RNA–Protein interactions for RNA: ENST00000549784.5

CALCOCO1-216, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-216ENST00000549784 MEGF6O75095 1541 aa13.6□□□□□ -0.23
CALCOCO1-216ENST00000549784 GPR162Q16538 588 aa13.6□□□□□ -0.23
CALCOCO1-216ENST00000549784 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
CALCOCO1-216ENST00000549784 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
CALCOCO1-216ENST00000549784 TFCP2L1Q9NZI6 479 aa13.6□□□□□ -0.23
CALCOCO1-216ENST00000549784 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-216ENST00000549784 RRS1Q15050 365 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-216ENST00000549784 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
CALCOCO1-216ENST00000549784 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
CALCOCO1-216ENST00000549784 COG3Q96JB2 828 aa13.59□□□□□ -0.23
CALCOCO1-216ENST00000549784 AMPHP49418 695 aa13.58□□□□□ -0.24
CALCOCO1-216ENST00000549784 C1QTNF8P60827 252 aa13.58□□□□□ -0.24
CALCOCO1-216ENST00000549784 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-216ENST00000549784 SENP3-EIF4A1A0A087X0R7 540 aa13.57□□□□□ -0.24
CALCOCO1-216ENST00000549784 POLD1P28340 1107 aa13.57□□□□□ -0.24
CALCOCO1-216ENST00000549784 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO1-216ENST00000549784 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
CALCOCO1-216ENST00000549784 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO1-216ENST00000549784 SHANK3Q9BYB0 1731 aa13.56□□□□□ -0.24
CALCOCO1-216ENST00000549784 FYB1O15117 783 aa13.56□□□□□ -0.24
CALCOCO1-216ENST00000549784 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
CALCOCO1-216ENST00000549784 GGNBP2Q9H3C7 697 aa13.56□□□□□ -0.24
CALCOCO1-216ENST00000549784 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
CALCOCO1-216ENST00000549784 DOT1LQ8TEK3 1739 aa13.56□□□□□ -0.24
CALCOCO1-216ENST00000549784 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
CALCOCO1-216ENST00000549784 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
CALCOCO1-216ENST00000549784 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
CALCOCO1-216ENST00000549784 MSL1Q68DK7 614 aa13.54□□□□□ -0.24
CALCOCO1-216ENST00000549784 LY75O60449 1722 aa13.53□□□□□ -0.24
CALCOCO1-216ENST00000549784 QSER1Q2KHR3 1735 aa13.53□□□□□ -0.24
CALCOCO1-216ENST00000549784 MSH5O43196 834 aa13.53□□□□□ -0.24
CALCOCO1-216ENST00000549784 HSP90AB2PQ58FF8 381 aa13.53□□□□□ -0.24
CALCOCO1-216ENST00000549784 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
CALCOCO1-216ENST00000549784 AMIGO3Q86WK7 504 aa13.53□□□□□ -0.24
CALCOCO1-216ENST00000549784 USP47Q96K76 1375 aa13.52□□□□□ -0.25
CALCOCO1-216ENST00000549784 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
CALCOCO1-216ENST00000549784 CHD4Q14839 1912 aa13.51□□□□□ -0.25
CALCOCO1-216ENST00000549784 RTL1A6NKG5 1358 aa13.51□□□□□ -0.25
CALCOCO1-216ENST00000549784 CYP27B1O15528 508 aa13.51□□□□□ -0.25
CALCOCO1-216ENST00000549784 GIGYF1O75420 1035 aaPredicted RBP13.49□□□□□ -0.25
CALCOCO1-216ENST00000549784 TATP17735 454 aaPredicted RBP13.49□□□□□ -0.25
CALCOCO1-216ENST00000549784 MPRIPQ6WCQ1 1025 aa13.49□□□□□ -0.25
CALCOCO1-216ENST00000549784 RAPGEF4Q8WZA2 1011 aa13.49□□□□□ -0.25
CALCOCO1-216ENST00000549784 INSRP06213 1382 aa13.48□□□□□ -0.25
CALCOCO1-216ENST00000549784 PALLDQ8WX93 1383 aa13.48□□□□□ -0.25
CALCOCO1-216ENST00000549784 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
CALCOCO1-216ENST00000549784 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
CALCOCO1-216ENST00000549784 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
CALCOCO1-216ENST00000549784 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
CALCOCO1-216ENST00000549784 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
CALCOCO1-216ENST00000549784 TMF1P82094 1093 aa13.46□□□□□ -0.25
CALCOCO1-216ENST00000549784 PIGBQ92521 554 aa13.46□□□□□ -0.25
CALCOCO1-216ENST00000549784 GRIN3BO60391 1043 aa13.45□□□□□ -0.26
CALCOCO1-216ENST00000549784 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
CALCOCO1-216ENST00000549784 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-216ENST00000549784 FLT4P35916 1363 aa13.45□□□□□ -0.26
CALCOCO1-216ENST00000549784 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
CALCOCO1-216ENST00000549784 C5P01031 1676 aa13.44□□□□□ -0.26
CALCOCO1-216ENST00000549784 PHF14O94880 888 aa13.44□□□□□ -0.26
CALCOCO1-216ENST00000549784 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
CALCOCO1-216ENST00000549784 CD2APQ9Y5K6 639 aa13.44□□□□□ -0.26
CALCOCO1-216ENST00000549784 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
CALCOCO1-216ENST00000549784 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
CALCOCO1-216ENST00000549784 LINC00116Q8NCU8 138 aa13.43□□□□□ -0.26
CALCOCO1-216ENST00000549784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
CALCOCO1-216ENST00000549784 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
CALCOCO1-216ENST00000549784 GOLGB1Q14789 3259 aaKnown RBP13.42□□□□□ -0.26
CALCOCO1-216ENST00000549784 NCAPD2Q15021 1401 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 NSD3Q9BZ95 1437 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 PPM1GO15355 546 aaPredicted RBP13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 ITPK1Q13572 414 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 FLAD1Q8NFF5 587 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 AK7Q96M32 723 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 EYA1Q99502 592 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 KIF24Q5T7B8 1368 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 C4BP0C0L5 1744 aa13.41□□□□□ -0.26
CALCOCO1-216ENST00000549784 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.26
CALCOCO1-216ENST00000549784 SIK1P57059 783 aa13.4□□□□□ -0.26
CALCOCO1-216ENST00000549784 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
CALCOCO1-216ENST00000549784 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
CALCOCO1-216ENST00000549784 ADCY9O60503 1353 aa13.4□□□□□ -0.26
CALCOCO1-216ENST00000549784 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
CALCOCO1-216ENST00000549784 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO1-216ENST00000549784 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
CALCOCO1-216ENST00000549784 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
CALCOCO1-216ENST00000549784 ITGB4P16144 1822 aa13.38□□□□□ -0.27
CALCOCO1-216ENST00000549784 KIF20BQ96Q89 1820 aa13.38□□□□□ -0.27
CALCOCO1-216ENST00000549784 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
CALCOCO1-216ENST00000549784 MAP2P11137 1827 aaKnown RBP13.37□□□□□ -0.27
CALCOCO1-216ENST00000549784 PHKG2P15735 406 aa13.37□□□□□ -0.27
CALCOCO1-216ENST00000549784 SSFA2P28290 1259 aa13.37□□□□□ -0.27
CALCOCO1-216ENST00000549784 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
CALCOCO1-216ENST00000549784 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
CALCOCO1-216ENST00000549784 ATG3Q9NT62 314 aa13.37□□□□□ -0.27
CALCOCO1-216ENST00000549784 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
CALCOCO1-216ENST00000549784 UBR3Q6ZT12 1888 aa13.36□□□□□ -0.27
CALCOCO1-216ENST00000549784 GNPATO15228 680 aa13.36□□□□□ -0.27
CALCOCO1-216ENST00000549784 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-216ENST00000549784 ATP6V1AP38606 617 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms