RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 CFAP44Q96MT7 982 aa18.45■□□□□ 0.54
LETMD1-229ENST00000551261 BABAM1Q9NWV8 329 aa18.45■□□□□ 0.54
LETMD1-229ENST00000551261 FANCIQ9NVI1 1328 aa18.45■□□□□ 0.54
LETMD1-229ENST00000551261 JCADQ9P266 1359 aa18.44■□□□□ 0.54
LETMD1-229ENST00000551261 PKD1L3Q7Z443 1732 aa18.44■□□□□ 0.54
LETMD1-229ENST00000551261 SPINK5Q9NQ38 1064 aaPredicted RBP18.44■□□□□ 0.54
LETMD1-229ENST00000551261 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
LETMD1-229ENST00000551261 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
LETMD1-229ENST00000551261 NLRP2Q9NX02 1062 aa18.43■□□□□ 0.54
LETMD1-229ENST00000551261 NWD2Q9ULI1 1742 aa18.43■□□□□ 0.54
LETMD1-229ENST00000551261 CRB1P82279 1406 aa18.42■□□□□ 0.54
LETMD1-229ENST00000551261 PLCH1Q4KWH8 1693 aa18.42■□□□□ 0.54
LETMD1-229ENST00000551261 ZNF853P0CG23 659 aa18.42■□□□□ 0.54
LETMD1-229ENST00000551261 TATP17735 454 aaPredicted RBP18.42■□□□□ 0.54
LETMD1-229ENST00000551261 CHRNA2Q15822 529 aa18.42■□□□□ 0.54
LETMD1-229ENST00000551261 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
LETMD1-229ENST00000551261 ADAMTS7Q9UKP4 1686 aa18.41■□□□□ 0.54
LETMD1-229ENST00000551261 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
LETMD1-229ENST00000551261 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
LETMD1-229ENST00000551261 CARD10Q9BWT7 1032 aa18.41■□□□□ 0.54
LETMD1-229ENST00000551261 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
LETMD1-229ENST00000551261 SPG7Q9UQ90 795 aa18.4■□□□□ 0.54
LETMD1-229ENST00000551261 SOS1Q07889 1333 aaPredicted RBP18.4■□□□□ 0.54
LETMD1-229ENST00000551261 CEMIPQ8WUJ3 1361 aa18.4■□□□□ 0.54
LETMD1-229ENST00000551261 SPATA31A6Q5VVP1 1343 aa18.39■□□□□ 0.53
LETMD1-229ENST00000551261 TOM1L2Q6ZVM7 507 aa18.38■□□□□ 0.53
LETMD1-229ENST00000551261 MEGF6O75095 1541 aa18.38■□□□□ 0.53
LETMD1-229ENST00000551261 FAM83GA6ND36 823 aa18.37■□□□□ 0.53
LETMD1-229ENST00000551261 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
LETMD1-229ENST00000551261 ZNF530Q6P9A1 599 aaPredicted RBP18.37■□□□□ 0.53
LETMD1-229ENST00000551261 CHL1O00533 1208 aa18.36■□□□□ 0.53
LETMD1-229ENST00000551261 EVA1CP58658 441 aa18.36■□□□□ 0.53
LETMD1-229ENST00000551261 NRAPQ86VF7 1730 aa18.36■□□□□ 0.53
LETMD1-229ENST00000551261 FKBP8Q14318 412 aa18.35■□□□□ 0.53
LETMD1-229ENST00000551261 ALDH1L2Q3SY69 923 aa18.35■□□□□ 0.53
LETMD1-229ENST00000551261 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
LETMD1-229ENST00000551261 PCDH11XQ9BZA7 1347 aa18.34■□□□□ 0.53
LETMD1-229ENST00000551261 PCDH11YQ9BZA8 1340 aa18.34■□□□□ 0.53
LETMD1-229ENST00000551261 MCM10Q7L590 875 aa18.34■□□□□ 0.53
LETMD1-229ENST00000551261 TSR2Q969E8 191 aaKnown RBP18.34■□□□□ 0.53
LETMD1-229ENST00000551261 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
LETMD1-229ENST00000551261 BTG4Q9NY30 223 aa18.34■□□□□ 0.53
LETMD1-229ENST00000551261 MRC1P22897 1456 aa18.33■□□□□ 0.53
LETMD1-229ENST00000551261 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.53
LETMD1-229ENST00000551261 KIF16BQ96L93 1317 aa18.33■□□□□ 0.53
LETMD1-229ENST00000551261 RARSP54136 660 aaKnown RBP18.33■□□□□ 0.52
LETMD1-229ENST00000551261 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.52
LETMD1-229ENST00000551261 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
LETMD1-229ENST00000551261 SLIT2O94813 1529 aa18.33■□□□□ 0.52
LETMD1-229ENST00000551261 MS4A1P11836 297 aa18.32■□□□□ 0.52
LETMD1-229ENST00000551261 IL2RBP14784 551 aa18.32■□□□□ 0.52
LETMD1-229ENST00000551261 IFNL2Q8IZJ0 200 aa18.32■□□□□ 0.52
LETMD1-229ENST00000551261 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
LETMD1-229ENST00000551261 THRAP3Q9Y2W1 955 aaKnown RBP18.32■□□□□ 0.52
LETMD1-229ENST00000551261 LAS1LQ9Y4W2 734 aaKnown RBP18.32■□□□□ 0.52
LETMD1-229ENST00000551261 BRPF1P55201 1214 aaPredicted RBP18.31■□□□□ 0.52
LETMD1-229ENST00000551261 DCTN1Q14203 1278 aa18.31■□□□□ 0.52
LETMD1-229ENST00000551261 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
LETMD1-229ENST00000551261 SCN11AQ9UI33 1791 aa18.31■□□□□ 0.52
LETMD1-229ENST00000551261 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.31■□□□□ 0.52
LETMD1-229ENST00000551261 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
LETMD1-229ENST00000551261 TEFQ10587 303 aa18.3■□□□□ 0.52
LETMD1-229ENST00000551261 STRN4Q9NRL3 753 aa18.3■□□□□ 0.52
LETMD1-229ENST00000551261 TSPYL4Q9UJ04 414 aa18.3■□□□□ 0.52
LETMD1-229ENST00000551261 DISP2A7MBM2 1401 aa18.3■□□□□ 0.52
LETMD1-229ENST00000551261 VIRMAQ69YN4 1812 aaKnown RBP18.3■□□□□ 0.52
LETMD1-229ENST00000551261 SIPA1L3O60292 1781 aaPredicted RBP18.3■□□□□ 0.52
LETMD1-229ENST00000551261 PHKG2P15735 406 aa18.29■□□□□ 0.52
LETMD1-229ENST00000551261 PDE3AQ14432 1141 aa18.29■□□□□ 0.52
LETMD1-229ENST00000551261 LARP1Q6PKG0 1096 aaKnown RBP18.29■□□□□ 0.52
LETMD1-229ENST00000551261 IL17REQ8NFR9 667 aa18.29■□□□□ 0.52
LETMD1-229ENST00000551261 DCAF5Q96JK2 942 aa18.29■□□□□ 0.52
LETMD1-229ENST00000551261 TWISTNBQ3B726 338 aaPredicted RBP18.28■□□□□ 0.52
LETMD1-229ENST00000551261 RNMTO43148 476 aaKnown RBP18.27■□□□□ 0.52
LETMD1-229ENST00000551261 HOXB7P09629 217 aa18.27■□□□□ 0.52
LETMD1-229ENST00000551261 CANXP27824 592 aaKnown RBP18.27■□□□□ 0.52
LETMD1-229ENST00000551261 AAMPQ13685 434 aa18.27■□□□□ 0.52
LETMD1-229ENST00000551261 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
LETMD1-229ENST00000551261 LRP6O75581 1613 aa18.27■□□□□ 0.51
LETMD1-229ENST00000551261 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
LETMD1-229ENST00000551261 SMC4Q9NTJ3 1288 aa18.26■□□□□ 0.51
LETMD1-229ENST00000551261 SHANK3Q9BYB0 1731 aa18.26■□□□□ 0.51
LETMD1-229ENST00000551261 TNS2Q63HR2 1409 aa18.25■□□□□ 0.51
LETMD1-229ENST00000551261 VAMP4O75379 141 aa18.25■□□□□ 0.51
LETMD1-229ENST00000551261 PPP4R2Q9NY27 417 aa18.25■□□□□ 0.51
LETMD1-229ENST00000551261 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-229ENST00000551261 ADAMTS2O95450 1211 aa18.24■□□□□ 0.51
LETMD1-229ENST00000551261 NKX1-1Q15270 411 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-229ENST00000551261 ZKSCAN2Q63HK3 967 aa18.23■□□□□ 0.51
LETMD1-229ENST00000551261 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
LETMD1-229ENST00000551261 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
LETMD1-229ENST00000551261 NUTM2BA6NNL0 878 aaPredicted RBP18.22■□□□□ 0.51
LETMD1-229ENST00000551261 NUTM2EB1AL46 878 aaPredicted RBP18.22■□□□□ 0.51
LETMD1-229ENST00000551261 CYP27B1O15528 508 aa18.22■□□□□ 0.51
LETMD1-229ENST00000551261 BCAR3O75815 825 aa18.22■□□□□ 0.51
LETMD1-229ENST00000551261 MPRIPQ6WCQ1 1025 aa18.22■□□□□ 0.51
LETMD1-229ENST00000551261 NUTM2AQ8IVF1 878 aaPredicted RBP18.22■□□□□ 0.51
LETMD1-229ENST00000551261 SSH1Q8WYL5 1049 aa18.22■□□□□ 0.51
LETMD1-229ENST00000551261 ERVV-2B6SEH9 535 aa18.21■□□□□ 0.51
LETMD1-229ENST00000551261 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms