RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 XIRP1Q702N8 1843 aaKnown RBP26.44■■□□□ 1.82
NPAS3-210ENST00000551492 COL3A1P02461 1466 aaPredicted RBP26.44■■□□□ 1.82
NPAS3-210ENST00000551492 EYA1Q99502 592 aa26.43■■□□□ 1.82
NPAS3-210ENST00000551492 ZBTB22O15209 634 aa26.43■■□□□ 1.82
NPAS3-210ENST00000551492 HOXC9P31274 260 aa26.43■■□□□ 1.82
NPAS3-210ENST00000551492 BCL2L13Q9BXK5 485 aa26.43■■□□□ 1.82
NPAS3-210ENST00000551492 TMPOP42166 694 aaKnown RBP26.43■■□□□ 1.82
NPAS3-210ENST00000551492 GOLGA2Q08379 1002 aa26.43■■□□□ 1.82
NPAS3-210ENST00000551492 DMTNQ08495 405 aa26.43■■□□□ 1.82
NPAS3-210ENST00000551492 NRKQ7Z2Y5 1582 aa26.42■■□□□ 1.82
NPAS3-210ENST00000551492 PNPLA6Q8IY17 1366 aa26.41■■□□□ 1.82
NPAS3-210ENST00000551492 FSD2A1L4K1 749 aa26.4■■□□□ 1.82
NPAS3-210ENST00000551492 BRD2P25440 801 aaKnown RBP26.4■■□□□ 1.82
NPAS3-210ENST00000551492 ANKRD26Q9UPS8 1709 aa26.39■■□□□ 1.82
NPAS3-210ENST00000551492 PEAK1Q9H792 1746 aa26.39■■□□□ 1.82
NPAS3-210ENST00000551492 ELL2O00472 640 aaPredicted RBP26.39■■□□□ 1.82
NPAS3-210ENST00000551492 DUSP27Q5VZP5 1158 aa26.38■■□□□ 1.81
NPAS3-210ENST00000551492 TRIM35Q9UPQ4 493 aa26.38■■□□□ 1.81
NPAS3-210ENST00000551492 SLKQ9H2G2 1235 aaPredicted RBP26.38■■□□□ 1.81
NPAS3-210ENST00000551492 MIS18AQ9NYP9 233 aa26.38■■□□□ 1.81
NPAS3-210ENST00000551492 HAP1P54257 671 aaPredicted RBP26.37■■□□□ 1.81
NPAS3-210ENST00000551492 NBPF6Q5VWK0 638 aa26.36■■□□□ 1.81
NPAS3-210ENST00000551492 MCM10Q7L590 875 aa26.36■■□□□ 1.81
NPAS3-210ENST00000551492 NBPF4Q96M43 638 aa26.36■■□□□ 1.81
NPAS3-210ENST00000551492 NCLP19338 710 aaKnown RBP26.36■■□□□ 1.81
NPAS3-210ENST00000551492 ZSCAN20P17040 1043 aaPredicted RBP26.35■■□□□ 1.81
NPAS3-210ENST00000551492 AATKQ6ZMQ8 1374 aa26.35■■□□□ 1.81
NPAS3-210ENST00000551492 USP31Q70CQ4 1352 aa26.35■■□□□ 1.81
NPAS3-210ENST00000551492 ZNF521Q96K83 1311 aa26.35■■□□□ 1.81
NPAS3-210ENST00000551492 MYH16Q9H6N6 1097 aa26.34■■□□□ 1.81
NPAS3-210ENST00000551492 RCAN3Q9UKA8 241 aa26.34■■□□□ 1.81
NPAS3-210ENST00000551492 NPHP3Q7Z494 1330 aa26.34■■□□□ 1.81
NPAS3-210ENST00000551492 BCAR3O75815 825 aa26.34■■□□□ 1.81
NPAS3-210ENST00000551492 SLFN5Q08AF3 891 aa26.34■■□□□ 1.81
NPAS3-210ENST00000551492 UTP14CQ5TAP6 766 aaKnown RBP26.34■■□□□ 1.81
NPAS3-210ENST00000551492 FCHSD2O94868 740 aa26.33■■□□□ 1.8
NPAS3-210ENST00000551492 C20orf194Q5TEA3 1177 aa26.31■■□□□ 1.8
NPAS3-210ENST00000551492 MAP7D2Q96T17 732 aa26.3■■□□□ 1.8
NPAS3-210ENST00000551492 FLT4P35916 1363 aa26.29■■□□□ 1.8
NPAS3-210ENST00000551492 E9PSI1 815 aa26.29■■□□□ 1.8
NPAS3-210ENST00000551492 TRIM44Q96DX7 344 aaPredicted RBP26.29■■□□□ 1.8
NPAS3-210ENST00000551492 MTHFSDQ2M296 383 aaKnown RBP26.28■■□□□ 1.8
NPAS3-210ENST00000551492 KRT24Q2M2I5 525 aa26.28■■□□□ 1.8
NPAS3-210ENST00000551492 ARHGEF25Q86VW2 580 aa26.28■■□□□ 1.8
NPAS3-210ENST00000551492 SBNO1A3KN83 1393 aa26.27■■□□□ 1.8
NPAS3-210ENST00000551492 CDK12Q9NYV4 1490 aaPredicted RBP26.26■■□□□ 1.79
NPAS3-210ENST00000551492 CSB-PGBD3P0DP91 1061 aa26.26■■□□□ 1.79
NPAS3-210ENST00000551492 ANKRD24Q8TF21 1146 aa26.26■■□□□ 1.79
NPAS3-210ENST00000551492 NLRP2Q9NX02 1062 aa26.26■■□□□ 1.79
NPAS3-210ENST00000551492 SPATA31A3Q5VYP0 1347 aa26.26■■□□□ 1.79
NPAS3-210ENST00000551492 MARF1Q9Y4F3 1742 aaKnown RBP26.26■■□□□ 1.79
NPAS3-210ENST00000551492 STRN4Q9NRL3 753 aa26.26■■□□□ 1.79
NPAS3-210ENST00000551492 TNNQ9UQP3 1299 aa26.26■■□□□ 1.79
NPAS3-210ENST00000551492 TEX2Q8IWB9 1127 aa26.25■■□□□ 1.79
NPAS3-210ENST00000551492 IP6K1Q92551 441 aa26.25■■□□□ 1.79
NPAS3-210ENST00000551492 NUTM2BA6NNL0 878 aaPredicted RBP26.25■■□□□ 1.79
NPAS3-210ENST00000551492 NUTM2EB1AL46 878 aaPredicted RBP26.25■■□□□ 1.79
NPAS3-210ENST00000551492 RRP1P56182 461 aaKnown RBP26.25■■□□□ 1.79
NPAS3-210ENST00000551492 NUTM2AQ8IVF1 878 aaPredicted RBP26.25■■□□□ 1.79
NPAS3-210ENST00000551492 KIAA0232Q92628 1395 aa26.24■■□□□ 1.79
NPAS3-210ENST00000551492 R3HCC1Q9Y3T6 440 aaKnown RBP26.24■■□□□ 1.79
NPAS3-210ENST00000551492 ADAMTS2O95450 1211 aa26.23■■□□□ 1.79
NPAS3-210ENST00000551492 NFE2L2Q16236 605 aa26.23■■□□□ 1.79
NPAS3-210ENST00000551492 EXOSC9Q06265 439 aaKnown RBP26.22■■□□□ 1.79
NPAS3-210ENST00000551492 KCNH5Q8NCM2 988 aa26.22■■□□□ 1.79
NPAS3-210ENST00000551492 UBAP1LF5GYI3 381 aa26.22■■□□□ 1.79
NPAS3-210ENST00000551492 PRDM11Q9NQV5 511 aa26.21■■□□□ 1.79
NPAS3-210ENST00000551492 MRE11P49959 708 aa26.2■■□□□ 1.79
NPAS3-210ENST00000551492 CERS3Q8IU89 383 aa26.2■■□□□ 1.79
NPAS3-210ENST00000551492 PDE3BQ13370 1112 aa26.2■■□□□ 1.78
NPAS3-210ENST00000551492 C8orf34Q49A92 452 aa26.19■■□□□ 1.78
NPAS3-210ENST00000551492 GRPEL1Q9HAV7 217 aa26.19■■□□□ 1.78
NPAS3-210ENST00000551492 CLUAP1Q96AJ1 413 aa26.19■■□□□ 1.78
NPAS3-210ENST00000551492 INSRP06213 1382 aa26.19■■□□□ 1.78
NPAS3-210ENST00000551492 IQSEC2Q5JU85 1478 aa26.19■■□□□ 1.78
NPAS3-210ENST00000551492 MED1Q15648 1581 aaPredicted RBP26.18■■□□□ 1.78
NPAS3-210ENST00000551492 TSPYL6Q8N831 410 aa26.18■■□□□ 1.78
NPAS3-210ENST00000551492 LTN1O94822 1766 aa26.18■■□□□ 1.78
NPAS3-210ENST00000551492 RGPD2P0DJD1 1756 aa26.18■■□□□ 1.78
NPAS3-210ENST00000551492 OFD1O75665 1012 aa26.17■■□□□ 1.78
NPAS3-210ENST00000551492 SAMD1Q6SPF0 538 aaPredicted RBP26.17■■□□□ 1.78
NPAS3-210ENST00000551492 CHRM1P11229 460 aaPredicted RBP26.16■■□□□ 1.78
NPAS3-210ENST00000551492 PXDNQ92626 1479 aa26.16■■□□□ 1.78
NPAS3-210ENST00000551492 RGPD5Q99666 1765 aa26.16■■□□□ 1.78
NPAS3-210ENST00000551492 PHF23Q9BUL5 403 aaPredicted RBP26.15■■□□□ 1.78
NPAS3-210ENST00000551492 NECTIN2Q92692 538 aa26.15■■□□□ 1.78
NPAS3-210ENST00000551492 SOS2Q07890 1332 aaPredicted RBP26.15■■□□□ 1.78
NPAS3-210ENST00000551492 DCCP43146 1447 aa26.15■■□□□ 1.78
NPAS3-210ENST00000551492 TNS3Q68CZ2 1445 aa26.14■■□□□ 1.78
NPAS3-210ENST00000551492 NFAT5O94916 1531 aa26.14■■□□□ 1.78
NPAS3-210ENST00000551492 IGSF1Q8N6C5 1336 aa26.14■■□□□ 1.78
NPAS3-210ENST00000551492 TRPM3Q9HCF6 1732 aaPredicted RBP26.14■■□□□ 1.77
NPAS3-210ENST00000551492 UQCRHLA0A096LP55 91 aa26.14■■□□□ 1.77
NPAS3-210ENST00000551492 UQCRHP07919 91 aa26.14■■□□□ 1.77
NPAS3-210ENST00000551492 MPRIPQ6WCQ1 1025 aa26.14■■□□□ 1.77
NPAS3-210ENST00000551492 LGR6Q9HBX8 967 aa26.14■■□□□ 1.77
NPAS3-210ENST00000551492 TRMT2AQ8IZ69 625 aaKnown RBP26.13■■□□□ 1.77
NPAS3-210ENST00000551492 USP19O94966 1318 aa26.13■■□□□ 1.77
NPAS3-210ENST00000551492 CDK11BP21127 795 aaKnown RBP26.13■■□□□ 1.77
NPAS3-210ENST00000551492 DNTTIP2Q5QJE6 756 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms