RNA–Protein interactions for RNA: ENST00000550205.1

PXN-216, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-216ENST00000550205 ARXQ96QS3 562 aa13.64□□□□□ -0.23
PXN-216ENST00000550205 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
PXN-216ENST00000550205 USP47Q96K76 1375 aa13.63□□□□□ -0.23
PXN-216ENST00000550205 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
PXN-216ENST00000550205 COL24A1Q17RW2 1714 aa13.63□□□□□ -0.23
PXN-216ENST00000550205 DOT1LQ8TEK3 1739 aa13.63□□□□□ -0.23
PXN-216ENST00000550205 LY75O60449 1722 aa13.62□□□□□ -0.23
PXN-216ENST00000550205 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
PXN-216ENST00000550205 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
PXN-216ENST00000550205 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
PXN-216ENST00000550205 RGPD2P0DJD1 1756 aa13.62□□□□□ -0.23
PXN-216ENST00000550205 PNPLA7Q6ZV29 1317 aa13.62□□□□□ -0.23
PXN-216ENST00000550205 RRS1Q15050 365 aaKnown RBP13.61□□□□□ -0.23
PXN-216ENST00000550205 INSRP06213 1382 aa13.6□□□□□ -0.23
PXN-216ENST00000550205 CDCA8Q53HL2 280 aa13.6□□□□□ -0.23
PXN-216ENST00000550205 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
PXN-216ENST00000550205 SYTL4Q96C24 671 aaPredicted RBP13.6□□□□□ -0.23
PXN-216ENST00000550205 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
PXN-216ENST00000550205 FLT4P35916 1363 aa13.58□□□□□ -0.23
PXN-216ENST00000550205 ZNF784Q8NCA9 323 aaPredicted RBP13.58□□□□□ -0.24
PXN-216ENST00000550205 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.24
PXN-216ENST00000550205 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
PXN-216ENST00000550205 KIF20BQ96Q89 1820 aa13.57□□□□□ -0.24
PXN-216ENST00000550205 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
PXN-216ENST00000550205 POLD1P28340 1107 aa13.57□□□□□ -0.24
PXN-216ENST00000550205 KCNQ4P56696 695 aa13.57□□□□□ -0.24
PXN-216ENST00000550205 TRIM26Q12899 539 aaPredicted RBP13.57□□□□□ -0.24
PXN-216ENST00000550205 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
PXN-216ENST00000550205 RAPGEF4Q8WZA2 1011 aa13.57□□□□□ -0.24
PXN-216ENST00000550205 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
PXN-216ENST00000550205 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
PXN-216ENST00000550205 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
PXN-216ENST00000550205 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
PXN-216ENST00000550205 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
PXN-216ENST00000550205 TATP17735 454 aaPredicted RBP13.55□□□□□ -0.24
PXN-216ENST00000550205 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
PXN-216ENST00000550205 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
PXN-216ENST00000550205 NCAPD2Q15021 1401 aa13.55□□□□□ -0.24
PXN-216ENST00000550205 CHD4Q14839 1912 aa13.54□□□□□ -0.24
PXN-216ENST00000550205 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
PXN-216ENST00000550205 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
PXN-216ENST00000550205 NSD3Q9BZ95 1437 aa13.53□□□□□ -0.24
PXN-216ENST00000550205 C5P01031 1676 aa13.53□□□□□ -0.24
PXN-216ENST00000550205 PKD1L3Q7Z443 1732 aa13.53□□□□□ -0.24
PXN-216ENST00000550205 CYP27B1O15528 508 aa13.52□□□□□ -0.25
PXN-216ENST00000550205 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
PXN-216ENST00000550205 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
PXN-216ENST00000550205 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
PXN-216ENST00000550205 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
PXN-216ENST00000550205 GPR162Q16538 588 aa13.51□□□□□ -0.25
PXN-216ENST00000550205 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
PXN-216ENST00000550205 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
PXN-216ENST00000550205 NLGN2Q8NFZ4 835 aa13.5□□□□□ -0.25
PXN-216ENST00000550205 CLSPNQ9HAW4 1339 aa13.49□□□□□ -0.25
PXN-216ENST00000550205 TAF1LQ8IZX4 1826 aa13.49□□□□□ -0.25
PXN-216ENST00000550205 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
PXN-216ENST00000550205 FLAD1Q8NFF5 587 aa13.49□□□□□ -0.25
PXN-216ENST00000550205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.25
PXN-216ENST00000550205 PLEKHG2Q9H7P9 1386 aa13.48□□□□□ -0.25
PXN-216ENST00000550205 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
PXN-216ENST00000550205 ITGB4P16144 1822 aa13.48□□□□□ -0.25
PXN-216ENST00000550205 C4BP0C0L5 1744 aa13.47□□□□□ -0.25
PXN-216ENST00000550205 MSH5O43196 834 aa13.47□□□□□ -0.25
PXN-216ENST00000550205 PIGBQ92521 554 aa13.47□□□□□ -0.25
PXN-216ENST00000550205 SPG7Q9UQ90 795 aa13.47□□□□□ -0.25
PXN-216ENST00000550205 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
PXN-216ENST00000550205 GRIN3BO60391 1043 aa13.46□□□□□ -0.25
PXN-216ENST00000550205 EYA1Q99502 592 aa13.46□□□□□ -0.25
PXN-216ENST00000550205 POLKQ9UBT6 870 aa13.46□□□□□ -0.25
PXN-216ENST00000550205 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
PXN-216ENST00000550205 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
PXN-216ENST00000550205 C1QTNF8P60827 252 aa13.45□□□□□ -0.26
PXN-216ENST00000550205 AMIGO3Q86WK7 504 aa13.45□□□□□ -0.26
PXN-216ENST00000550205 MAP2P11137 1827 aaKnown RBP13.45□□□□□ -0.26
PXN-216ENST00000550205 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
PXN-216ENST00000550205 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
PXN-216ENST00000550205 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
PXN-216ENST00000550205 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
PXN-216ENST00000550205 PHKG2P15735 406 aa13.43□□□□□ -0.26
PXN-216ENST00000550205 SIK1P57059 783 aa13.43□□□□□ -0.26
PXN-216ENST00000550205 UBR3Q6ZT12 1888 aa13.43□□□□□ -0.26
PXN-216ENST00000550205 AK7Q96M32 723 aa13.43□□□□□ -0.26
PXN-216ENST00000550205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
PXN-216ENST00000550205 SSFA2P28290 1259 aa13.42□□□□□ -0.26
PXN-216ENST00000550205 EIF4A2Q14240 407 aaKnown RBP13.42□□□□□ -0.26
PXN-216ENST00000550205 IFNL2Q8IZJ0 200 aa13.42□□□□□ -0.26
PXN-216ENST00000550205 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
PXN-216ENST00000550205 LINC00116Q8NCU8 138 aa13.41□□□□□ -0.26
PXN-216ENST00000550205 IGSF1Q8N6C5 1336 aa13.4□□□□□ -0.26
PXN-216ENST00000550205 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
PXN-216ENST00000550205 ASAP1Q9ULH1 1129 aa13.4□□□□□ -0.26
PXN-216ENST00000550205 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
PXN-216ENST00000550205 PHF14O94880 888 aa13.39□□□□□ -0.27
PXN-216ENST00000550205 ITPK1Q13572 414 aa13.39□□□□□ -0.27
PXN-216ENST00000550205 ATG3Q9NT62 314 aa13.39□□□□□ -0.27
PXN-216ENST00000550205 KDRP35968 1356 aa13.39□□□□□ -0.27
PXN-216ENST00000550205 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
PXN-216ENST00000550205 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
PXN-216ENST00000550205 ATP6V1AP38606 617 aa13.38□□□□□ -0.27
PXN-216ENST00000550205 GNPATO15228 680 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms