RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 PELP1Q8IZL8 1130 aaKnown RBP16.32■□□□□ 0.2
CACNB3-214ENST00000550168 EYA1Q99502 592 aa16.32■□□□□ 0.2
CACNB3-214ENST00000550168 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
CACNB3-214ENST00000550168 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-214ENST00000550168 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
CACNB3-214ENST00000550168 GNAI1P63096 354 aa16.3■□□□□ 0.2
CACNB3-214ENST00000550168 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
CACNB3-214ENST00000550168 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
CACNB3-214ENST00000550168 ATRNO75882 1429 aa16.29■□□□□ 0.2
CACNB3-214ENST00000550168 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-214ENST00000550168 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-214ENST00000550168 UTRNP46939 3433 aa16.29■□□□□ 0.2
CACNB3-214ENST00000550168 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
CACNB3-214ENST00000550168 FAM208AQ9UK61 1670 aaKnown RBP16.28■□□□□ 0.2
CACNB3-214ENST00000550168 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
CACNB3-214ENST00000550168 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
CACNB3-214ENST00000550168 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
CACNB3-214ENST00000550168 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.2
CACNB3-214ENST00000550168 PRELPP51888 382 aa16.27■□□□□ 0.2
CACNB3-214ENST00000550168 BAG6P46379 1132 aa16.26■□□□□ 0.19
CACNB3-214ENST00000550168 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
CACNB3-214ENST00000550168 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
CACNB3-214ENST00000550168 ERBB3P21860 1342 aa16.25■□□□□ 0.19
CACNB3-214ENST00000550168 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
CACNB3-214ENST00000550168 ANKRD24Q8TF21 1146 aa16.25■□□□□ 0.19
CACNB3-214ENST00000550168 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
CACNB3-214ENST00000550168 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
CACNB3-214ENST00000550168 DDX17Q92841 729 aaKnown RBP16.24■□□□□ 0.19
CACNB3-214ENST00000550168 LRRC59Q96AG4 307 aaKnown RBP16.24■□□□□ 0.19
CACNB3-214ENST00000550168 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
CACNB3-214ENST00000550168 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
CACNB3-214ENST00000550168 MS4A1P11836 297 aa16.23■□□□□ 0.19
CACNB3-214ENST00000550168 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-214ENST00000550168 LMO7Q8WWI1 1683 aa16.23■□□□□ 0.19
CACNB3-214ENST00000550168 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
CACNB3-214ENST00000550168 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
CACNB3-214ENST00000550168 FNBP4Q8N3X1 1017 aaPredicted RBP16.22■□□□□ 0.19
CACNB3-214ENST00000550168 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
CACNB3-214ENST00000550168 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
CACNB3-214ENST00000550168 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
CACNB3-214ENST00000550168 AAMPQ13685 434 aa16.21■□□□□ 0.19
CACNB3-214ENST00000550168 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
CACNB3-214ENST00000550168 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-214ENST00000550168 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
CACNB3-214ENST00000550168 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
CACNB3-214ENST00000550168 CHD4Q14839 1912 aa16.21■□□□□ 0.19
CACNB3-214ENST00000550168 COL18A1P39060 1754 aa16.21■□□□□ 0.18
CACNB3-214ENST00000550168 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
CACNB3-214ENST00000550168 DLG5Q8TDM6 1919 aa16.2■□□□□ 0.18
CACNB3-214ENST00000550168 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
CACNB3-214ENST00000550168 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
CACNB3-214ENST00000550168 KIAA0232Q92628 1395 aa16.2■□□□□ 0.18
CACNB3-214ENST00000550168 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-214ENST00000550168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.19■□□□□ 0.18
CACNB3-214ENST00000550168 ABCA3Q99758 1704 aa16.19■□□□□ 0.18
CACNB3-214ENST00000550168 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-214ENST00000550168 BRPF1P55201 1214 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-214ENST00000550168 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-214ENST00000550168 EXOSC9Q06265 439 aaKnown RBP16.18■□□□□ 0.18
CACNB3-214ENST00000550168 PRDM11Q9NQV5 511 aa16.18■□□□□ 0.18
CACNB3-214ENST00000550168 LRRC37A3O60309 1634 aa16.18■□□□□ 0.18
CACNB3-214ENST00000550168 KIF16BQ96L93 1317 aa16.18■□□□□ 0.18
CACNB3-214ENST00000550168 CHL1O00533 1208 aa16.17■□□□□ 0.18
CACNB3-214ENST00000550168 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
CACNB3-214ENST00000550168 AKAP4Q5JQC9 854 aa16.17■□□□□ 0.18
CACNB3-214ENST00000550168 TSR2Q969E8 191 aaKnown RBP16.17■□□□□ 0.18
CACNB3-214ENST00000550168 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
CACNB3-214ENST00000550168 AXIN2Q9Y2T1 843 aa16.17■□□□□ 0.18
CACNB3-214ENST00000550168 CRB1P82279 1406 aa16.17■□□□□ 0.18
CACNB3-214ENST00000550168 CSB-PGBD3P0DP91 1061 aa16.16■□□□□ 0.18
CACNB3-214ENST00000550168 RAPGEF4Q8WZA2 1011 aa16.16■□□□□ 0.18
CACNB3-214ENST00000550168 GJD4Q96KN9 370 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-214ENST00000550168 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
CACNB3-214ENST00000550168 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
CACNB3-214ENST00000550168 C1orf141Q5JVX7 400 aa16.15■□□□□ 0.18
CACNB3-214ENST00000550168 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
CACNB3-214ENST00000550168 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
CACNB3-214ENST00000550168 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
CACNB3-214ENST00000550168 TATP17735 454 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-214ENST00000550168 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
CACNB3-214ENST00000550168 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
CACNB3-214ENST00000550168 FAM83GA6ND36 823 aa16.13■□□□□ 0.17
CACNB3-214ENST00000550168 BCAR3O75815 825 aa16.13■□□□□ 0.17
CACNB3-214ENST00000550168 ZKSCAN2Q63HK3 967 aa16.13■□□□□ 0.17
CACNB3-214ENST00000550168 MCM10Q7L590 875 aa16.13■□□□□ 0.17
CACNB3-214ENST00000550168 USHBP1Q8N6Y0 703 aa16.13■□□□□ 0.17
CACNB3-214ENST00000550168 THUMPD2Q9BTF0 503 aaKnown RBP16.13■□□□□ 0.17
CACNB3-214ENST00000550168 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
CACNB3-214ENST00000550168 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
CACNB3-214ENST00000550168 COL5A2P05997 1499 aaPredicted RBP16.13■□□□□ 0.17
CACNB3-214ENST00000550168 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
CACNB3-214ENST00000550168 EN1Q05925 392 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-214ENST00000550168 TWISTNBQ3B726 338 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-214ENST00000550168 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-214ENST00000550168 BRWD3Q6RI45 1802 aa16.12■□□□□ 0.17
CACNB3-214ENST00000550168 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
CACNB3-214ENST00000550168 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
CACNB3-214ENST00000550168 TAF7Q15545 349 aaPredicted RBP16.11■□□□□ 0.17
CACNB3-214ENST00000550168 COL13A1Q5TAT6 717 aaPredicted RBP16.11■□□□□ 0.17
CACNB3-214ENST00000550168 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms