.34
RRN3P1-203ENST00000551681 DOT1LQ8TEK3 1739 aa12.91□□□□□ -0.34
RRN3P1-203ENST00000551681 MAPK8IP3Q9UPT6 1336 aa12.9□□□□□ -0.34
RRN3P1-203ENST00000551681 PHKG2P15735 406 aa12.9□□□□□ -0.34
RRN3P1-203ENST00000551681 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
RRN3P1-203ENST00000551681 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
RRN3P1-203ENST00000551681 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
RRN3P1-203ENST00000551681 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
RRN3P1-203ENST00000551681 DEFB132Q7Z7B7 95 aa12.89□□□□□ -0.35
RRN3P1-203ENST00000551681 CYP27B1O15528 508 aa12.88□□□□□ -0.35
RRN3P1-203ENST00000551681 APBA3O96018 575 aa12.88□□□□□ -0.35
RRN3P1-203ENST00000551681 PRKAR2BP31323 418 aa12.88□□□□□ -0.35
RRN3P1-203ENST00000551681 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
RRN3P1-203ENST00000551681 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
RRN3P1-203ENST00000551681 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
RRN3P1-203ENST00000551681 PLSCR1O15162 318 aa12.87□□□□□ -0.35
RRN3P1-203ENST00000551681 BTAF1O14981 1849 aa12.86□□□□□ -0.35
RRN3P1-203ENST00000551681 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
RRN3P1-203ENST00000551681 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
RRN3P1-203ENST00000551681 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
RRN3P1-203ENST00000551681 LRP5O75197 1615 aa12.86□□□□□ -0.35
RRN3P1-203ENST00000551681 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
RRN3P1-203ENST00000551681 SCN11AQ9UI33 1791 aa12.85□□□□□ -0.35
RRN3P1-203ENST00000551681 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
RRN3P1-203ENST00000551681 ACSBG1Q96GR2 724 aa12.85□□□□□ -0.35
RRN3P1-203ENST00000551681 ITGB4P16144 1822 aa12.84□□□□□ -0.35
RRN3P1-203ENST00000551681 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
RRN3P1-203ENST00000551681 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
RRN3P1-203ENST00000551681 LMOD3Q0VAK6 560 aa12.84□□□□□ -0.35
RRN3P1-203ENST00000551681 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
RRN3P1-203ENST00000551681 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
RRN3P1-203ENST00000551681 CABP4P57796 275 aa12.83□□□□□ -0.36
RRN3P1-203ENST00000551681 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
RRN3P1-203ENST00000551681 VIRMAQ69YN4 1812 aaKnown RBP12.83□□□□□ -0.36
RRN3P1-203ENST00000551681 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
RRN3P1-203ENST00000551681 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
RRN3P1-203ENST00000551681 TEFQ10587 303 aa12.82□□□□□ -0.36
RRN3P1-203ENST00000551681 SLC27A3Q5K4L6 730 aa12.82□□□□□ -0.36
RRN3P1-203ENST00000551681 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
RRN3P1-203ENST00000551681 RREB1Q92766 1687 aa12.82□□□□□ -0.36
RRN3P1-203ENST00000551681 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
RRN3P1-203ENST00000551681 ADAMTS7Q9UKP4 1686 aa12.81□□□□□ -0.36
RRN3P1-203ENST00000551681 MRC1P22897 1456 aa12.81□□□□□ -0.36
RRN3P1-203ENST00000551681 KCNQ2O43526 872 aa12.81□□□□□ -0.36
RRN3P1-203ENST00000551681 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
RRN3P1-203ENST00000551681 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
RRN3P1-203ENST00000551681 LY75O60449 1722 aa12.8□□□□□ -0.36
RRN3P1-203ENST00000551681 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
RRN3P1-203ENST00000551681 CAMKK2Q96RR4 588 aa12.8□□□□□ -0.36
RRN3P1-203ENST00000551681 PALLDQ8WX93 1383 aa12.8□□□□□ -0.36
RRN3P1-203ENST00000551681 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
RRN3P1-203ENST00000551681 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
RRN3P1-203ENST00000551681 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
RRN3P1-203ENST00000551681 PHACTR3Q96KR7 559 aa12.79□□□□□ -0.36
RRN3P1-203ENST00000551681 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
RRN3P1-203ENST00000551681 SLC52A2Q9HAB3 445 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms