RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 CGNL1Q0VF96 1302 aa28.86■■■□□ 2.21
CACNB3-218ENST00000550771 NBPF6Q5VWK0 638 aa28.85■■■□□ 2.21
CACNB3-218ENST00000550771 SYTL4Q96C24 671 aaPredicted RBP28.85■■■□□ 2.21
CACNB3-218ENST00000550771 NBPF4Q96M43 638 aa28.85■■■□□ 2.21
CACNB3-218ENST00000550771 SMG6Q86US8 1419 aaKnown RBP28.84■■■□□ 2.21
CACNB3-218ENST00000550771 SLC16A10Q8TF71 515 aa28.82■■■□□ 2.2
CACNB3-218ENST00000550771 ARXQ96QS3 562 aa28.82■■■□□ 2.2
CACNB3-218ENST00000550771 NSD2O96028 1365 aa28.82■■■□□ 2.2
CACNB3-218ENST00000550771 KIF24Q5T7B8 1368 aa28.82■■■□□ 2.2
CACNB3-218ENST00000550771 INSRP06213 1382 aa28.81■■■□□ 2.2
CACNB3-218ENST00000550771 RAPGEF4Q8WZA2 1011 aa28.8■■■□□ 2.2
CACNB3-218ENST00000550771 TIMELESSQ9UNS1 1208 aa28.8■■■□□ 2.2
CACNB3-218ENST00000550771 MAP3K5Q99683 1374 aa28.79■■■□□ 2.2
CACNB3-218ENST00000550771 RGPD2P0DJD1 1756 aa28.79■■■□□ 2.2
CACNB3-218ENST00000550771 FLT4P35916 1363 aa28.78■■■□□ 2.2
CACNB3-218ENST00000550771 SHANK3Q9BYB0 1731 aa28.78■■■□□ 2.2
CACNB3-218ENST00000550771 HSP90AB2PQ58FF8 381 aa28.78■■■□□ 2.2
CACNB3-218ENST00000550771 USHBP1Q8N6Y0 703 aa28.77■■■□□ 2.2
CACNB3-218ENST00000550771 DOT1LQ8TEK3 1739 aa28.77■■■□□ 2.2
CACNB3-218ENST00000550771 PNPLA7Q6ZV29 1317 aa28.76■■■□□ 2.19
CACNB3-218ENST00000550771 TATP17735 454 aaPredicted RBP28.76■■■□□ 2.19
CACNB3-218ENST00000550771 CARD14Q9BXL6 1004 aa28.76■■■□□ 2.19
CACNB3-218ENST00000550771 TFCP2L1Q9NZI6 479 aa28.76■■■□□ 2.19
CACNB3-218ENST00000550771 KCNQ4P56696 695 aa28.74■■■□□ 2.19
CACNB3-218ENST00000550771 QSER1Q2KHR3 1735 aa28.74■■■□□ 2.19
CACNB3-218ENST00000550771 CCNL1Q9UK58 526 aaPredicted RBP28.73■■■□□ 2.19
CACNB3-218ENST00000550771 LY75O60449 1722 aa28.72■■■□□ 2.19
CACNB3-218ENST00000550771 NSD3Q9BZ95 1437 aa28.72■■■□□ 2.19
CACNB3-218ENST00000550771 KIF20BQ96Q89 1820 aa28.72■■■□□ 2.19
CACNB3-218ENST00000550771 PCDH11XQ9BZA7 1347 aa28.71■■■□□ 2.19
CACNB3-218ENST00000550771 PCDH11YQ9BZA8 1340 aa28.71■■■□□ 2.19
CACNB3-218ENST00000550771 POLD1P28340 1107 aa28.71■■■□□ 2.19
CACNB3-218ENST00000550771 CLSPNQ9HAW4 1339 aa28.7■■■□□ 2.19
CACNB3-218ENST00000550771 EMILIN1Q9Y6C2 1016 aa28.68■■■□□ 2.18
CACNB3-218ENST00000550771 HMGB2P26583 209 aaKnown RBP28.67■■■□□ 2.18
CACNB3-218ENST00000550771 UTRNP46939 3433 aa28.66■■■□□ 2.18
CACNB3-218ENST00000550771 COL24A1Q17RW2 1714 aa28.65■■■□□ 2.18
CACNB3-218ENST00000550771 CYP27B1O15528 508 aa28.64■■■□□ 2.18
CACNB3-218ENST00000550771 NCAPD2Q15021 1401 aa28.63■■■□□ 2.17
CACNB3-218ENST00000550771 ZNF784Q8NCA9 323 aaPredicted RBP28.62■■■□□ 2.17
CACNB3-218ENST00000550771 WASHC2AQ641Q2 1341 aa28.62■■■□□ 2.17
CACNB3-218ENST00000550771 TUBGCP6Q96RT7 1819 aa28.62■■■□□ 2.17
CACNB3-218ENST00000550771 PPM1GO15355 546 aaPredicted RBP28.61■■■□□ 2.17
CACNB3-218ENST00000550771 COL23A1Q86Y22 540 aaPredicted RBP28.61■■■□□ 2.17
CACNB3-218ENST00000550771 MPRIPQ6WCQ1 1025 aa28.6■■■□□ 2.17
CACNB3-218ENST00000550771 PALLDQ8WX93 1383 aa28.6■■■□□ 2.17
CACNB3-218ENST00000550771 GPR162Q16538 588 aa28.59■■■□□ 2.17
CACNB3-218ENST00000550771 KLHL34Q8N239 644 aa28.59■■■□□ 2.17
CACNB3-218ENST00000550771 NKX1-1Q15270 411 aaPredicted RBP28.58■■■□□ 2.17
CACNB3-218ENST00000550771 SMARCC1Q92922 1105 aaPredicted RBP28.58■■■□□ 2.17
CACNB3-218ENST00000550771 MSH5O43196 834 aa28.57■■■□□ 2.16
CACNB3-218ENST00000550771 SPG7Q9UQ90 795 aa28.57■■■□□ 2.16
CACNB3-218ENST00000550771 ANKRD26Q9UPS8 1709 aa28.57■■■□□ 2.16
CACNB3-218ENST00000550771 FLAD1Q8NFF5 587 aa28.56■■■□□ 2.16
CACNB3-218ENST00000550771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.56■■■□□ 2.16
CACNB3-218ENST00000550771 POLKQ9UBT6 870 aa28.56■■■□□ 2.16
CACNB3-218ENST00000550771 PKD1L3Q7Z443 1732 aa28.55■■■□□ 2.16
CACNB3-218ENST00000550771 EYA1Q99502 592 aa28.55■■■□□ 2.16
CACNB3-218ENST00000550771 PCGF6Q9BYE7 350 aa28.55■■■□□ 2.16
CACNB3-218ENST00000550771 CHD4Q14839 1912 aa28.53■■■□□ 2.16
CACNB3-218ENST00000550771 C5P01031 1676 aa28.52■■■□□ 2.16
CACNB3-218ENST00000550771 NLGN2Q8NFZ4 835 aa28.52■■■□□ 2.16
CACNB3-218ENST00000550771 PIGBQ92521 554 aa28.52■■■□□ 2.16
CACNB3-218ENST00000550771 POLR3GLQ9BT43 218 aa28.51■■■□□ 2.15
CACNB3-218ENST00000550771 TOGARAM1Q9Y4F4 1720 aa28.51■■■□□ 2.15
CACNB3-218ENST00000550771 EIF4G2P78344 907 aaKnown RBP eCLIP28.48■■■□□ 2.15
CACNB3-218ENST00000550771 MSL1Q68DK7 614 aa28.48■■■□□ 2.15
CACNB3-218ENST00000550771 PLEKHG2Q9H7P9 1386 aa28.48■■■□□ 2.15
CACNB3-218ENST00000550771 IFNL2Q8IZJ0 200 aa28.47■■■□□ 2.15
CACNB3-218ENST00000550771 PELP1Q8IZL8 1130 aaKnown RBP28.47■■■□□ 2.15
CACNB3-218ENST00000550771 AK7Q96M32 723 aa28.47■■■□□ 2.15
CACNB3-218ENST00000550771 MAP2P11137 1827 aaKnown RBP28.47■■■□□ 2.15
CACNB3-218ENST00000550771 ITGB4P16144 1822 aa28.46■■■□□ 2.15
CACNB3-218ENST00000550771 EIF4A2Q14240 407 aaKnown RBP28.46■■■□□ 2.15
CACNB3-218ENST00000550771 TAF1LQ8IZX4 1826 aa28.46■■■□□ 2.15
CACNB3-218ENST00000550771 PHKG2P15735 406 aa28.45■■■□□ 2.14
CACNB3-218ENST00000550771 TMOD3Q9NYL9 352 aa28.45■■■□□ 2.14
CACNB3-218ENST00000550771 C4BP0C0L5 1744 aa28.44■■■□□ 2.14
CACNB3-218ENST00000550771 LOC102724428A0A0B4J2F2 783 aa28.44■■■□□ 2.14
CACNB3-218ENST00000550771 TNNT2P45379 298 aaPredicted RBP28.44■■■□□ 2.14
CACNB3-218ENST00000550771 SIK1P57059 783 aa28.44■■■□□ 2.14
CACNB3-218ENST00000550771 CD2APQ9Y5K6 639 aa28.44■■■□□ 2.14
CACNB3-218ENST00000550771 GRIN3BO60391 1043 aa28.43■■■□□ 2.14
CACNB3-218ENST00000550771 HSPA5P11021 654 aaKnown RBP28.42■■■□□ 2.14
CACNB3-218ENST00000550771 PANK3Q9H999 370 aa28.42■■■□□ 2.14
CACNB3-218ENST00000550771 AMIGO3Q86WK7 504 aa28.41■■■□□ 2.14
CACNB3-218ENST00000550771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.4■■■□□ 2.14
CACNB3-218ENST00000550771 YBX3P16989 372 aaKnown RBP eCLIP28.4■■■□□ 2.14
CACNB3-218ENST00000550771 SSFA2P28290 1259 aa28.4■■■□□ 2.14
CACNB3-218ENST00000550771 ASAP1Q9ULH1 1129 aa28.4■■■□□ 2.14
CACNB3-218ENST00000550771 IGSF1Q8N6C5 1336 aa28.4■■■□□ 2.14
CACNB3-218ENST00000550771 LINC00116Q8NCU8 138 aa28.39■■■□□ 2.14
CACNB3-218ENST00000550771 PHF14O94880 888 aa28.37■■■□□ 2.13
CACNB3-218ENST00000550771 GOLGB1Q14789 3259 aaKnown RBP28.37■■■□□ 2.13
CACNB3-218ENST00000550771 ATG3Q9NT62 314 aa28.36■■■□□ 2.13
CACNB3-218ENST00000550771 HSP90AB1P08238 724 aaKnown RBP28.35■■■□□ 2.13
CACNB3-218ENST00000550771 ATP6V1AP38606 617 aa28.35■■■□□ 2.13
CACNB3-218ENST00000550771 C1QTNF8P60827 252 aa28.35■■■□□ 2.13
CACNB3-218ENST00000550771 ITPK1Q13572 414 aa28.35■■■□□ 2.13
CACNB3-218ENST00000550771 UBR3Q6ZT12 1888 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms