RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 USHBP1Q8N6Y0 703 aa27.95■■■□□ 2.06
SLC48A1-208ENST00000551301 SYTL4Q96C24 671 aaPredicted RBP27.95■■■□□ 2.06
SLC48A1-208ENST00000551301 RGPD2P0DJD1 1756 aa27.95■■■□□ 2.06
SLC48A1-208ENST00000551301 ANO8Q9HCE9 1232 aaPredicted RBP27.94■■■□□ 2.06
SLC48A1-208ENST00000551301 EMILIN1Q9Y6C2 1016 aa27.93■■■□□ 2.06
SLC48A1-208ENST00000551301 MEGF6O75095 1541 aa27.92■■■□□ 2.06
SLC48A1-208ENST00000551301 BTAF1O14981 1849 aa27.92■■■□□ 2.06
SLC48A1-208ENST00000551301 SLC15A2Q16348 729 aa27.91■■■□□ 2.06
SLC48A1-208ENST00000551301 PRIM1P49642 420 aaKnown RBP27.89■■■□□ 2.06
SLC48A1-208ENST00000551301 PANK3Q9H999 370 aa27.89■■■□□ 2.06
SLC48A1-208ENST00000551301 SLC27A3Q5K4L6 730 aa27.88■■■□□ 2.05
SLC48A1-208ENST00000551301 WASHC2AQ641Q2 1341 aa27.88■■■□□ 2.05
SLC48A1-208ENST00000551301 PCDH11XQ9BZA7 1347 aa27.88■■■□□ 2.05
SLC48A1-208ENST00000551301 PCDH11YQ9BZA8 1340 aa27.88■■■□□ 2.05
SLC48A1-208ENST00000551301 TNNT2P45379 298 aaPredicted RBP27.86■■■□□ 2.05
SLC48A1-208ENST00000551301 MAP2P11137 1827 aaKnown RBP27.85■■■□□ 2.05
SLC48A1-208ENST00000551301 POLKQ9UBT6 870 aa27.84■■■□□ 2.05
SLC48A1-208ENST00000551301 NSD2O96028 1365 aa27.84■■■□□ 2.05
SLC48A1-208ENST00000551301 DOT1LQ8TEK3 1739 aa27.83■■■□□ 2.05
SLC48A1-208ENST00000551301 ANKRD26Q9UPS8 1709 aa27.82■■■□□ 2.04
SLC48A1-208ENST00000551301 DCAF8L1A6NGE4 600 aa27.82■■■□□ 2.04
SLC48A1-208ENST00000551301 ZBTB7AO95365 584 aa27.82■■■□□ 2.04
SLC48A1-208ENST00000551301 KNSTRNQ9Y448 316 aa27.82■■■□□ 2.04
SLC48A1-208ENST00000551301 HMGB2P26583 209 aaKnown RBP27.81■■■□□ 2.04
SLC48A1-208ENST00000551301 SPG7Q9UQ90 795 aa27.81■■■□□ 2.04
SLC48A1-208ENST00000551301 SHANK3Q9BYB0 1731 aa27.81■■■□□ 2.04
SLC48A1-208ENST00000551301 CASZ1Q86V15 1759 aa27.81■■■□□ 2.04
SLC48A1-208ENST00000551301 MORC1Q86VD1 984 aa27.79■■■□□ 2.04
SLC48A1-208ENST00000551301 PDGFDQ9GZP0 370 aaPredicted RBP27.78■■■□□ 2.04
SLC48A1-208ENST00000551301 MTFR1LQ9H019 292 aa27.78■■■□□ 2.04
SLC48A1-208ENST00000551301 LRRC4BQ9NT99 713 aa27.78■■■□□ 2.04
SLC48A1-208ENST00000551301 EYA1Q99502 592 aa27.77■■■□□ 2.04
SLC48A1-208ENST00000551301 ATF5Q9Y2D1 282 aaPredicted RBP27.77■■■□□ 2.04
SLC48A1-208ENST00000551301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.75■■■□□ 2.03
SLC48A1-208ENST00000551301 CCNL1Q9UK58 526 aaPredicted RBP27.75■■■□□ 2.03
SLC48A1-208ENST00000551301 NCAPD2Q15021 1401 aa27.75■■■□□ 2.03
SLC48A1-208ENST00000551301 PAPPAQ13219 1627 aa27.74■■■□□ 2.03
SLC48A1-208ENST00000551301 TFCP2L1Q9NZI6 479 aa27.74■■■□□ 2.03
SLC48A1-208ENST00000551301 CYP27B1O15528 508 aa27.73■■■□□ 2.03
SLC48A1-208ENST00000551301 EIF4A2Q14240 407 aaKnown RBP27.73■■■□□ 2.03
SLC48A1-208ENST00000551301 ZNF827Q17R98 1081 aa27.72■■■□□ 2.03
SLC48A1-208ENST00000551301 MPRIPQ6WCQ1 1025 aa27.72■■■□□ 2.03
SLC48A1-208ENST00000551301 AKT1S1Q96B36 256 aa27.72■■■□□ 2.03
SLC48A1-208ENST00000551301 PKD1L3Q7Z443 1732 aa27.7■■■□□ 2.03
SLC48A1-208ENST00000551301 SLC16A10Q8TF71 515 aa27.7■■■□□ 2.02
SLC48A1-208ENST00000551301 SMARCC1Q92922 1105 aaPredicted RBP27.7■■■□□ 2.02
SLC48A1-208ENST00000551301 KIF7Q2M1P5 1343 aa27.69■■■□□ 2.02
SLC48A1-208ENST00000551301 PTGER2P43116 358 aa27.69■■■□□ 2.02
SLC48A1-208ENST00000551301 LY75O60449 1722 aa27.69■■■□□ 2.02
SLC48A1-208ENST00000551301 KCNQ4P56696 695 aa27.68■■■□□ 2.02
SLC48A1-208ENST00000551301 IFNL2Q8IZJ0 200 aa27.68■■■□□ 2.02
SLC48A1-208ENST00000551301 NKX1-1Q15270 411 aaPredicted RBP27.67■■■□□ 2.02
SLC48A1-208ENST00000551301 PLEKHG2Q9H7P9 1386 aa27.67■■■□□ 2.02
SLC48A1-208ENST00000551301 PALLDQ8WX93 1383 aa27.65■■■□□ 2.02
SLC48A1-208ENST00000551301 POLD1P28340 1107 aa27.64■■■□□ 2.02
SLC48A1-208ENST00000551301 IGSF1Q8N6C5 1336 aa27.64■■■□□ 2.01
SLC48A1-208ENST00000551301 ARXQ96QS3 562 aa27.63■■■□□ 2.01
SLC48A1-208ENST00000551301 TMOD3Q9NYL9 352 aa27.63■■■□□ 2.01
SLC48A1-208ENST00000551301 QSER1Q2KHR3 1735 aa27.63■■■□□ 2.01
SLC48A1-208ENST00000551301 MSH5O43196 834 aa27.62■■■□□ 2.01
SLC48A1-208ENST00000551301 PHKG2P15735 406 aa27.62■■■□□ 2.01
SLC48A1-208ENST00000551301 PLEKHO1Q53GL0 409 aaPredicted RBP27.62■■■□□ 2.01
SLC48A1-208ENST00000551301 PNPLA7Q6ZV29 1317 aa27.62■■■□□ 2.01
SLC48A1-208ENST00000551301 HSP90AB1P08238 724 aaKnown RBP27.6■■■□□ 2.01
SLC48A1-208ENST00000551301 AMOTQ4VCS5 1084 aa27.6■■■□□ 2.01
SLC48A1-208ENST00000551301 AMER1Q5JTC6 1135 aaPredicted RBP27.6■■■□□ 2.01
SLC48A1-208ENST00000551301 PIGBQ92521 554 aa27.6■■■□□ 2.01
SLC48A1-208ENST00000551301 SGIP1Q9BQI5 828 aa27.6■■■□□ 2.01
SLC48A1-208ENST00000551301 FHDC1Q9C0D6 1143 aaPredicted RBP27.6■■■□□ 2.01
SLC48A1-208ENST00000551301 ITGB4P16144 1822 aa27.6■■■□□ 2.01
SLC48A1-208ENST00000551301 FLAD1Q8NFF5 587 aa27.58■■■□□ 2.01
SLC48A1-208ENST00000551301 SYT17Q9BSW7 474 aa27.57■■■□□ 2
SLC48A1-208ENST00000551301 TOGARAM1Q9Y4F4 1720 aa27.57■■■□□ 2
SLC48A1-208ENST00000551301 C5P01031 1676 aa27.55■■■□□ 2
SLC48A1-208ENST00000551301 C1orf141Q5JVX7 400 aa27.54■■■□□ 2
SLC48A1-208ENST00000551301 ZNF530Q6P9A1 599 aaPredicted RBP27.54■■■□□ 2
SLC48A1-208ENST00000551301 DCAF5Q96JK2 942 aa27.54■■■□□ 2
SLC48A1-208ENST00000551301 AK7Q96M32 723 aa27.54■■■□□ 2
SLC48A1-208ENST00000551301 ERVV-2B6SEH9 535 aa27.53■■■□□ 2
SLC48A1-208ENST00000551301 SULT6B1Q6IMI4 303 aa27.53■■■□□ 2
SLC48A1-208ENST00000551301 LOC102724428A0A0B4J2F2 783 aa27.52■■■□□ 2
SLC48A1-208ENST00000551301 SIK1P57059 783 aa27.52■■■□□ 2
SLC48A1-208ENST00000551301 CC2D1BQ5T0F9 858 aaKnown RBP27.52■■■□□ 2
SLC48A1-208ENST00000551301 TUBGCP6Q96RT7 1819 aa27.52■■■□□ 2
SLC48A1-208ENST00000551301 PER1O15534 1290 aaPredicted RBP27.51■■□□□ 1.99
SLC48A1-208ENST00000551301 MTHFSP49914 203 aa27.51■■□□□ 1.99
SLC48A1-208ENST00000551301 COL23A1Q86Y22 540 aaPredicted RBP27.51■■□□□ 1.99
SLC48A1-208ENST00000551301 KLHL34Q8N239 644 aa27.51■■□□□ 1.99
SLC48A1-208ENST00000551301 MAP3K5Q99683 1374 aa27.5■■□□□ 1.99
SLC48A1-208ENST00000551301 YY1P25490 414 aa27.5■■□□□ 1.99
SLC48A1-208ENST00000551301 IL13P35225 146 aa27.5■■□□□ 1.99
SLC48A1-208ENST00000551301 AEBP1Q8IUX7 1158 aa27.49■■□□□ 1.99
SLC48A1-208ENST00000551301 ASAP1Q9ULH1 1129 aa27.49■■□□□ 1.99
SLC48A1-208ENST00000551301 TAF1LQ8IZX4 1826 aa27.48■■□□□ 1.99
SLC48A1-208ENST00000551301 ATP6V1AP38606 617 aa27.47■■□□□ 1.99
SLC48A1-208ENST00000551301 CABP4P57796 275 aa27.47■■□□□ 1.99
SLC48A1-208ENST00000551301 KDRP35968 1356 aa27.46■■□□□ 1.99
SLC48A1-208ENST00000551301 C4BP0C0L5 1744 aa27.45■■□□□ 1.99
SLC48A1-208ENST00000551301 ATG3Q9NT62 314 aa27.45■■□□□ 1.98
SLC48A1-208ENST00000551301 NPC1L1Q9UHC9 1359 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms