RNA–Protein interactions for RNA: ENST00000550582.2

NR4A1-216, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-216ENST00000550582 COL24A1Q17RW2 1714 aa20.44■□□□□ 0.86
NR4A1-216ENST00000550582 NSD2O96028 1365 aa20.44■□□□□ 0.86
NR4A1-216ENST00000550582 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
NR4A1-216ENST00000550582 HOXC9P31274 260 aa20.43■□□□□ 0.86
NR4A1-216ENST00000550582 DOT1LQ8TEK3 1739 aa20.43■□□□□ 0.86
NR4A1-216ENST00000550582 MAP3K19Q56UN5 1328 aa20.43■□□□□ 0.86
NR4A1-216ENST00000550582 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
NR4A1-216ENST00000550582 MSH5O43196 834 aa20.42■□□□□ 0.86
NR4A1-216ENST00000550582 ZCRB1Q8TBF4 217 aaKnown RBP20.42■□□□□ 0.86
NR4A1-216ENST00000550582 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
NR4A1-216ENST00000550582 AMPHP49418 695 aa20.41■□□□□ 0.86
NR4A1-216ENST00000550582 COG3Q96JB2 828 aa20.41■□□□□ 0.86
NR4A1-216ENST00000550582 LY75O60449 1722 aa20.41■□□□□ 0.86
NR4A1-216ENST00000550582 MEGF6O75095 1541 aa20.4■□□□□ 0.86
NR4A1-216ENST00000550582 PUS7Q96PZ0 661 aaKnown RBP20.4■□□□□ 0.86
NR4A1-216ENST00000550582 RGPD2P0DJD1 1756 aa20.39■□□□□ 0.86
NR4A1-216ENST00000550582 SHANK3Q9BYB0 1731 aa20.39■□□□□ 0.86
NR4A1-216ENST00000550582 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.85
NR4A1-216ENST00000550582 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
NR4A1-216ENST00000550582 MSL1Q68DK7 614 aa20.37■□□□□ 0.85
NR4A1-216ENST00000550582 USP47Q96K76 1375 aa20.36■□□□□ 0.85
NR4A1-216ENST00000550582 NBPF6Q5VWK0 638 aa20.36■□□□□ 0.85
NR4A1-216ENST00000550582 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
NR4A1-216ENST00000550582 NBPF4Q96M43 638 aa20.36■□□□□ 0.85
NR4A1-216ENST00000550582 GRIN3BO60391 1043 aa20.35■□□□□ 0.85
NR4A1-216ENST00000550582 RRS1Q15050 365 aaKnown RBP20.35■□□□□ 0.85
NR4A1-216ENST00000550582 TESK2Q96S53 571 aa20.35■□□□□ 0.85
NR4A1-216ENST00000550582 ST20-MTHFSA0A0A6YYL1 179 aa20.33■□□□□ 0.85
NR4A1-216ENST00000550582 CEP350Q5VT06 3117 aa20.32■□□□□ 0.84
NR4A1-216ENST00000550582 RAPGEF4Q8WZA2 1011 aa20.31■□□□□ 0.84
NR4A1-216ENST00000550582 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
NR4A1-216ENST00000550582 GGNBP2Q9H3C7 697 aa20.3■□□□□ 0.84
NR4A1-216ENST00000550582 RTL1A6NKG5 1358 aa20.3■□□□□ 0.84
NR4A1-216ENST00000550582 CGNL1Q0VF96 1302 aa20.29■□□□□ 0.84
NR4A1-216ENST00000550582 FYB1O15117 783 aa20.29■□□□□ 0.84
NR4A1-216ENST00000550582 TATP17735 454 aaPredicted RBP20.29■□□□□ 0.84
NR4A1-216ENST00000550582 MPRIPQ6WCQ1 1025 aa20.28■□□□□ 0.84
NR4A1-216ENST00000550582 C5P01031 1676 aa20.28■□□□□ 0.84
NR4A1-216ENST00000550582 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
NR4A1-216ENST00000550582 HSP90AB2PQ58FF8 381 aa20.27■□□□□ 0.84
NR4A1-216ENST00000550582 CD2APQ9Y5K6 639 aa20.27■□□□□ 0.84
NR4A1-216ENST00000550582 PALLDQ8WX93 1383 aa20.26■□□□□ 0.83
NR4A1-216ENST00000550582 SMG6Q86US8 1419 aaKnown RBP20.26■□□□□ 0.83
NR4A1-216ENST00000550582 IFFO2Q5TF58 517 aa20.25■□□□□ 0.83
NR4A1-216ENST00000550582 SMIM5Q71RC9 77 aa20.25■□□□□ 0.83
NR4A1-216ENST00000550582 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
NR4A1-216ENST00000550582 PCDH11XQ9BZA7 1347 aa20.25■□□□□ 0.83
NR4A1-216ENST00000550582 PCDH11YQ9BZA8 1340 aa20.25■□□□□ 0.83
NR4A1-216ENST00000550582 CYP27B1O15528 508 aa20.24■□□□□ 0.83
NR4A1-216ENST00000550582 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
NR4A1-216ENST00000550582 WWC3Q9ULE0 1092 aa20.23■□□□□ 0.83
NR4A1-216ENST00000550582 TAF1LQ8IZX4 1826 aa20.23■□□□□ 0.83
NR4A1-216ENST00000550582 INSRP06213 1382 aa20.22■□□□□ 0.83
NR4A1-216ENST00000550582 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
NR4A1-216ENST00000550582 ZNF526Q8TF50 670 aaPredicted RBP20.22■□□□□ 0.83
NR4A1-216ENST00000550582 GPBP1L1Q9HC44 474 aaPredicted RBP20.22■□□□□ 0.83
NR4A1-216ENST00000550582 PHF14O94880 888 aa20.21■□□□□ 0.83
NR4A1-216ENST00000550582 AK7Q96M32 723 aa20.21■□□□□ 0.83
NR4A1-216ENST00000550582 C4BP0C0L5 1744 aa20.21■□□□□ 0.83
NR4A1-216ENST00000550582 TOGARAM1Q9Y4F4 1720 aa20.2■□□□□ 0.82
NR4A1-216ENST00000550582 FLT4P35916 1363 aa20.2■□□□□ 0.82
NR4A1-216ENST00000550582 HMGB2P26583 209 aaKnown RBP20.19■□□□□ 0.82
NR4A1-216ENST00000550582 PIGBQ92521 554 aa20.19■□□□□ 0.82
NR4A1-216ENST00000550582 SMARCC1Q92922 1105 aaPredicted RBP20.19■□□□□ 0.82
NR4A1-216ENST00000550582 ADCY9O60503 1353 aa20.19■□□□□ 0.82
NR4A1-216ENST00000550582 TMF1P82094 1093 aa20.18■□□□□ 0.82
NR4A1-216ENST00000550582 IGSF1Q8N6C5 1336 aa20.18■□□□□ 0.82
NR4A1-216ENST00000550582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.17■□□□□ 0.82
NR4A1-216ENST00000550582 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
NR4A1-216ENST00000550582 ITGB4P16144 1822 aa20.17■□□□□ 0.82
NR4A1-216ENST00000550582 LINC00116Q8NCU8 138 aa20.15■□□□□ 0.82
NR4A1-216ENST00000550582 KIF24Q5T7B8 1368 aa20.15■□□□□ 0.82
NR4A1-216ENST00000550582 KIF20BQ96Q89 1820 aa20.15■□□□□ 0.82
NR4A1-216ENST00000550582 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
NR4A1-216ENST00000550582 HSPA6P17066 643 aa20.14■□□□□ 0.81
NR4A1-216ENST00000550582 LOC102724428A0A0B4J2F2 783 aa20.13■□□□□ 0.81
NR4A1-216ENST00000550582 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
NR4A1-216ENST00000550582 SSFA2P28290 1259 aa20.13■□□□□ 0.81
NR4A1-216ENST00000550582 SIK1P57059 783 aa20.13■□□□□ 0.81
NR4A1-216ENST00000550582 NKX1-1Q15270 411 aaPredicted RBP20.13■□□□□ 0.81
NR4A1-216ENST00000550582 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
NR4A1-216ENST00000550582 PKD1L3Q7Z443 1732 aa20.13■□□□□ 0.81
NR4A1-216ENST00000550582 SPG7Q9UQ90 795 aa20.12■□□□□ 0.81
NR4A1-216ENST00000550582 NSD3Q9BZ95 1437 aa20.11■□□□□ 0.81
NR4A1-216ENST00000550582 ITPK1Q13572 414 aa20.11■□□□□ 0.81
NR4A1-216ENST00000550582 ASAP1Q9ULH1 1129 aa20.11■□□□□ 0.81
NR4A1-216ENST00000550582 MAP2P11137 1827 aaKnown RBP20.11■□□□□ 0.81
NR4A1-216ENST00000550582 GNPATO15228 680 aa20.1■□□□□ 0.81
NR4A1-216ENST00000550582 TMOD3Q9NYL9 352 aa20.1■□□□□ 0.81
NR4A1-216ENST00000550582 ATP6V1AP38606 617 aa20.09■□□□□ 0.81
NR4A1-216ENST00000550582 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
NR4A1-216ENST00000550582 EYA1Q99502 592 aa20.08■□□□□ 0.81
NR4A1-216ENST00000550582 KIF3CO14782 793 aa20.07■□□□□ 0.8
NR4A1-216ENST00000550582 CDCA8Q53HL2 280 aa20.07■□□□□ 0.8
NR4A1-216ENST00000550582 MMP10P09238 476 aa20.06■□□□□ 0.8
NR4A1-216ENST00000550582 ATG3Q9NT62 314 aa20.06■□□□□ 0.8
NR4A1-216ENST00000550582 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
NR4A1-216ENST00000550582 PHKG2P15735 406 aa20.05■□□□□ 0.8
NR4A1-216ENST00000550582 IFNL2Q8IZJ0 200 aa20.05■□□□□ 0.8
NR4A1-216ENST00000550582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms