RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 ZNF592Q92610 1267 aa8.97□□□□□ -0.97
RAB3IP-214ENST00000550847 NXF1Q9UBU9 619 aaKnown RBP8.97□□□□□ -0.97
RAB3IP-214ENST00000550847 CHIC2Q9UKJ5 165 aa8.97□□□□□ -0.97
RAB3IP-214ENST00000550847 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
RAB3IP-214ENST00000550847 ALG2Q9H553 416 aa8.96□□□□□ -0.98
RAB3IP-214ENST00000550847 ATP5J2-PTCD1G3V325 749 aa8.95□□□□□ -0.98
RAB3IP-214ENST00000550847 WFS1O76024 890 aa8.95□□□□□ -0.98
RAB3IP-214ENST00000550847 CCDC125Q86Z20 511 aa8.95□□□□□ -0.98
RAB3IP-214ENST00000550847 POLMQ9NP87 494 aaPredicted RBP8.95□□□□□ -0.98
RAB3IP-214ENST00000550847 H3BM21 787 aa8.94□□□□□ -0.98
RAB3IP-214ENST00000550847 RAD21O60216 631 aa8.94□□□□□ -0.98
RAB3IP-214ENST00000550847 STAU1O95793 577 aaKnown RBP8.94□□□□□ -0.98
RAB3IP-214ENST00000550847 SEMA3FQ13275 785 aa8.94□□□□□ -0.98
RAB3IP-214ENST00000550847 SLFNL1Q499Z3 407 aa8.94□□□□□ -0.98
RAB3IP-214ENST00000550847 RNF135Q8IUD6 432 aa8.94□□□□□ -0.98
RAB3IP-214ENST00000550847 FNBP4Q8N3X1 1017 aaPredicted RBP8.94□□□□□ -0.98
RAB3IP-214ENST00000550847 DOLKQ9UPQ8 538 aa8.94□□□□□ -0.98
RAB3IP-214ENST00000550847 A0A1W2PRU2 124 aa8.93□□□□□ -0.98
RAB3IP-214ENST00000550847 ARHGEF10LQ9HCE6 1279 aa8.93□□□□□ -0.98
RAB3IP-214ENST00000550847 ERBB4Q15303 1308 aa8.93□□□□□ -0.98
RAB3IP-214ENST00000550847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.92□□□□□ -0.98
RAB3IP-214ENST00000550847 RAB6BQ9NRW1 208 aa8.92□□□□□ -0.98
RAB3IP-214ENST00000550847 SOX11P35716 441 aa8.91□□□□□ -0.98
RAB3IP-214ENST00000550847 PTSQ03393 145 aa8.91□□□□□ -0.98
RAB3IP-214ENST00000550847 OXLD1Q5BKU9 147 aa8.91□□□□□ -0.98
RAB3IP-214ENST00000550847 CYP2U1Q7Z449 544 aa8.91□□□□□ -0.98
RAB3IP-214ENST00000550847 MEN1O00255 615 aa8.9□□□□□ -0.98
RAB3IP-214ENST00000550847 PPFIA3O75145 1194 aa8.9□□□□□ -0.98
RAB3IP-214ENST00000550847 PLPP7Q8NBV4 271 aa8.9□□□□□ -0.98
RAB3IP-214ENST00000550847 SENP3-EIF4A1A0A087X0R7 540 aa8.89□□□□□ -0.99
RAB3IP-214ENST00000550847 IL2RAP01589 272 aa8.89□□□□□ -0.99
RAB3IP-214ENST00000550847 RNF144AP50876 292 aaPredicted RBP8.89□□□□□ -0.99
RAB3IP-214ENST00000550847 PROSER2Q86WR7 435 aaPredicted RBP8.89□□□□□ -0.99
RAB3IP-214ENST00000550847 NPAS3Q8IXF0 933 aa8.89□□□□□ -0.99
RAB3IP-214ENST00000550847 UCN2Q96RP3 112 aa8.89□□□□□ -0.99
RAB3IP-214ENST00000550847 CLN3Q13286 438 aa8.88□□□□□ -0.99
RAB3IP-214ENST00000550847 SLC35F4A4IF30 521 aa8.87□□□□□ -0.99
RAB3IP-214ENST00000550847 MYCP01106 439 aaPredicted RBP8.87□□□□□ -0.99
RAB3IP-214ENST00000550847 PRICKLE2Q7Z3G6 844 aa8.87□□□□□ -0.99
RAB3IP-214ENST00000550847 WWC1Q8IX03 1113 aa8.87□□□□□ -0.99
RAB3IP-214ENST00000550847 CCDC155Q8N6L0 562 aa8.87□□□□□ -0.99
RAB3IP-214ENST00000550847 HRH3Q9Y5N1 445 aa8.87□□□□□ -0.99
RAB3IP-214ENST00000550847 RHOQP17081 205 aa8.86□□□□□ -0.99
RAB3IP-214ENST00000550847 GMPRP36959 345 aa8.86□□□□□ -0.99
RAB3IP-214ENST00000550847 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
RAB3IP-214ENST00000550847 LYSMD3Q7Z3D4 306 aa8.86□□□□□ -0.99
RAB3IP-214ENST00000550847 GNRH1P01148 92 aa8.85□□□□□ -0.99
RAB3IP-214ENST00000550847 SKIP12755 728 aa8.85□□□□□ -0.99
RAB3IP-214ENST00000550847 SCNN1DP51172 638 aa8.85□□□□□ -0.99
RAB3IP-214ENST00000550847 USP4Q13107 963 aa8.85□□□□□ -0.99
RAB3IP-214ENST00000550847 MAP7D1Q3KQU3 841 aa8.85□□□□□ -0.99
RAB3IP-214ENST00000550847 TRIM52Q96A61 297 aa8.85□□□□□ -0.99
RAB3IP-214ENST00000550847 GRIP2Q9C0E4 1043 aa8.85□□□□□ -0.99
RAB3IP-214ENST00000550847 ETNK1Q9HBU6 452 aa8.85□□□□□ -0.99
RAB3IP-214ENST00000550847 WIPF1O43516 503 aa8.84□□□□□ -0.99
RAB3IP-214ENST00000550847 VSIG8P0DPA2 414 aa8.84□□□□□ -0.99
RAB3IP-214ENST00000550847 TBC1D9Q6ZT07 1266 aa8.84□□□□□ -0.99
RAB3IP-214ENST00000550847 DEPDC4Q8N2C3 294 aa8.84□□□□□ -0.99
RAB3IP-214ENST00000550847 SLC16A10Q8TF71 515 aa8.84□□□□□ -0.99
RAB3IP-214ENST00000550847 CNKSR1Q969H4 720 aa8.84□□□□□ -0.99
RAB3IP-214ENST00000550847 NLRP3Q96P20 1036 aa8.84□□□□□ -0.99
RAB3IP-214ENST00000550847 A6NJR5 290 aa8.83□□□□□ -1
RAB3IP-214ENST00000550847 GPC1P35052 558 aa8.83□□□□□ -1
RAB3IP-214ENST00000550847 IRF7Q92985 503 aa8.83□□□□□ -1
RAB3IP-214ENST00000550847 ESYT1Q9BSJ8 1104 aa8.83□□□□□ -1
RAB3IP-214ENST00000550847 FHDC1Q9C0D6 1143 aaPredicted RBP8.83□□□□□ -1
RAB3IP-214ENST00000550847 ESF1Q9H501 851 aaKnown RBP8.83□□□□□ -1
RAB3IP-214ENST00000550847 CUEDC1Q9NWM3 386 aaPredicted RBP8.83□□□□□ -1
RAB3IP-214ENST00000550847 USP17L5A8MUK1 530 aa8.82□□□□□ -1
RAB3IP-214ENST00000550847 CENPCQ03188 943 aa8.82□□□□□ -1
RAB3IP-214ENST00000550847 POU4F2Q12837 409 aa8.82□□□□□ -1
RAB3IP-214ENST00000550847 NCOA4Q13772 614 aa8.82□□□□□ -1
RAB3IP-214ENST00000550847 GPR161Q8N6U8 529 aaKnown RBP8.82□□□□□ -1
RAB3IP-214ENST00000550847 NFATC2IPQ8NCF5 419 aa8.82□□□□□ -1
RAB3IP-214ENST00000550847 GLMNQ92990 594 aa8.82□□□□□ -1
RAB3IP-214ENST00000550847 XAGE2Q96GT9 111 aa8.82□□□□□ -1
RAB3IP-214ENST00000550847 PCDHGA11Q9Y5H2 935 aa8.82□□□□□ -1
RAB3IP-214ENST00000550847 ITGA6P23229 1130 aa8.81□□□□□ -1
RAB3IP-214ENST00000550847 SLC27A3Q5K4L6 730 aa8.81□□□□□ -1
RAB3IP-214ENST00000550847 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
RAB3IP-214ENST00000550847 NBPF15Q8N660 670 aa8.8□□□□□ -1
RAB3IP-214ENST00000550847 TMEM229AB2RXF0 380 aa8.79□□□□□ -1
RAB3IP-214ENST00000550847 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
RAB3IP-214ENST00000550847 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
RAB3IP-214ENST00000550847 GDF10P55107 478 aa8.79□□□□□ -1
RAB3IP-214ENST00000550847 KRT76Q01546 638 aa8.79□□□□□ -1
RAB3IP-214ENST00000550847 INHAP05111 366 aa8.78□□□□□ -1
RAB3IP-214ENST00000550847 EML3Q32P44 896 aa8.78□□□□□ -1
RAB3IP-214ENST00000550847 HOMEZQ8IX15 550 aa8.78□□□□□ -1
RAB3IP-214ENST00000550847 SIRT1Q96EB6 747 aa8.78□□□□□ -1
RAB3IP-214ENST00000550847 USP17L3A6NCW0 530 aa8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 USP17L4A6NCW7 530 aa8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 GTF2IP78347 998 aa8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 ESCO1Q5FWF5 840 aa8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 USP17L2Q6R6M4 530 aa8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 USP17L1Q7RTZ2 530 aa8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 VWA5B2Q8N398 1253 aa8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 NANOS1Q8WY41 292 aaKnown RBP8.77□□□□□ -1.01
RAB3IP-214ENST00000550847 KIAA1024Q9UPX6 916 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms