RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
SCN8A-207ENST00000551216 GCP02774 474 aa18.44■□□□□ 0.54
SCN8A-207ENST00000551216 PDE4AP27815 886 aa18.44■□□□□ 0.54
SCN8A-207ENST00000551216 API5Q9BZZ5 524 aaKnown RBP18.44■□□□□ 0.54
SCN8A-207ENST00000551216 LMTK3Q96Q04 1460 aa18.43■□□□□ 0.54
SCN8A-207ENST00000551216 CAMTA1Q9Y6Y1 1673 aa18.43■□□□□ 0.54
SCN8A-207ENST00000551216 IGHDP01880 384 aa18.43■□□□□ 0.54
SCN8A-207ENST00000551216 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
SCN8A-207ENST00000551216 DCTN1Q14203 1278 aa18.43■□□□□ 0.54
SCN8A-207ENST00000551216 MSH6P52701 1360 aa18.43■□□□□ 0.54
SCN8A-207ENST00000551216 TSPYL6Q8N831 410 aa18.42■□□□□ 0.54
SCN8A-207ENST00000551216 C8orf58Q8NAV2 365 aa18.42■□□□□ 0.54
SCN8A-207ENST00000551216 PCDHB15Q9Y5E8 787 aa18.42■□□□□ 0.54
SCN8A-207ENST00000551216 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
SCN8A-207ENST00000551216 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
SCN8A-207ENST00000551216 MCM10Q7L590 875 aa18.41■□□□□ 0.54
SCN8A-207ENST00000551216 ITPRIPQ8IWB1 547 aa18.41■□□□□ 0.54
SCN8A-207ENST00000551216 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
SCN8A-207ENST00000551216 TNNQ9UQP3 1299 aa18.41■□□□□ 0.54
SCN8A-207ENST00000551216 ABCC4O15439 1325 aa18.41■□□□□ 0.54
SCN8A-207ENST00000551216 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
SCN8A-207ENST00000551216 STRCQ7RTU9 1775 aa18.41■□□□□ 0.54
SCN8A-207ENST00000551216 CACNA1FO60840 1977 aa18.41■□□□□ 0.54
SCN8A-207ENST00000551216 TMEM57Q8N5G2 664 aa18.4■□□□□ 0.54
SCN8A-207ENST00000551216 PTPRCP08575 1304 aa18.39■□□□□ 0.53
SCN8A-207ENST00000551216 XIRP1Q702N8 1843 aaKnown RBP18.39■□□□□ 0.53
SCN8A-207ENST00000551216 ANP32AP39687 249 aaKnown RBP18.38■□□□□ 0.53
SCN8A-207ENST00000551216 CHMP4AQ9BY43 222 aa18.38■□□□□ 0.53
SCN8A-207ENST00000551216 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
SCN8A-207ENST00000551216 FAM161AQ3B820 660 aa18.38■□□□□ 0.53
SCN8A-207ENST00000551216 AMOTQ4VCS5 1084 aa18.38■□□□□ 0.53
SCN8A-207ENST00000551216 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
SCN8A-207ENST00000551216 TSPYL4Q9UJ04 414 aa18.37■□□□□ 0.53
SCN8A-207ENST00000551216 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
SCN8A-207ENST00000551216 MED1Q15648 1581 aaPredicted RBP18.36■□□□□ 0.53
SCN8A-207ENST00000551216 FAM208AQ9UK61 1670 aaKnown RBP18.35■□□□□ 0.53
SCN8A-207ENST00000551216 VIRMAQ69YN4 1812 aaKnown RBP18.35■□□□□ 0.53
SCN8A-207ENST00000551216 KDM4FA0A1W2PPD8 638 aa18.35■□□□□ 0.53
SCN8A-207ENST00000551216 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
SCN8A-207ENST00000551216 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
SCN8A-207ENST00000551216 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
SCN8A-207ENST00000551216 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
SCN8A-207ENST00000551216 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
SCN8A-207ENST00000551216 ZBTB7BO15156 539 aaPredicted RBP18.34■□□□□ 0.53
SCN8A-207ENST00000551216 HSPA2P54652 639 aa18.34■□□□□ 0.53
SCN8A-207ENST00000551216 TAF7Q15545 349 aaPredicted RBP18.34■□□□□ 0.53
SCN8A-207ENST00000551216 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
SCN8A-207ENST00000551216 PXDNQ92626 1479 aa18.34■□□□□ 0.53
SCN8A-207ENST00000551216 INTS3Q68E01 1043 aaKnown RBP18.34■□□□□ 0.53
SCN8A-207ENST00000551216 RGPD2P0DJD1 1756 aa18.33■□□□□ 0.53
SCN8A-207ENST00000551216 SMC5Q8IY18 1101 aa18.33■□□□□ 0.52
SCN8A-207ENST00000551216 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
SCN8A-207ENST00000551216 IL17REQ8NFR9 667 aa18.32■□□□□ 0.52
SCN8A-207ENST00000551216 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
SCN8A-207ENST00000551216 AKAP4Q5JQC9 854 aa18.31■□□□□ 0.52
SCN8A-207ENST00000551216 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
SCN8A-207ENST00000551216 COL18A1P39060 1754 aa18.31■□□□□ 0.52
SCN8A-207ENST00000551216 CPDO75976 1380 aa18.31■□□□□ 0.52
SCN8A-207ENST00000551216 HOXB7P09629 217 aa18.31■□□□□ 0.52
SCN8A-207ENST00000551216 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
SCN8A-207ENST00000551216 SPATA31A3Q5VYP0 1347 aa18.3■□□□□ 0.52
SCN8A-207ENST00000551216 RGS3P49796 1198 aa18.3■□□□□ 0.52
SCN8A-207ENST00000551216 ERBB3P21860 1342 aa18.29■□□□□ 0.52
SCN8A-207ENST00000551216 CCDC30Q5VVM6 783 aa18.29■□□□□ 0.52
SCN8A-207ENST00000551216 PDZRN3Q9UPQ7 1066 aa18.29■□□□□ 0.52
SCN8A-207ENST00000551216 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
SCN8A-207ENST00000551216 RGS12O14924 1447 aa18.29■□□□□ 0.52
SCN8A-207ENST00000551216 RGPD5Q99666 1765 aa18.28■□□□□ 0.52
SCN8A-207ENST00000551216 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
SCN8A-207ENST00000551216 C8orf34Q49A92 452 aa18.28■□□□□ 0.52
SCN8A-207ENST00000551216 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
SCN8A-207ENST00000551216 IPO9Q96P70 1041 aaKnown RBP18.28■□□□□ 0.52
SCN8A-207ENST00000551216 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
SCN8A-207ENST00000551216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCN8A-207ENST00000551216 USHBP1Q8N6Y0 703 aa18.27■□□□□ 0.51
SCN8A-207ENST00000551216 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
SCN8A-207ENST00000551216 C1orf141Q5JVX7 400 aa18.26■□□□□ 0.51
SCN8A-207ENST00000551216 SKAP1Q86WV1 359 aa18.26■□□□□ 0.51
SCN8A-207ENST00000551216 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
SCN8A-207ENST00000551216 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
SCN8A-207ENST00000551216 ZNF530Q6P9A1 599 aaPredicted RBP18.25■□□□□ 0.51
SCN8A-207ENST00000551216 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
SCN8A-207ENST00000551216 BRINP3Q76B58 766 aa18.24■□□□□ 0.51
SCN8A-207ENST00000551216 LRRC59Q96AG4 307 aaKnown RBP18.24■□□□□ 0.51
SCN8A-207ENST00000551216 AXIN2Q9Y2T1 843 aa18.24■□□□□ 0.51
SCN8A-207ENST00000551216 ZBTB7CA1YPR0 619 aa18.23■□□□□ 0.51
SCN8A-207ENST00000551216 MIS18AQ9NYP9 233 aa18.23■□□□□ 0.51
SCN8A-207ENST00000551216 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
SCN8A-207ENST00000551216 PXDNLA1KZ92 1463 aa18.23■□□□□ 0.51
SCN8A-207ENST00000551216 NUCB1Q02818 461 aa18.23■□□□□ 0.51
SCN8A-207ENST00000551216 TEFQ10587 303 aa18.23■□□□□ 0.51
SCN8A-207ENST00000551216 RPAP2Q8IXW5 612 aaPredicted RBP18.23■□□□□ 0.51
SCN8A-207ENST00000551216 DDRGK1Q96HY6 314 aa18.23■□□□□ 0.51
SCN8A-207ENST00000551216 SLAIN2Q9P270 581 aa18.23■□□□□ 0.51
SCN8A-207ENST00000551216 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
SCN8A-207ENST00000551216 MSH5O43196 834 aa18.21■□□□□ 0.51
SCN8A-207ENST00000551216 RNMTO43148 476 aaKnown RBP18.2■□□□□ 0.5
SCN8A-207ENST00000551216 ZC3H6P61129 1189 aaKnown RBP18.2■□□□□ 0.5
SCN8A-207ENST00000551216 RAPGEF4Q8WZA2 1011 aa18.2■□□□□ 0.5
SCN8A-207ENST00000551216 ZNF335Q9H4Z2 1342 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms