RNA–Protein interactions for RNA: ENST00000550798.1

PPFIA2-221, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-221ENST00000550798 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
PPFIA2-221ENST00000550798 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
PPFIA2-221ENST00000550798 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
PPFIA2-221ENST00000550798 FLT4P35916 1363 aa16.26■□□□□ 0.19
PPFIA2-221ENST00000550798 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
PPFIA2-221ENST00000550798 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
PPFIA2-221ENST00000550798 INSRP06213 1382 aa16.26■□□□□ 0.19
PPFIA2-221ENST00000550798 QSER1Q2KHR3 1735 aa16.25■□□□□ 0.19
PPFIA2-221ENST00000550798 PRIM1P49642 420 aaKnown RBP16.25■□□□□ 0.19
PPFIA2-221ENST00000550798 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
PPFIA2-221ENST00000550798 LRRC4BQ9NT99 713 aa16.25■□□□□ 0.19
PPFIA2-221ENST00000550798 NSD3Q9BZ95 1437 aa16.25■□□□□ 0.19
PPFIA2-221ENST00000550798 LY75O60449 1722 aa16.25■□□□□ 0.19
PPFIA2-221ENST00000550798 TATP17735 454 aaPredicted RBP16.24■□□□□ 0.19
PPFIA2-221ENST00000550798 YY1P25490 414 aa16.24■□□□□ 0.19
PPFIA2-221ENST00000550798 ZNF827Q17R98 1081 aa16.24■□□□□ 0.19
PPFIA2-221ENST00000550798 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
PPFIA2-221ENST00000550798 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
PPFIA2-221ENST00000550798 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
PPFIA2-221ENST00000550798 AKT1S1Q96B36 256 aa16.22■□□□□ 0.19
PPFIA2-221ENST00000550798 SGIP1Q9BQI5 828 aa16.22■□□□□ 0.19
PPFIA2-221ENST00000550798 NSD2O96028 1365 aa16.22■□□□□ 0.19
PPFIA2-221ENST00000550798 SLC16A10Q8TF71 515 aa16.21■□□□□ 0.19
PPFIA2-221ENST00000550798 SYT17Q9BSW7 474 aa16.21■□□□□ 0.19
PPFIA2-221ENST00000550798 FHDC1Q9C0D6 1143 aaPredicted RBP16.21■□□□□ 0.19
PPFIA2-221ENST00000550798 MAP2P11137 1827 aaKnown RBP16.21■□□□□ 0.19
PPFIA2-221ENST00000550798 PCDH11XQ9BZA7 1347 aa16.2■□□□□ 0.18
PPFIA2-221ENST00000550798 PCDH11YQ9BZA8 1340 aa16.2■□□□□ 0.18
PPFIA2-221ENST00000550798 ARXQ96QS3 562 aa16.2■□□□□ 0.18
PPFIA2-221ENST00000550798 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
PPFIA2-221ENST00000550798 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
PPFIA2-221ENST00000550798 ANKRD26Q9UPS8 1709 aa16.19■□□□□ 0.18
PPFIA2-221ENST00000550798 TUBGCP6Q96RT7 1819 aa16.19■□□□□ 0.18
PPFIA2-221ENST00000550798 CCNL1Q9UK58 526 aaPredicted RBP16.19■□□□□ 0.18
PPFIA2-221ENST00000550798 PPM1GO15355 546 aaPredicted RBP16.18■□□□□ 0.18
PPFIA2-221ENST00000550798 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
PPFIA2-221ENST00000550798 PNPLA7Q6ZV29 1317 aa16.18■□□□□ 0.18
PPFIA2-221ENST00000550798 PKD1L3Q7Z443 1732 aa16.17■□□□□ 0.18
PPFIA2-221ENST00000550798 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
PPFIA2-221ENST00000550798 POLD1P28340 1107 aa16.17■□□□□ 0.18
PPFIA2-221ENST00000550798 KCNQ4P56696 695 aa16.17■□□□□ 0.18
PPFIA2-221ENST00000550798 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
PPFIA2-221ENST00000550798 MAP3K5Q99683 1374 aa16.16■□□□□ 0.18
PPFIA2-221ENST00000550798 WASHC2AQ641Q2 1341 aa16.16■□□□□ 0.18
PPFIA2-221ENST00000550798 ITGB4P16144 1822 aa16.15■□□□□ 0.18
PPFIA2-221ENST00000550798 EIF4G2P78344 907 aaKnown RBP eCLIP16.15■□□□□ 0.18
PPFIA2-221ENST00000550798 C5P01031 1676 aa16.14■□□□□ 0.18
PPFIA2-221ENST00000550798 CHD4Q14839 1912 aa16.14■□□□□ 0.17
PPFIA2-221ENST00000550798 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
PPFIA2-221ENST00000550798 MPRIPQ6WCQ1 1025 aa16.14■□□□□ 0.17
PPFIA2-221ENST00000550798 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
PPFIA2-221ENST00000550798 TAF1LQ8IZX4 1826 aa16.13■□□□□ 0.17
PPFIA2-221ENST00000550798 CYP27B1O15528 508 aa16.13■□□□□ 0.17
PPFIA2-221ENST00000550798 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
PPFIA2-221ENST00000550798 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
PPFIA2-221ENST00000550798 PALLDQ8WX93 1383 aa16.12■□□□□ 0.17
PPFIA2-221ENST00000550798 MSH5O43196 834 aa16.11■□□□□ 0.17
PPFIA2-221ENST00000550798 HSPA5P11021 654 aaKnown RBP16.11■□□□□ 0.17
PPFIA2-221ENST00000550798 KLHL34Q8N239 644 aa16.11■□□□□ 0.17
PPFIA2-221ENST00000550798 CCER1Q8TC90 406 aaPredicted RBP16.11■□□□□ 0.17
PPFIA2-221ENST00000550798 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
PPFIA2-221ENST00000550798 EYA1Q99502 592 aa16.11■□□□□ 0.17
PPFIA2-221ENST00000550798 NKX1-1Q15270 411 aaPredicted RBP16.1■□□□□ 0.17
PPFIA2-221ENST00000550798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.17
PPFIA2-221ENST00000550798 TNNT2P45379 298 aaPredicted RBP16.09■□□□□ 0.17
PPFIA2-221ENST00000550798 COL23A1Q86Y22 540 aaPredicted RBP16.09■□□□□ 0.17
PPFIA2-221ENST00000550798 FLAD1Q8NFF5 587 aa16.09■□□□□ 0.17
PPFIA2-221ENST00000550798 GPR162Q16538 588 aa16.08■□□□□ 0.16
PPFIA2-221ENST00000550798 PANK3Q9H999 370 aa16.08■□□□□ 0.16
PPFIA2-221ENST00000550798 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
PPFIA2-221ENST00000550798 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
PPFIA2-221ENST00000550798 PLEKHG2Q9H7P9 1386 aa16.07■□□□□ 0.16
PPFIA2-221ENST00000550798 C4BP0C0L5 1744 aa16.07■□□□□ 0.16
PPFIA2-221ENST00000550798 PIGBQ92521 554 aa16.06■□□□□ 0.16
PPFIA2-221ENST00000550798 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
PPFIA2-221ENST00000550798 PHKG2P15735 406 aa16.05■□□□□ 0.16
PPFIA2-221ENST00000550798 AK7Q96M32 723 aa16.05■□□□□ 0.16
PPFIA2-221ENST00000550798 UBR3Q6ZT12 1888 aa16.04■□□□□ 0.16
PPFIA2-221ENST00000550798 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
PPFIA2-221ENST00000550798 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
PPFIA2-221ENST00000550798 ZNF784Q8NCA9 323 aaPredicted RBP16.03■□□□□ 0.16
PPFIA2-221ENST00000550798 IGSF1Q8N6C5 1336 aa16.02■□□□□ 0.16
PPFIA2-221ENST00000550798 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.16
PPFIA2-221ENST00000550798 SIK1P57059 783 aa16.02■□□□□ 0.16
PPFIA2-221ENST00000550798 MORC1Q86VD1 984 aa16.02■□□□□ 0.16
PPFIA2-221ENST00000550798 NLGN2Q8NFZ4 835 aa16.02■□□□□ 0.16
PPFIA2-221ENST00000550798 UTRNP46939 3433 aa16.02■□□□□ 0.15
PPFIA2-221ENST00000550798 KNSTRNQ9Y448 316 aa16.01■□□□□ 0.15
PPFIA2-221ENST00000550798 PHF14O94880 888 aa16■□□□□ 0.15
PPFIA2-221ENST00000550798 HSP90AB1P08238 724 aaKnown RBP16■□□□□ 0.15
PPFIA2-221ENST00000550798 ATP6V1AP38606 617 aa16■□□□□ 0.15
PPFIA2-221ENST00000550798 PLEKHO1Q53GL0 409 aaPredicted RBP16■□□□□ 0.15
PPFIA2-221ENST00000550798 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
PPFIA2-221ENST00000550798 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
PPFIA2-221ENST00000550798 SSFA2P28290 1259 aa15.99■□□□□ 0.15
PPFIA2-221ENST00000550798 AMOTQ4VCS5 1084 aa15.99■□□□□ 0.15
PPFIA2-221ENST00000550798 LINC00116Q8NCU8 138 aa15.99■□□□□ 0.15
PPFIA2-221ENST00000550798 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
PPFIA2-221ENST00000550798 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
PPFIA2-221ENST00000550798 GRIN3BO60391 1043 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms