RNA–Protein interactions for RNA: ENST00000550061.1

SLC11A2-220, Transcript of solute carrier family 11 member 2, humanhuman

TSL 3

Gene SLC11A2, Length 652 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A2-220ENST00000550061 MSH5O43196 834 aa12.63□□□□□ -0.39
SLC11A2-220ENST00000550061 APLP1P51693 650 aa12.63□□□□□ -0.39
SLC11A2-220ENST00000550061 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
SLC11A2-220ENST00000550061 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
SLC11A2-220ENST00000550061 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
SLC11A2-220ENST00000550061 MSL1Q68DK7 614 aa12.62□□□□□ -0.39
SLC11A2-220ENST00000550061 COL23A1Q86Y22 540 aaPredicted RBP12.62□□□□□ -0.39
SLC11A2-220ENST00000550061 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
SLC11A2-220ENST00000550061 KIF3CO14782 793 aa12.61□□□□□ -0.39
SLC11A2-220ENST00000550061 USP47Q96K76 1375 aa12.6□□□□□ -0.39
SLC11A2-220ENST00000550061 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
SLC11A2-220ENST00000550061 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
SLC11A2-220ENST00000550061 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
SLC11A2-220ENST00000550061 C4BP0C0L5 1744 aa12.59□□□□□ -0.39
SLC11A2-220ENST00000550061 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
SLC11A2-220ENST00000550061 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
SLC11A2-220ENST00000550061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
SLC11A2-220ENST00000550061 FLAD1Q8NFF5 587 aa12.58□□□□□ -0.4
SLC11A2-220ENST00000550061 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
SLC11A2-220ENST00000550061 HMGB2P26583 209 aaKnown RBP12.57□□□□□ -0.4
SLC11A2-220ENST00000550061 NME9Q86XW9 330 aa12.57□□□□□ -0.4
SLC11A2-220ENST00000550061 CD163L1Q9NR16 1453 aa12.57□□□□□ -0.4
SLC11A2-220ENST00000550061 MEGF6O75095 1541 aa12.57□□□□□ -0.4
SLC11A2-220ENST00000550061 KIF13BQ9NQT8 1826 aa12.56□□□□□ -0.4
SLC11A2-220ENST00000550061 TOMM70O94826 608 aa12.56□□□□□ -0.4
SLC11A2-220ENST00000550061 DNAJC5GQ8N7S2 189 aa12.56□□□□□ -0.4
SLC11A2-220ENST00000550061 EDC4Q6P2E9 1401 aaKnown RBP12.55□□□□□ -0.4
SLC11A2-220ENST00000550061 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
SLC11A2-220ENST00000550061 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
SLC11A2-220ENST00000550061 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
SLC11A2-220ENST00000550061 ITGB4P16144 1822 aa12.53□□□□□ -0.4
SLC11A2-220ENST00000550061 ZCRB1Q8TBF4 217 aaKnown RBP12.53□□□□□ -0.4
SLC11A2-220ENST00000550061 IP6K1Q92551 441 aa12.53□□□□□ -0.4
SLC11A2-220ENST00000550061 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
SLC11A2-220ENST00000550061 ROCK2O75116 1388 aaKnown RBP12.53□□□□□ -0.4
SLC11A2-220ENST00000550061 PALLDQ8WX93 1383 aa12.53□□□□□ -0.4
SLC11A2-220ENST00000550061 CAPN15O75808 1086 aa12.52□□□□□ -0.41
SLC11A2-220ENST00000550061 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
SLC11A2-220ENST00000550061 POTEDQ86YR6 584 aa12.52□□□□□ -0.41
SLC11A2-220ENST00000550061 BRCA1P38398 1863 aaKnown RBP12.52□□□□□ -0.41
SLC11A2-220ENST00000550061 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
SLC11A2-220ENST00000550061 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
SLC11A2-220ENST00000550061 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
SLC11A2-220ENST00000550061 KLRG1Q96E93 195 aa12.51□□□□□ -0.41
SLC11A2-220ENST00000550061 AK7Q96M32 723 aa12.51□□□□□ -0.41
SLC11A2-220ENST00000550061 TNS4Q8IZW8 715 aa12.5□□□□□ -0.41
SLC11A2-220ENST00000550061 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
SLC11A2-220ENST00000550061 CGNL1Q0VF96 1302 aa12.5□□□□□ -0.41
SLC11A2-220ENST00000550061 PXDNLA1KZ92 1463 aa12.5□□□□□ -0.41
SLC11A2-220ENST00000550061 MAP2P11137 1827 aaKnown RBP12.5□□□□□ -0.41
SLC11A2-220ENST00000550061 ARFGEF1Q9Y6D6 1849 aa12.49□□□□□ -0.41
SLC11A2-220ENST00000550061 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
SLC11A2-220ENST00000550061 A0A1W2PP64 1363 aa12.49□□□□□ -0.41
SLC11A2-220ENST00000550061 PRELPP51888 382 aa12.49□□□□□ -0.41
SLC11A2-220ENST00000550061 RBM46Q8TBY0 533 aaKnown RBP12.49□□□□□ -0.41
SLC11A2-220ENST00000550061 RTL1A6NKG5 1358 aa12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 MAP3K19Q56UN5 1328 aa12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 PCDH11XQ9BZA7 1347 aa12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 PCDH11YQ9BZA8 1340 aa12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 PHF14O94880 888 aa12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 HOXC9P31274 260 aa12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 NMRK2Q9NPI5 230 aa12.48□□□□□ -0.41
SLC11A2-220ENST00000550061 SMG6Q86US8 1419 aaKnown RBP12.47□□□□□ -0.41
SLC11A2-220ENST00000550061 SSFA2P28290 1259 aa12.47□□□□□ -0.41
SLC11A2-220ENST00000550061 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
SLC11A2-220ENST00000550061 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
SLC11A2-220ENST00000550061 AMPHP49418 695 aa12.46□□□□□ -0.41
SLC11A2-220ENST00000550061 FSTL1Q12841 308 aa12.46□□□□□ -0.41
SLC11A2-220ENST00000550061 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
SLC11A2-220ENST00000550061 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.41
SLC11A2-220ENST00000550061 SMARCC1Q92922 1105 aaPredicted RBP12.46□□□□□ -0.41
SLC11A2-220ENST00000550061 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.41
SLC11A2-220ENST00000550061 HTRA3P83110 453 aa12.45□□□□□ -0.42
SLC11A2-220ENST00000550061 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
SLC11A2-220ENST00000550061 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
SLC11A2-220ENST00000550061 L3MBTL2Q969R5 705 aa12.44□□□□□ -0.42
SLC11A2-220ENST00000550061 COG3Q96JB2 828 aa12.44□□□□□ -0.42
SLC11A2-220ENST00000550061 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
SLC11A2-220ENST00000550061 BCS1LQ9Y276 419 aa12.44□□□□□ -0.42
SLC11A2-220ENST00000550061 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
SLC11A2-220ENST00000550061 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
SLC11A2-220ENST00000550061 TGFB2P61812 414 aa12.43□□□□□ -0.42
SLC11A2-220ENST00000550061 KCPQ6ZWJ8 1503 aa12.42□□□□□ -0.42
SLC11A2-220ENST00000550061 MMP10P09238 476 aa12.42□□□□□ -0.42
SLC11A2-220ENST00000550061 NBPF6Q5VWK0 638 aa12.42□□□□□ -0.42
SLC11A2-220ENST00000550061 ARHGAP27Q6ZUM4 889 aa12.42□□□□□ -0.42
SLC11A2-220ENST00000550061 USHBP1Q8N6Y0 703 aa12.42□□□□□ -0.42
SLC11A2-220ENST00000550061 NBPF4Q96M43 638 aa12.42□□□□□ -0.42
SLC11A2-220ENST00000550061 SBF1O95248 1867 aa12.42□□□□□ -0.42
SLC11A2-220ENST00000550061 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
SLC11A2-220ENST00000550061 SMIM5Q71RC9 77 aa12.41□□□□□ -0.42
SLC11A2-220ENST00000550061 LOC102724428A0A0B4J2F2 783 aa12.4□□□□□ -0.42
SLC11A2-220ENST00000550061 GNPATO15228 680 aa12.4□□□□□ -0.42
SLC11A2-220ENST00000550061 SIK1P57059 783 aa12.4□□□□□ -0.42
SLC11A2-220ENST00000550061 LINC00116Q8NCU8 138 aa12.4□□□□□ -0.42
SLC11A2-220ENST00000550061 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
SLC11A2-220ENST00000550061 ZNF831Q5JPB2 1677 aa12.39□□□□□ -0.43
SLC11A2-220ENST00000550061 A0A0G2JLW4 131 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms