RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 FAM196AQ6ZSG2 479 aa20.37■□□□□ 0.85
SMARCD1-211ENST00000551497 MYBBP1AQ9BQG0 1328 aaKnown RBP20.36■□□□□ 0.85
SMARCD1-211ENST00000551497 OVOS2A0A0G2JMS6 1433 aa20.36■□□□□ 0.85
SMARCD1-211ENST00000551497 RGPD1P0DJD0 1748 aa20.35■□□□□ 0.85
SMARCD1-211ENST00000551497 TNS2Q63HR2 1409 aa20.35■□□□□ 0.85
SMARCD1-211ENST00000551497 TRIM37O94972 964 aa20.33■□□□□ 0.85
SMARCD1-211ENST00000551497 NUDCQ9Y266 331 aa20.33■□□□□ 0.85
SMARCD1-211ENST00000551497 CYP27B1O15528 508 aa20.32■□□□□ 0.84
SMARCD1-211ENST00000551497 PTF1AQ7RTS3 328 aa20.32■□□□□ 0.84
SMARCD1-211ENST00000551497 KDRP35968 1356 aa20.32■□□□□ 0.84
SMARCD1-211ENST00000551497 ANP32CO43423 234 aa20.31■□□□□ 0.84
SMARCD1-211ENST00000551497 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
SMARCD1-211ENST00000551497 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMARCD1-211ENST00000551497 SPG7Q9UQ90 795 aa20.31■□□□□ 0.84
SMARCD1-211ENST00000551497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.847e-6■■□□□ 12.8
SMARCD1-211ENST00000551497 CCDC184Q52MB2 194 aa20.29■□□□□ 0.84
SMARCD1-211ENST00000551497 PLEKHO1Q53GL0 409 aaPredicted RBP20.29■□□□□ 0.84
SMARCD1-211ENST00000551497 ACSBG1Q96GR2 724 aa20.29■□□□□ 0.84
SMARCD1-211ENST00000551497 KAT6BQ8WYB5 2073 aa20.29■□□□□ 0.84
SMARCD1-211ENST00000551497 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
SMARCD1-211ENST00000551497 KCNQ2O43526 872 aa20.28■□□□□ 0.84
SMARCD1-211ENST00000551497 CCDC125Q86Z20 511 aa20.27■□□□□ 0.84
SMARCD1-211ENST00000551497 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
SMARCD1-211ENST00000551497 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.83
SMARCD1-211ENST00000551497 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.83
SMARCD1-211ENST00000551497 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
SMARCD1-211ENST00000551497 PHKG2P15735 406 aa20.25■□□□□ 0.83
SMARCD1-211ENST00000551497 PRKAR2BP31323 418 aa20.25■□□□□ 0.83
SMARCD1-211ENST00000551497 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
SMARCD1-211ENST00000551497 DEFB132Q7Z7B7 95 aa20.25■□□□□ 0.83
SMARCD1-211ENST00000551497 PHACTR3Q96KR7 559 aa20.25■□□□□ 0.83
SMARCD1-211ENST00000551497 BCL9O00512 1426 aa20.25■□□□□ 0.83
SMARCD1-211ENST00000551497 PKD1L3Q7Z443 1732 aa20.24■□□□□ 0.83
SMARCD1-211ENST00000551497 EP400Q96L91 3159 aa20.24■□□□□ 0.83
SMARCD1-211ENST00000551497 FCHSD2O94868 740 aa20.24■□□□□ 0.83
SMARCD1-211ENST00000551497 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
SMARCD1-211ENST00000551497 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
SMARCD1-211ENST00000551497 MTHFSDQ2M296 383 aaKnown RBP20.24■□□□□ 0.83
SMARCD1-211ENST00000551497 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
SMARCD1-211ENST00000551497 SBF2Q86WG5 1849 aa20.24■□□□□ 0.83
SMARCD1-211ENST00000551497 APBA3O96018 575 aa20.23■□□□□ 0.83
SMARCD1-211ENST00000551497 NKX1-1Q15270 411 aaPredicted RBP20.23■□□□□ 0.83
SMARCD1-211ENST00000551497 BCL11BQ9C0K0 894 aaPredicted RBP20.23■□□□□ 0.83
SMARCD1-211ENST00000551497 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
SMARCD1-211ENST00000551497 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
SMARCD1-211ENST00000551497 PLEKHG2Q9H7P9 1386 aa20.2■□□□□ 0.82
SMARCD1-211ENST00000551497 C1orf141Q5JVX7 400 aa20.19■□□□□ 0.82
SMARCD1-211ENST00000551497 MPRIPQ6WCQ1 1025 aa20.19■□□□□ 0.82
SMARCD1-211ENST00000551497 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
SMARCD1-211ENST00000551497 PLEKHF1Q96S99 279 aa20.18■□□□□ 0.82
SMARCD1-211ENST00000551497 BAG6P46379 1132 aa20.17■□□□□ 0.82
SMARCD1-211ENST00000551497 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMARCD1-211ENST00000551497 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
SMARCD1-211ENST00000551497 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
SMARCD1-211ENST00000551497 EZH2Q15910 746 aaKnown RBP20.16■□□□□ 0.82
SMARCD1-211ENST00000551497 DIEXFQ68CQ4 756 aaKnown RBP20.16■□□□□ 0.82
SMARCD1-211ENST00000551497 DCAF5Q96JK2 942 aa20.16■□□□□ 0.82
SMARCD1-211ENST00000551497 MRS2Q9HD23 443 aa20.16■□□□□ 0.82
SMARCD1-211ENST00000551497 TNS1Q9HBL0 1735 aaKnown RBP20.16■□□□□ 0.82
SMARCD1-211ENST00000551497 HSP90AB1P08238 724 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-211ENST00000551497 CAMKK2Q96RR4 588 aa20.15■□□□□ 0.82
SMARCD1-211ENST00000551497 DOT1LQ8TEK3 1739 aa20.14■□□□□ 0.81
SMARCD1-211ENST00000551497 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.81
SMARCD1-211ENST00000551497 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
SMARCD1-211ENST00000551497 PIGBQ92521 554 aa20.14■□□□□ 0.81
SMARCD1-211ENST00000551497 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
SMARCD1-211ENST00000551497 KDM6AO15550 1401 aaPredicted RBP20.13■□□□□ 0.81
SMARCD1-211ENST00000551497 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
SMARCD1-211ENST00000551497 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
SMARCD1-211ENST00000551497 PLSCR1O15162 318 aa20.12■□□□□ 0.81
SMARCD1-211ENST00000551497 RNMTO43148 476 aaKnown RBP20.12■□□□□ 0.81
SMARCD1-211ENST00000551497 PROM2Q8N271 834 aa20.12■□□□□ 0.81
SMARCD1-211ENST00000551497 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
SMARCD1-211ENST00000551497 TOGARAM1Q9Y4F4 1720 aa20.12■□□□□ 0.81
SMARCD1-211ENST00000551497 ERVV-2B6SEH9 535 aa20.11■□□□□ 0.81
SMARCD1-211ENST00000551497 CABP4P57796 275 aa20.11■□□□□ 0.81
SMARCD1-211ENST00000551497 NFATC2IPQ8NCF5 419 aa20.11■□□□□ 0.81
SMARCD1-211ENST00000551497 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
SMARCD1-211ENST00000551497 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
SMARCD1-211ENST00000551497 BTAF1O14981 1849 aa20.11■□□□□ 0.81
SMARCD1-211ENST00000551497 ITGB4P16144 1822 aa20.11■□□□□ 0.81
SMARCD1-211ENST00000551497 NEFMP07197 916 aa20.1■□□□□ 0.81
SMARCD1-211ENST00000551497 MAP3K5Q99683 1374 aa20.08■□□□□ 0.81
SMARCD1-211ENST00000551497 MAPK8IP3Q9UPT6 1336 aa20.08■□□□□ 0.81
SMARCD1-211ENST00000551497 NFE2L2Q16236 605 aa20.08■□□□□ 0.81
SMARCD1-211ENST00000551497 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
SMARCD1-211ENST00000551497 RUNDC1Q96C34 613 aa20.08■□□□□ 0.81
SMARCD1-211ENST00000551497 ASAP1Q9ULH1 1129 aa20.08■□□□□ 0.81
SMARCD1-211ENST00000551497 KCNQ4P56696 695 aa20.07■□□□□ 0.8
SMARCD1-211ENST00000551497 DCTN1Q14203 1278 aa20.07■□□□□ 0.8
SMARCD1-211ENST00000551497 MIER1Q8N108 512 aa20.07■□□□□ 0.8
SMARCD1-211ENST00000551497 ATG3Q9NT62 314 aa20.07■□□□□ 0.8
SMARCD1-211ENST00000551497 MCM10Q7L590 875 aa20.06■□□□□ 0.8
SMARCD1-211ENST00000551497 SLC52A2Q9HAB3 445 aa20.06■□□□□ 0.8
SMARCD1-211ENST00000551497 RRP7AQ9Y3A4 280 aaKnown RBP20.06■□□□□ 0.8
SMARCD1-211ENST00000551497 SCN11AQ9UI33 1791 aa20.06■□□□□ 0.8
SMARCD1-211ENST00000551497 TMPOP42166 694 aaKnown RBP20.05■□□□□ 0.8
SMARCD1-211ENST00000551497 RIPK4P57078 832 aa20.04■□□□□ 0.8
SMARCD1-211ENST00000551497 NEUROD2Q15784 382 aa20.04■□□□□ 0.8
SMARCD1-211ENST00000551497 LRRC4BQ9NT99 713 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms