RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 SCAPERQ9BY12 1400 aa8.33□□□□□ -1.08
SMARCC2-207ENST00000549757 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
SMARCC2-207ENST00000549757 MYO5CQ9NQX4 1742 aa8.32□□□□□ -1.08
SMARCC2-207ENST00000549757 WNT7AO00755 349 aa8.32□□□□□ -1.08
SMARCC2-207ENST00000549757 LCE2BO14633 110 aa8.32□□□□□ -1.08
SMARCC2-207ENST00000549757 WNT7BP56706 349 aa8.32□□□□□ -1.08
SMARCC2-207ENST00000549757 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
SMARCC2-207ENST00000549757 FOXC1Q12948 553 aa8.32□□□□□ -1.08
SMARCC2-207ENST00000549757 SIGLEC1Q9BZZ2 1709 aa8.32□□□□□ -1.08
SMARCC2-207ENST00000549757 PLCH2O75038 1416 aa8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 C9orf84Q5VXU9 1444 aa8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 FMN1Q68DA7 1419 aa8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 HSP90B1P14625 803 aaKnown RBP8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 SH3BP2P78314 561 aa8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 PCMTD1Q96MG8 357 aaPredicted RBP8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 TOR4AQ9NXH8 423 aa8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 CDK11AQ9UQ88 783 aaPredicted RBP8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 KIF14Q15058 1648 aa8.31□□□□□ -1.08
SMARCC2-207ENST00000549757 ARHGAP5Q13017 1502 aa8.3□□□□□ -1.08
SMARCC2-207ENST00000549757 CTHP32929 405 aa8.3□□□□□ -1.08
SMARCC2-207ENST00000549757 RFC5P40937 340 aa8.3□□□□□ -1.08
SMARCC2-207ENST00000549757 EFCAB2Q5VUJ9 269 aa8.3□□□□□ -1.08
SMARCC2-207ENST00000549757 ATP10AO60312 1499 aa8.3□□□□□ -1.08
SMARCC2-207ENST00000549757 CLIP1P30622 1438 aa8.29□□□□□ -1.08
SMARCC2-207ENST00000549757 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
SMARCC2-207ENST00000549757 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
SMARCC2-207ENST00000549757 BAP1Q92560 729 aa8.29□□□□□ -1.08
SMARCC2-207ENST00000549757 MRGPRX2Q96LB1 330 aa8.29□□□□□ -1.08
SMARCC2-207ENST00000549757 MTMR7Q9Y216 660 aa8.29□□□□□ -1.08
SMARCC2-207ENST00000549757 PREX1Q8TCU6 1659 aa8.29□□□□□ -1.08
SMARCC2-207ENST00000549757 ARHGEF12Q9NZN5 1544 aa8.29□□□□□ -1.08
SMARCC2-207ENST00000549757 ZNF518AQ6AHZ1 1483 aa8.28□□□□□ -1.08
SMARCC2-207ENST00000549757 Q6ZNB5 142 aa8.28□□□□□ -1.08
SMARCC2-207ENST00000549757 ZNF511Q8NB15 262 aa8.28□□□□□ -1.08
SMARCC2-207ENST00000549757 FLIIQ13045 1269 aa8.27□□□□□ -1.09
SMARCC2-207ENST00000549757 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
SMARCC2-207ENST00000549757 PUS7Q96PZ0 661 aaKnown RBP8.27□□□□□ -1.09
SMARCC2-207ENST00000549757 ESF1Q9H501 851 aaKnown RBP8.27□□□□□ -1.09
SMARCC2-207ENST00000549757 TROQ12816 1431 aaPredicted RBP8.27□□□□□ -1.09
SMARCC2-207ENST00000549757 UHRF1BP1Q6BDS2 1440 aa8.27□□□□□ -1.09
SMARCC2-207ENST00000549757 ARHGAP35Q9NRY4 1499 aa8.26□□□□□ -1.09
SMARCC2-207ENST00000549757 SIAH2O43255 324 aa8.26□□□□□ -1.09
SMARCC2-207ENST00000549757 CEBPAP49715 358 aaPredicted RBP8.26□□□□□ -1.09
SMARCC2-207ENST00000549757 AP1G2O75843 785 aa8.25□□□□□ -1.09
SMARCC2-207ENST00000549757 DGAT1O75907 488 aa8.25□□□□□ -1.09
SMARCC2-207ENST00000549757 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
SMARCC2-207ENST00000549757 TMCO4Q5TGY1 634 aa8.25□□□□□ -1.09
SMARCC2-207ENST00000549757 HMX1Q9NP08 348 aaPredicted RBP8.25□□□□□ -1.09
SMARCC2-207ENST00000549757 KDM5CP41229 1560 aa8.24□□□□□ -1.09
SMARCC2-207ENST00000549757 DIP2CQ9Y2E4 1556 aa8.24□□□□□ -1.09
SMARCC2-207ENST00000549757 A6NJR5 290 aa8.24□□□□□ -1.09
SMARCC2-207ENST00000549757 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
SMARCC2-207ENST00000549757 AFAP1Q8N556 730 aa8.24□□□□□ -1.09
SMARCC2-207ENST00000549757 SNIP1Q8TAD8 396 aaKnown RBP8.24□□□□□ -1.09
SMARCC2-207ENST00000549757 ABCA6Q8N139 1617 aa8.23□□□□□ -1.09
SMARCC2-207ENST00000549757 FAM187AA6NFU0 413 aa8.23□□□□□ -1.09
SMARCC2-207ENST00000549757 TRAK2O60296 914 aa8.23□□□□□ -1.09
SMARCC2-207ENST00000549757 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
SMARCC2-207ENST00000549757 TRAF7Q6Q0C0 670 aa8.23□□□□□ -1.09
SMARCC2-207ENST00000549757 EHBP1Q8NDI1 1231 aa8.23□□□□□ -1.09
SMARCC2-207ENST00000549757 FOXJ1Q92949 421 aa8.23□□□□□ -1.09
SMARCC2-207ENST00000549757 PREX2Q70Z35 1606 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 AVPP01185 164 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 SMPD1P17405 629 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 RBM25P49756 843 aaKnown RBP8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 MFAP1P55081 439 aaKnown RBP8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 NR6A1Q15406 480 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 PKDCCQ504Y2 493 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 SH3RF1Q7Z6J0 888 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 AEBP1Q8IUX7 1158 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 ZNF428Q96B54 188 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 LRRIQ1Q96JM4 1722 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 CDC42BPBQ9Y5S2 1711 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 REREQ9P2R6 1566 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 DISP3Q9P2K9 1392 aa8.22□□□□□ -1.09
SMARCC2-207ENST00000549757 C3P01024 1663 aa8.21□□□□□ -1.09
SMARCC2-207ENST00000549757 ITSN2Q9NZM3 1697 aa8.21□□□□□ -1.09
SMARCC2-207ENST00000549757 CCDC18Q5T9S5 1454 aa8.21□□□□□ -1.09
SMARCC2-207ENST00000549757 ABCC1P33527 1531 aa8.21□□□□□ -1.1
SMARCC2-207ENST00000549757 TTC24A2A3L6 582 aaPredicted RBP8.21□□□□□ -1.1
SMARCC2-207ENST00000549757 J3QL48 77 aa8.21□□□□□ -1.1
SMARCC2-207ENST00000549757 VARSP26640 1264 aaKnown RBP8.21□□□□□ -1.1
SMARCC2-207ENST00000549757 FOXD4L5Q5VV16 416 aaPredicted RBP8.21□□□□□ -1.1
SMARCC2-207ENST00000549757 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
SMARCC2-207ENST00000549757 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.1
SMARCC2-207ENST00000549757 MLH3Q9UHC1 1453 aa8.2□□□□□ -1.1
SMARCC2-207ENST00000549757 STRCQ7RTU9 1775 aa8.2□□□□□ -1.1
SMARCC2-207ENST00000549757 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
SMARCC2-207ENST00000549757 GPKOWQ92917 476 aaPredicted RBP eCLIP8.2□□□□□ -1.1
SMARCC2-207ENST00000549757 TRIM34Q9BYJ4 488 aa8.2□□□□□ -1.1
SMARCC2-207ENST00000549757 ZNF777Q9ULD5 760 aaPredicted RBP8.2□□□□□ -1.1
SMARCC2-207ENST00000549757 TRAPPC8Q9Y2L5 1435 aa8.2□□□□□ -1.1
SMARCC2-207ENST00000549757 NBPF14Q5TI25 921 aa8.19□□□□□ -1.1
SMARCC2-207ENST00000549757 MPNDQ8N594 471 aa8.19□□□□□ -1.1
SMARCC2-207ENST00000549757 GJD4Q96KN9 370 aaPredicted RBP8.19□□□□□ -1.1
SMARCC2-207ENST00000549757 C1QTNF2Q9BXJ5 285 aa8.19□□□□□ -1.1
SMARCC2-207ENST00000549757 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms