RNA–Protein interactions for RNA: ENST00000551016.5

RACGAP1-221, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-221ENST00000551016 DCTN1Q14203 1278 aa8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 TMEM63CQ9P1W3 806 aa8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 NSFL1CQ9UNZ2 370 aaKnown RBP8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 ATP10DQ9P241 1426 aa8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 YEATS2Q9ULM3 1422 aa8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 KIF24Q5T7B8 1368 aa8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 ARHGEF40Q8TER5 1519 aa8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 TERF1P54274 439 aa8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 FOXD4L5Q5VV16 416 aaPredicted RBP8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 ANKRD44Q8N8A2 993 aa8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 FOXD4L4Q8WXT5 416 aaPredicted RBP8.73□□□□□ -1.01
RACGAP1-221ENST00000551016 SYCE3A1L190 88 aa8.72□□□□□ -1.01
RACGAP1-221ENST00000551016 CEP85Q6P2H3 762 aa8.72□□□□□ -1.01
RACGAP1-221ENST00000551016 CASC1Q6TDU7 716 aa8.72□□□□□ -1.01
RACGAP1-221ENST00000551016 FAM13BQ9NYF5 915 aa8.72□□□□□ -1.01
RACGAP1-221ENST00000551016 RIMS2Q9UQ26 1411 aa8.72□□□□□ -1.01
RACGAP1-221ENST00000551016 KRT24Q2M2I5 525 aa8.72□□□□□ -1.01
RACGAP1-221ENST00000551016 LRSAM1Q6UWE0 723 aa8.72□□□□□ -1.01
RACGAP1-221ENST00000551016 ZRANB1Q9UGI0 708 aa8.72□□□□□ -1.01
RACGAP1-221ENST00000551016 LMOD3Q0VAK6 560 aa8.71□□□□□ -1.01
RACGAP1-221ENST00000551016 ZKSCAN5Q9Y2L8 839 aa8.71□□□□□ -1.01
RACGAP1-221ENST00000551016 TMEM131LA2VDJ0 1609 aa8.71□□□□□ -1.02
RACGAP1-221ENST00000551016 RGS12O14924 1447 aa8.71□□□□□ -1.02
RACGAP1-221ENST00000551016 UQCRHLA0A096LP55 91 aa8.71□□□□□ -1.02
RACGAP1-221ENST00000551016 REC8O95072 547 aa8.71□□□□□ -1.02
RACGAP1-221ENST00000551016 UQCRHP07919 91 aa8.71□□□□□ -1.02
RACGAP1-221ENST00000551016 NME9Q86XW9 330 aa8.71□□□□□ -1.02
RACGAP1-221ENST00000551016 RPAP2Q8IXW5 612 aaPredicted RBP8.71□□□□□ -1.02
RACGAP1-221ENST00000551016 SLC52A1Q9NWF4 448 aa8.71□□□□□ -1.02
RACGAP1-221ENST00000551016 MSH6P52701 1360 aa8.7□□□□□ -1.02
RACGAP1-221ENST00000551016 ERC2O15083 957 aa8.7□□□□□ -1.02
RACGAP1-221ENST00000551016 RAPGEF3O95398 923 aa8.7□□□□□ -1.02
RACGAP1-221ENST00000551016 WAPLQ7Z5K2 1190 aa8.7□□□□□ -1.02
RACGAP1-221ENST00000551016 RNF214Q8ND24 703 aa8.7□□□□□ -1.02
RACGAP1-221ENST00000551016 MEIS3Q99687 375 aa8.7□□□□□ -1.02
RACGAP1-221ENST00000551016 ALKQ9UM73 1620 aa8.7□□□□□ -1.02
RACGAP1-221ENST00000551016 RTL1A6NKG5 1358 aa8.7□□□□□ -1.02
RACGAP1-221ENST00000551016 RRS1Q15050 365 aaKnown RBP8.69□□□□□ -1.02
RACGAP1-221ENST00000551016 CCDC39Q9UFE4 941 aa8.69□□□□□ -1.02
RACGAP1-221ENST00000551016 ATP7BP35670 1465 aa8.69□□□□□ -1.02
RACGAP1-221ENST00000551016 CDK12Q9NYV4 1490 aaPredicted RBP8.69□□□□□ -1.02
RACGAP1-221ENST00000551016 NEK4P51957 841 aa8.69□□□□□ -1.02
RACGAP1-221ENST00000551016 TMX3Q96JJ7 454 aa8.69□□□□□ -1.02
RACGAP1-221ENST00000551016 MCM5P33992 734 aa8.68□□□□□ -1.02
RACGAP1-221ENST00000551016 CSPP1Q1MSJ5 1256 aa8.68□□□□□ -1.02
RACGAP1-221ENST00000551016 CPSF1Q10570 1443 aaKnown RBP8.68□□□□□ -1.02
RACGAP1-221ENST00000551016 DIP2CQ9Y2E4 1556 aa8.68□□□□□ -1.02
RACGAP1-221ENST00000551016 PREX1Q8TCU6 1659 aa8.68□□□□□ -1.02
RACGAP1-221ENST00000551016 BRD1O95696 1058 aa8.68□□□□□ -1.02
RACGAP1-221ENST00000551016 MBD3O95983 291 aa8.68□□□□□ -1.02
RACGAP1-221ENST00000551016 TSHZ3Q63HK5 1081 aa8.68□□□□□ -1.02
RACGAP1-221ENST00000551016 PDE1AP54750 535 aa8.67□□□□□ -1.02
RACGAP1-221ENST00000551016 NOL8Q76FK4 1167 aaKnown RBP8.67□□□□□ -1.02
RACGAP1-221ENST00000551016 AEBP1Q8IUX7 1158 aa8.67□□□□□ -1.02
RACGAP1-221ENST00000551016 MAP7D2Q96T17 732 aa8.67□□□□□ -1.02
RACGAP1-221ENST00000551016 EDC4Q6P2E9 1401 aaKnown RBP8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 FBXO31Q5XUX0 539 aaPredicted RBP8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 SASS6Q6UVJ0 657 aa8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 MCM10Q7L590 875 aa8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 ARID3AQ99856 593 aa8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 TSPY26PQ9H489 355 aa8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 PALD1Q9ULE6 856 aa8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 AATKQ6ZMQ8 1374 aa8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 DYNC1I1O14576 645 aa8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 FOXD4L6Q3SYB3 417 aaPredicted RBP8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 FOXD4L3Q6VB84 417 aaPredicted RBP8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 OSBPL3Q9H4L5 887 aa8.66□□□□□ -1.02
RACGAP1-221ENST00000551016 PTPRCP08575 1304 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 NCKAP5LQ9HCH0 1330 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 ZBTB7CA1YPR0 619 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 CHL1O00533 1208 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 PTMAP06454 111 aaKnown RBP8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 NPM1P06748 294 aaKnown RBP eCLIP8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 CUL4AQ13619 759 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 COG3Q96JB2 828 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 ESYT1Q9BSJ8 1104 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 GDPD2Q9HCC8 539 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 CPS1P31327 1500 aa8.65□□□□□ -1.02
RACGAP1-221ENST00000551016 GADD45BO75293 160 aaPredicted RBP8.65□□□□□ -1.03
RACGAP1-221ENST00000551016 HMMRO75330 724 aa8.65□□□□□ -1.03
RACGAP1-221ENST00000551016 SLC4A2P04920 1241 aa8.65□□□□□ -1.03
RACGAP1-221ENST00000551016 SULT6B1Q6IMI4 303 aa8.65□□□□□ -1.03
RACGAP1-221ENST00000551016 SLC4A10Q6U841 1118 aa8.65□□□□□ -1.03
RACGAP1-221ENST00000551016 MPNDQ8N594 471 aa8.65□□□□□ -1.03
RACGAP1-221ENST00000551016 EXOC6BQ9Y2D4 811 aa8.65□□□□□ -1.03
RACGAP1-221ENST00000551016 TUBGCP6Q96RT7 1819 aa8.64□□□□□ -1.03
RACGAP1-221ENST00000551016 F6X3S4 739 aa8.64□□□□□ -1.03
RACGAP1-221ENST00000551016 MCM2P49736 904 aa8.64□□□□□ -1.03
RACGAP1-221ENST00000551016 KIAA2012Q0VF49 1180 aa8.64□□□□□ -1.03
RACGAP1-221ENST00000551016 G2E3Q7L622 706 aa8.64□□□□□ -1.03
RACGAP1-221ENST00000551016 STAG3Q9UJ98 1225 aa8.64□□□□□ -1.03
RACGAP1-221ENST00000551016 KIAA0232Q92628 1395 aa8.64□□□□□ -1.03
RACGAP1-221ENST00000551016 DLC1Q96QB1 1528 aa8.64□□□□□ -1.03
RACGAP1-221ENST00000551016 HAP1P54257 671 aaPredicted RBP8.63□□□□□ -1.03
RACGAP1-221ENST00000551016 UPF3BQ9BZI7 483 aaKnown RBP8.63□□□□□ -1.03
RACGAP1-221ENST00000551016 ANO2Q9NQ90 1003 aa8.63□□□□□ -1.03
RACGAP1-221ENST00000551016 MIS18AQ9NYP9 233 aa8.63□□□□□ -1.03
RACGAP1-221ENST00000551016 TCHHQ07283 1943 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms