RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 CCDC116Q8IYX3 515 aa5.17□□□□□ -1.58
RAB5B-207ENST00000549915 THOC2Q8NI27 1593 aaKnown RBP5.16□□□□□ -1.58
RAB5B-207ENST00000549915 AKNAQ7Z591 1439 aa5.16□□□□□ -1.58
RAB5B-207ENST00000549915 CASKIN1Q8WXD9 1431 aa5.16□□□□□ -1.58
RAB5B-207ENST00000549915 CFTRP13569 1480 aa5.16□□□□□ -1.58
RAB5B-207ENST00000549915 NCAPD3P42695 1498 aa5.16□□□□□ -1.58
RAB5B-207ENST00000549915 CCDC18Q5T9S5 1454 aa5.16□□□□□ -1.58
RAB5B-207ENST00000549915 C11orf95C9JLR9 678 aaPredicted RBP5.16□□□□□ -1.58
RAB5B-207ENST00000549915 RNF20Q5VTR2 975 aa5.16□□□□□ -1.58
RAB5B-207ENST00000549915 TRIM47Q96LD4 638 aa5.16□□□□□ -1.58
RAB5B-207ENST00000549915 HMX1Q9NP08 348 aaPredicted RBP5.16□□□□□ -1.58
RAB5B-207ENST00000549915 HECW1Q76N89 1606 aa5.15□□□□□ -1.58
RAB5B-207ENST00000549915 ABCA5Q8WWZ7 1642 aa5.15□□□□□ -1.58
RAB5B-207ENST00000549915 CNTLNQ9NXG0 1405 aa5.15□□□□□ -1.58
RAB5B-207ENST00000549915 FGD5Q6ZNL6 1462 aa5.15□□□□□ -1.58
RAB5B-207ENST00000549915 TIMP2P16035 220 aa5.15□□□□□ -1.59
RAB5B-207ENST00000549915 WWC1Q8IX03 1113 aa5.15□□□□□ -1.59
RAB5B-207ENST00000549915 ADAM32Q8TC27 787 aa5.15□□□□□ -1.59
RAB5B-207ENST00000549915 KCTD15Q96SI1 283 aaPredicted RBP5.15□□□□□ -1.59
RAB5B-207ENST00000549915 TRIM34Q9BYJ4 488 aa5.15□□□□□ -1.59
RAB5B-207ENST00000549915 PTPN23Q9H3S7 1636 aa5.15□□□□□ -1.59
RAB5B-207ENST00000549915 FGD6Q6ZV73 1430 aa5.14□□□□□ -1.59
RAB5B-207ENST00000549915 KDM5BQ9UGL1 1544 aa5.14□□□□□ -1.59
RAB5B-207ENST00000549915 ZIC2O95409 532 aaPredicted RBP5.14□□□□□ -1.59
RAB5B-207ENST00000549915 DEKP35659 375 aaKnown RBP5.14□□□□□ -1.59
RAB5B-207ENST00000549915 GRM5P41594 1212 aa5.14□□□□□ -1.59
RAB5B-207ENST00000549915 HNRNPUQ00839 825 aaKnown RBP eCLIP5.14□□□□□ -1.59
RAB5B-207ENST00000549915 NR1H3Q13133 447 aa5.14□□□□□ -1.59
RAB5B-207ENST00000549915 FBXO31Q5XUX0 539 aaPredicted RBP5.14□□□□□ -1.59
RAB5B-207ENST00000549915 MRPL14Q6P1L8 145 aaKnown RBP5.14□□□□□ -1.59
RAB5B-207ENST00000549915 TSEN34Q9BSV6 310 aaKnown RBP5.14□□□□□ -1.59
RAB5B-207ENST00000549915 GMPR2Q9P2T1 348 aaKnown RBP5.14□□□□□ -1.59
RAB5B-207ENST00000549915 NOP58Q9Y2X3 529 aaKnown RBP5.14□□□□□ -1.59
RAB5B-207ENST00000549915 ZBED9Q6R2W3 1325 aa5.14□□□□□ -1.59
RAB5B-207ENST00000549915 CC2D2AQ9P2K1 1620 aa5.13□□□□□ -1.59
RAB5B-207ENST00000549915 KIF21AQ7Z4S6 1674 aa5.13□□□□□ -1.59
RAB5B-207ENST00000549915 GCC2Q8IWJ2 1684 aa5.13□□□□□ -1.59
RAB5B-207ENST00000549915 PRKCSHP14314 528 aaPredicted RBP5.13□□□□□ -1.59
RAB5B-207ENST00000549915 ITGAEP38570 1179 aa5.13□□□□□ -1.59
RAB5B-207ENST00000549915 NPAS3Q8IXF0 933 aa5.13□□□□□ -1.59
RAB5B-207ENST00000549915 MEIOBQ8N635 442 aa5.13□□□□□ -1.59
RAB5B-207ENST00000549915 GJD4Q96KN9 370 aaPredicted RBP5.13□□□□□ -1.59
RAB5B-207ENST00000549915 IGF1RP08069 1367 aa5.13□□□□□ -1.59
RAB5B-207ENST00000549915 FMN1Q68DA7 1419 aa5.13□□□□□ -1.59
RAB5B-207ENST00000549915 CUL7Q14999 1698 aa5.12□□□□□ -1.59
RAB5B-207ENST00000549915 POLR1AO95602 1720 aaPredicted RBP5.12□□□□□ -1.59
RAB5B-207ENST00000549915 FLIIQ13045 1269 aa5.12□□□□□ -1.59
RAB5B-207ENST00000549915 MTMR14Q8NCE2 650 aa5.12□□□□□ -1.59
RAB5B-207ENST00000549915 SIN3AQ96ST3 1273 aa5.12□□□□□ -1.59
RAB5B-207ENST00000549915 KLF16Q9BXK1 252 aaPredicted RBP5.12□□□□□ -1.59
RAB5B-207ENST00000549915 CARMIL1Q5VZK9 1371 aa5.12□□□□□ -1.59
RAB5B-207ENST00000549915 EHBP1L1Q8N3D4 1523 aa5.12□□□□□ -1.59
RAB5B-207ENST00000549915 ESPNB1AK53 854 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 NR3C2P08235 984 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 SOX11P35716 441 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 ANP32AP39687 249 aaKnown RBP5.11□□□□□ -1.59
RAB5B-207ENST00000549915 RANGAP1P46060 587 aaPredicted RBP5.11□□□□□ -1.59
RAB5B-207ENST00000549915 EIF4G2P78344 907 aaKnown RBP eCLIP5.11□□□□□ -1.59
RAB5B-207ENST00000549915 FAM50AQ14320 339 aaKnown RBP5.11□□□□□ -1.59
RAB5B-207ENST00000549915 TMEM132AQ24JP5 1023 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 WASHC4Q2M389 1173 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 INTS6LQ5JSJ4 861 aaKnown RBP5.11□□□□□ -1.59
RAB5B-207ENST00000549915 PPP1R26Q5T8A7 1209 aaPredicted RBP5.11□□□□□ -1.59
RAB5B-207ENST00000549915 LINC00528Q8N1L1 170 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 EPS8L1Q8TE68 723 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 SLC16A10Q8TF71 515 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 ITPKCQ96DU7 683 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 PCDHB9Q9Y5E1 797 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 NAIPQ13075 1403 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 NCOA1Q15788 1441 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 SMG6Q86US8 1419 aaKnown RBP5.11□□□□□ -1.59
RAB5B-207ENST00000549915 CTTNBP2Q8WZ74 1663 aa5.11□□□□□ -1.59
RAB5B-207ENST00000549915 FBXO45P0C2W1 286 aa5.1□□□□□ -1.59
RAB5B-207ENST00000549915 TCOF1Q13428 1488 aaKnown RBP5.1□□□□□ -1.59
RAB5B-207ENST00000549915 SNAPC4Q5SXM2 1469 aa5.1□□□□□ -1.59
RAB5B-207ENST00000549915 MYOM3Q5VTT5 1437 aa5.1□□□□□ -1.59
RAB5B-207ENST00000549915 RNF123Q5XPI4 1314 aa5.1□□□□□ -1.59
RAB5B-207ENST00000549915 Q6ZVU0 165 aa5.1□□□□□ -1.59
RAB5B-207ENST00000549915 TRIM46Q7Z4K8 759 aa5.1□□□□□ -1.59
RAB5B-207ENST00000549915 ESF1Q9H501 851 aaKnown RBP5.1□□□□□ -1.59
RAB5B-207ENST00000549915 USP35Q9P2H5 1018 aa5.1□□□□□ -1.59
RAB5B-207ENST00000549915 SUPT6HQ7KZ85 1726 aaKnown RBP5.09□□□□□ -1.59
RAB5B-207ENST00000549915 ARHGEF11O15085 1522 aa5.09□□□□□ -1.59
RAB5B-207ENST00000549915 BMP2P12643 396 aa5.09□□□□□ -1.59
RAB5B-207ENST00000549915 BMP1P13497 986 aa5.09□□□□□ -1.59
RAB5B-207ENST00000549915 ZFP42Q96MM3 310 aa5.09□□□□□ -1.59
RAB5B-207ENST00000549915 OCSTAMPQ9BR26 566 aa5.09□□□□□ -1.59
RAB5B-207ENST00000549915 ZFAND3Q9H8U3 227 aa5.09□□□□□ -1.59
RAB5B-207ENST00000549915 DACH1Q9UI36 760 aa5.09□□□□□ -1.59
RAB5B-207ENST00000549915 SAMD9Q5K651 1589 aa5.08□□□□□ -1.6
RAB5B-207ENST00000549915 MIA2Q96PC5 1412 aa5.08□□□□□ -1.6
RAB5B-207ENST00000549915 CCDC7Q96M83 1385 aa5.08□□□□□ -1.6
RAB5B-207ENST00000549915 WASHC2AQ641Q2 1341 aa5.08□□□□□ -1.6
RAB5B-207ENST00000549915 RAD21O60216 631 aa5.08□□□□□ -1.6
RAB5B-207ENST00000549915 MAN1A2O60476 641 aa5.08□□□□□ -1.6
RAB5B-207ENST00000549915 IPO9Q96P70 1041 aaKnown RBP5.08□□□□□ -1.6
RAB5B-207ENST00000549915 PURBQ96QR8 312 aaKnown RBP5.08□□□□□ -1.6
RAB5B-207ENST00000549915 SNRKQ9NRH2 765 aa5.08□□□□□ -1.6
RAB5B-207ENST00000549915 ABCA10Q8WWZ4 1543 aa5.07□□□□□ -1.6
RAB5B-207ENST00000549915 UGGT2Q9NYU1 1516 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms