RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-223ENST00000551551 DDX54Q8TDD1 881 aaKnown RBP12.3□□□□□ -0.44
ATXN2-223ENST00000551551 HSP90AB1P08238 724 aaKnown RBP12.29□□□□□ -0.44
ATXN2-223ENST00000551551 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
ATXN2-223ENST00000551551 NBPF6Q5VWK0 638 aa12.29□□□□□ -0.44
ATXN2-223ENST00000551551 NBPF4Q96M43 638 aa12.29□□□□□ -0.44
ATXN2-223ENST00000551551 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
ATXN2-223ENST00000551551 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
ATXN2-223ENST00000551551 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
ATXN2-223ENST00000551551 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
ATXN2-223ENST00000551551 LTN1O94822 1766 aa12.28□□□□□ -0.44
ATXN2-223ENST00000551551 R3HDM1Q15032 1099 aaKnown RBP12.27□□□□□ -0.45
ATXN2-223ENST00000551551 TXNRD1Q16881 649 aa12.27□□□□□ -0.45
ATXN2-223ENST00000551551 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.45
ATXN2-223ENST00000551551 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.45
ATXN2-223ENST00000551551 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
ATXN2-223ENST00000551551 SPON1Q9HCB6 807 aa12.26□□□□□ -0.45
ATXN2-223ENST00000551551 FKBP8Q14318 412 aa12.25□□□□□ -0.45
ATXN2-223ENST00000551551 SLC16A10Q8TF71 515 aa12.25□□□□□ -0.45
ATXN2-223ENST00000551551 NPC1L1Q9UHC9 1359 aa12.25□□□□□ -0.45
ATXN2-223ENST00000551551 RGPD5Q99666 1765 aa12.25□□□□□ -0.45
ATXN2-223ENST00000551551 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
ATXN2-223ENST00000551551 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
ATXN2-223ENST00000551551 PLEKHO1Q53GL0 409 aaPredicted RBP12.24□□□□□ -0.45
ATXN2-223ENST00000551551 IFNL2Q8IZJ0 200 aa12.24□□□□□ -0.45
ATXN2-223ENST00000551551 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
ATXN2-223ENST00000551551 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
ATXN2-223ENST00000551551 RGPD3A6NKT7 1758 aaPredicted RBP12.23□□□□□ -0.45
ATXN2-223ENST00000551551 RGPD4Q7Z3J3 1758 aa12.23□□□□□ -0.45
ATXN2-223ENST00000551551 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
ATXN2-223ENST00000551551 KCNQ2O43526 872 aa12.23□□□□□ -0.45
ATXN2-223ENST00000551551 FBLN1P23142 703 aa12.23□□□□□ -0.45
ATXN2-223ENST00000551551 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
ATXN2-223ENST00000551551 SLC15A2Q16348 729 aa12.23□□□□□ -0.45
ATXN2-223ENST00000551551 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
ATXN2-223ENST00000551551 PER1O15534 1290 aaPredicted RBP12.22□□□□□ -0.45
ATXN2-223ENST00000551551 DSG3P32926 999 aa12.22□□□□□ -0.45
ATXN2-223ENST00000551551 EYA1Q99502 592 aa12.22□□□□□ -0.45
ATXN2-223ENST00000551551 KIF20BQ96Q89 1820 aa12.22□□□□□ -0.45
ATXN2-223ENST00000551551 PEAK1Q9H792 1746 aa12.22□□□□□ -0.45
ATXN2-223ENST00000551551 TNS1Q9HBL0 1735 aaKnown RBP12.21□□□□□ -0.45
ATXN2-223ENST00000551551 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.45
ATXN2-223ENST00000551551 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
ATXN2-223ENST00000551551 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
ATXN2-223ENST00000551551 PROM2Q8N271 834 aa12.21□□□□□ -0.45
ATXN2-223ENST00000551551 ACSBG1Q96GR2 724 aa12.21□□□□□ -0.45
ATXN2-223ENST00000551551 PPP1R1BQ9UD71 204 aaPredicted RBP12.21□□□□□ -0.45
ATXN2-223ENST00000551551 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
ATXN2-223ENST00000551551 EIF4A2Q14240 407 aaKnown RBP12.2□□□□□ -0.46
ATXN2-223ENST00000551551 DCAF5Q96JK2 942 aa12.2□□□□□ -0.46
ATXN2-223ENST00000551551 CFAP53Q96M91 514 aa12.2□□□□□ -0.46
ATXN2-223ENST00000551551 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
ATXN2-223ENST00000551551 WNK3Q9BYP7 1800 aa12.19□□□□□ -0.46
ATXN2-223ENST00000551551 KAT6BQ8WYB5 2073 aa12.19□□□□□ -0.46
ATXN2-223ENST00000551551 C1orf141Q5JVX7 400 aa12.19□□□□□ -0.46
ATXN2-223ENST00000551551 MTFR1LQ9H019 292 aa12.19□□□□□ -0.46
ATXN2-223ENST00000551551 MYOM1P52179 1685 aa12.19□□□□□ -0.46
ATXN2-223ENST00000551551 NCAPD2Q15021 1401 aa12.19□□□□□ -0.46
ATXN2-223ENST00000551551 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
ATXN2-223ENST00000551551 TMOD3Q9NYL9 352 aa12.18□□□□□ -0.46
ATXN2-223ENST00000551551 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
ATXN2-223ENST00000551551 DIAPH1O60610 1272 aaKnown RBP12.17□□□□□ -0.46
ATXN2-223ENST00000551551 MTHFSP49914 203 aa12.17□□□□□ -0.46
ATXN2-223ENST00000551551 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
ATXN2-223ENST00000551551 TFCP2L1Q9NZI6 479 aa12.17□□□□□ -0.46
ATXN2-223ENST00000551551 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
ATXN2-223ENST00000551551 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
ATXN2-223ENST00000551551 LRP5O75197 1615 aa12.16□□□□□ -0.46
ATXN2-223ENST00000551551 CYP27B1O15528 508 aa12.16□□□□□ -0.46
ATXN2-223ENST00000551551 ZEB1P37275 1124 aaPredicted RBP12.16□□□□□ -0.46
ATXN2-223ENST00000551551 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
ATXN2-223ENST00000551551 PNNQ9H307 717 aaKnown RBP12.16□□□□□ -0.46
ATXN2-223ENST00000551551 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
ATXN2-223ENST00000551551 PHKG2P15735 406 aa12.15□□□□□ -0.46
ATXN2-223ENST00000551551 POLD1P28340 1107 aa12.15□□□□□ -0.46
ATXN2-223ENST00000551551 MEGF6O75095 1541 aa12.15□□□□□ -0.46
ATXN2-223ENST00000551551 RREB1Q92766 1687 aa12.14□□□□□ -0.47
ATXN2-223ENST00000551551 NEFMP07197 916 aa12.14□□□□□ -0.47
ATXN2-223ENST00000551551 IL13P35225 146 aa12.14□□□□□ -0.47
ATXN2-223ENST00000551551 SULT6B1Q6IMI4 303 aa12.14□□□□□ -0.47
ATXN2-223ENST00000551551 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
ATXN2-223ENST00000551551 CABP4P57796 275 aa12.13□□□□□ -0.47
ATXN2-223ENST00000551551 AKAP4Q5JQC9 854 aa12.13□□□□□ -0.47
ATXN2-223ENST00000551551 CC2D1BQ5T0F9 858 aaKnown RBP12.13□□□□□ -0.47
ATXN2-223ENST00000551551 PTF1AQ7RTS3 328 aa12.13□□□□□ -0.47
ATXN2-223ENST00000551551 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
ATXN2-223ENST00000551551 KDRP35968 1356 aa12.13□□□□□ -0.47
ATXN2-223ENST00000551551 ZNF530Q6P9A1 599 aaPredicted RBP12.11□□□□□ -0.47
ATXN2-223ENST00000551551 GAS2L2Q8NHY3 880 aa12.11□□□□□ -0.47
ATXN2-223ENST00000551551 PIGBQ92521 554 aa12.11□□□□□ -0.47
ATXN2-223ENST00000551551 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
ATXN2-223ENST00000551551 SRCAPQ6ZRS2 3230 aa12.1□□□□□ -0.47
ATXN2-223ENST00000551551 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
ATXN2-223ENST00000551551 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
ATXN2-223ENST00000551551 SIK1P57059 783 aa12.1□□□□□ -0.47
ATXN2-223ENST00000551551 AK7Q96M32 723 aa12.1□□□□□ -0.47
ATXN2-223ENST00000551551 NUP188Q5SRE5 1749 aa12.1□□□□□ -0.47
ATXN2-223ENST00000551551 FCHSD2O94868 740 aa12.09□□□□□ -0.47
ATXN2-223ENST00000551551 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
ATXN2-223ENST00000551551 SSFA2P28290 1259 aa12.09□□□□□ -0.47
ATXN2-223ENST00000551551 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms