RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 BMP1P13497 986 aa7.58□□□□□ -1.2
CPNE8-206ENST00000549842 KDF1Q8NAX2 398 aaPredicted RBP7.58□□□□□ -1.2
CPNE8-206ENST00000549842 ADAMTS19Q8TE59 1207 aa7.58□□□□□ -1.2
CPNE8-206ENST00000549842 SIRT1Q96EB6 747 aa7.58□□□□□ -1.2
CPNE8-206ENST00000549842 TRAIPQ9BWF2 469 aa7.58□□□□□ -1.2
CPNE8-206ENST00000549842 PTGIRP43119 386 aa7.57□□□□□ -1.2
CPNE8-206ENST00000549842 USP4Q13107 963 aa7.57□□□□□ -1.2
CPNE8-206ENST00000549842 HDGFL1Q5TGJ6 251 aa7.57□□□□□ -1.2
CPNE8-206ENST00000549842 CYLDQ9NQC7 956 aa7.57□□□□□ -1.2
CPNE8-206ENST00000549842 BMP2P12643 396 aa7.56□□□□□ -1.2
CPNE8-206ENST00000549842 PURBQ96QR8 312 aaKnown RBP7.56□□□□□ -1.2
CPNE8-206ENST00000549842 OSBPL3Q9H4L5 887 aa7.56□□□□□ -1.2
CPNE8-206ENST00000549842 DOLKQ9UPQ8 538 aa7.56□□□□□ -1.2
CPNE8-206ENST00000549842 MYCP01106 439 aaPredicted RBP7.55□□□□□ -1.2
CPNE8-206ENST00000549842 TSGA10IPQ3SY00 556 aa7.55□□□□□ -1.2
CPNE8-206ENST00000549842 CYP2U1Q7Z449 544 aa7.55□□□□□ -1.2
CPNE8-206ENST00000549842 KCTD17Q8N5Z5 321 aa7.55□□□□□ -1.2
CPNE8-206ENST00000549842 PLPP7Q8NBV4 271 aa7.55□□□□□ -1.2
CPNE8-206ENST00000549842 CDCA7Q9BWT1 371 aaPredicted RBP7.55□□□□□ -1.2
CPNE8-206ENST00000549842 CCDC9Q9Y3X0 531 aaKnown RBP7.55□□□□□ -1.2
CPNE8-206ENST00000549842 SOS2Q07890 1332 aaPredicted RBP7.54□□□□□ -1.2
CPNE8-206ENST00000549842 ATP5J2-PTCD1G3V325 749 aa7.54□□□□□ -1.2
CPNE8-206ENST00000549842 GNRH1P01148 92 aa7.54□□□□□ -1.2
CPNE8-206ENST00000549842 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
CPNE8-206ENST00000549842 SCTRP47872 440 aa7.54□□□□□ -1.2
CPNE8-206ENST00000549842 ESF1Q9H501 851 aaKnown RBP7.54□□□□□ -1.2
CPNE8-206ENST00000549842 GPC1P35052 558 aa7.53□□□□□ -1.2
CPNE8-206ENST00000549842 RELBQ01201 579 aa7.53□□□□□ -1.2
CPNE8-206ENST00000549842 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
CPNE8-206ENST00000549842 NPM2Q86SE8 214 aaKnown RBP7.53□□□□□ -1.2
CPNE8-206ENST00000549842 GLMNQ92990 594 aa7.53□□□□□ -1.2
CPNE8-206ENST00000549842 AGBL1Q96MI9 1066 aa7.53□□□□□ -1.2
CPNE8-206ENST00000549842 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
CPNE8-206ENST00000549842 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.21
CPNE8-206ENST00000549842 PLEKHM2Q8IWE5 1019 aa7.52□□□□□ -1.21
CPNE8-206ENST00000549842 TTLL8A6PVC2 850 aa7.51□□□□□ -1.21
CPNE8-206ENST00000549842 SKIP12755 728 aa7.51□□□□□ -1.21
CPNE8-206ENST00000549842 RNF144AP50876 292 aaPredicted RBP7.51□□□□□ -1.21
CPNE8-206ENST00000549842 CALR3Q96L12 384 aaKnown RBP7.51□□□□□ -1.21
CPNE8-206ENST00000549842 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
CPNE8-206ENST00000549842 ACIN1Q9UKV3 1341 aaKnown RBP7.51□□□□□ -1.21
CPNE8-206ENST00000549842 A0A1W2PRU2 124 aa7.5□□□□□ -1.21
CPNE8-206ENST00000549842 ATP9BO43861 1147 aa7.5□□□□□ -1.21
CPNE8-206ENST00000549842 PDE4CQ08493 712 aa7.5□□□□□ -1.21
CPNE8-206ENST00000549842 CLN3Q13286 438 aa7.5□□□□□ -1.21
CPNE8-206ENST00000549842 EML3Q32P44 896 aa7.5□□□□□ -1.21
CPNE8-206ENST00000549842 NPAS3Q8IXF0 933 aa7.5□□□□□ -1.21
CPNE8-206ENST00000549842 XAGE2Q96GT9 111 aa7.5□□□□□ -1.21
CPNE8-206ENST00000549842 WASLO00401 505 aaPredicted RBP7.49□□□□□ -1.21
CPNE8-206ENST00000549842 MAN1A2O60476 641 aa7.49□□□□□ -1.21
CPNE8-206ENST00000549842 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.49□□□□□ -1.21
CPNE8-206ENST00000549842 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
CPNE8-206ENST00000549842 INSM2Q96T92 566 aaPredicted RBP7.49□□□□□ -1.21
CPNE8-206ENST00000549842 ZNF395Q9H8N7 513 aaPredicted RBP7.49□□□□□ -1.21
CPNE8-206ENST00000549842 USP17L5A8MUK1 530 aa7.48□□□□□ -1.21
CPNE8-206ENST00000549842 CTSOP43234 321 aaPredicted RBP7.48□□□□□ -1.21
CPNE8-206ENST00000549842 ESCO1Q5FWF5 840 aa7.48□□□□□ -1.21
CPNE8-206ENST00000549842 TBC1D9Q6ZT07 1266 aa7.48□□□□□ -1.21
CPNE8-206ENST00000549842 ESYT1Q9BSJ8 1104 aa7.48□□□□□ -1.21
CPNE8-206ENST00000549842 DNMT3LQ9UJW3 386 aa7.48□□□□□ -1.21
CPNE8-206ENST00000549842 NOD1Q9Y239 953 aa7.48□□□□□ -1.21
CPNE8-206ENST00000549842 HRH3Q9Y5N1 445 aa7.48□□□□□ -1.21
CPNE8-206ENST00000549842 NCOA4Q13772 614 aa7.47□□□□□ -1.21
CPNE8-206ENST00000549842 FOXD4L5Q5VV16 416 aaPredicted RBP7.47□□□□□ -1.21
CPNE8-206ENST00000549842 TRIM50Q86XT4 487 aa7.47□□□□□ -1.21
CPNE8-206ENST00000549842 RNF217Q8TC41 542 aa7.47□□□□□ -1.21
CPNE8-206ENST00000549842 PPP1R12CQ9BZL4 782 aa7.47□□□□□ -1.21
CPNE8-206ENST00000549842 GRIP2Q9C0E4 1043 aa7.47□□□□□ -1.21
CPNE8-206ENST00000549842 PCDHGA11Q9Y5H2 935 aa7.47□□□□□ -1.21
CPNE8-206ENST00000549842 WDR44Q5JSH3 913 aa7.46□□□□□ -1.22
CPNE8-206ENST00000549842 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
CPNE8-206ENST00000549842 RETREG2Q8NC44 543 aa7.46□□□□□ -1.22
CPNE8-206ENST00000549842 NLRP3Q96P20 1036 aa7.46□□□□□ -1.22
CPNE8-206ENST00000549842 POLMQ9NP87 494 aaPredicted RBP7.46□□□□□ -1.22
CPNE8-206ENST00000549842 TFIP11Q9UBB9 837 aaKnown RBP7.46□□□□□ -1.22
CPNE8-206ENST00000549842 USP17L3A6NCW0 530 aa7.45□□□□□ -1.22
CPNE8-206ENST00000549842 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
CPNE8-206ENST00000549842 PALM3A6NDB9 673 aaPredicted RBP7.45□□□□□ -1.22
CPNE8-206ENST00000549842 IL2RAP01589 272 aa7.45□□□□□ -1.22
CPNE8-206ENST00000549842 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
CPNE8-206ENST00000549842 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
CPNE8-206ENST00000549842 CNKSR1Q969H4 720 aa7.45□□□□□ -1.22
CPNE8-206ENST00000549842 ZNF775Q96BV0 537 aaPredicted RBP7.45□□□□□ -1.22
CPNE8-206ENST00000549842 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
CPNE8-206ENST00000549842 NXF1Q9UBU9 619 aaKnown RBP7.45□□□□□ -1.22
CPNE8-206ENST00000549842 MAFBQ9Y5Q3 323 aaPredicted RBP7.45□□□□□ -1.22
CPNE8-206ENST00000549842 SPATA31C2B4DYI2 1134 aa7.44□□□□□ -1.22
CPNE8-206ENST00000549842 MEN1O00255 615 aa7.44□□□□□ -1.22
CPNE8-206ENST00000549842 TERTO14746 1132 aaKnown RBP7.44□□□□□ -1.22
CPNE8-206ENST00000549842 INHAP05111 366 aa7.44□□□□□ -1.22
CPNE8-206ENST00000549842 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
CPNE8-206ENST00000549842 SCNN1DP51172 638 aa7.44□□□□□ -1.22
CPNE8-206ENST00000549842 LYSMD3Q7Z3D4 306 aa7.44□□□□□ -1.22
CPNE8-206ENST00000549842 SLC4A9Q96Q91 983 aa7.44□□□□□ -1.22
CPNE8-206ENST00000549842 FIGNL2A6NMB9 653 aa7.43□□□□□ -1.22
CPNE8-206ENST00000549842 GTF2IP78347 998 aa7.43□□□□□ -1.22
CPNE8-206ENST00000549842 CENPCQ03188 943 aa7.43□□□□□ -1.22
CPNE8-206ENST00000549842 FHDC1Q9C0D6 1143 aaPredicted RBP7.43□□□□□ -1.22
CPNE8-206ENST00000549842 ETNK1Q9HBU6 452 aa7.43□□□□□ -1.22
CPNE8-206ENST00000549842 SLC35F4A4IF30 521 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms