RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 TATP17735 454 aaPredicted RBP33.21■■■□□ 2.91
USP44-205ENST00000549639 NSD2O96028 1365 aa33.21■■■□□ 2.91
USP44-205ENST00000549639 USHBP1Q8N6Y0 703 aa33.2■■■□□ 2.91
USP44-205ENST00000549639 KAT6BQ8WYB5 2073 aa33.2■■■□□ 2.91
USP44-205ENST00000549639 BTAF1O14981 1849 aa33.19■■■□□ 2.9
USP44-205ENST00000549639 PPM1GO15355 546 aaPredicted RBP33.19■■■□□ 2.9
USP44-205ENST00000549639 ANO8Q9HCE9 1232 aaPredicted RBP33.19■■■□□ 2.9
USP44-205ENST00000549639 STK32BQ9NY57 414 aa33.18■■■□□ 2.9
USP44-205ENST00000549639 MAP2P11137 1827 aaKnown RBP33.17■■■□□ 2.9
USP44-205ENST00000549639 POLKQ9UBT6 870 aa33.17■■■□□ 2.9
USP44-205ENST00000549639 SPON1Q9HCB6 807 aa33.16■■■□□ 2.9
USP44-205ENST00000549639 SHANK3Q9BYB0 1731 aa33.16■■■□□ 2.9
USP44-205ENST00000549639 SLC15A2Q16348 729 aa33.14■■■□□ 2.9
USP44-205ENST00000549639 NCAPD2Q15021 1401 aa33.13■■■□□ 2.89
USP44-205ENST00000549639 PCDH11XQ9BZA7 1347 aa33.13■■■□□ 2.89
USP44-205ENST00000549639 PCDH11YQ9BZA8 1340 aa33.13■■■□□ 2.89
USP44-205ENST00000549639 PRIM1P49642 420 aaKnown RBP33.12■■■□□ 2.89
USP44-205ENST00000549639 SLC27A3Q5K4L6 730 aa33.11■■■□□ 2.89
USP44-205ENST00000549639 SYTL4Q96C24 671 aaPredicted RBP33.11■■■□□ 2.89
USP44-205ENST00000549639 DOT1LQ8TEK3 1739 aa33.09■■■□□ 2.89
USP44-205ENST00000549639 KNSTRNQ9Y448 316 aa33.09■■■□□ 2.89
USP44-205ENST00000549639 TNNT2P45379 298 aaPredicted RBP33.08■■■□□ 2.89
USP44-205ENST00000549639 CASZ1Q86V15 1759 aa33.07■■■□□ 2.88
USP44-205ENST00000549639 EYA1Q99502 592 aa33.06■■■□□ 2.88
USP44-205ENST00000549639 KIF7Q2M1P5 1343 aa33.05■■■□□ 2.88
USP44-205ENST00000549639 PAPPAQ13219 1627 aa33.05■■■□□ 2.88
USP44-205ENST00000549639 MORC1Q86VD1 984 aa33.04■■■□□ 2.88
USP44-205ENST00000549639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.04■■■□□ 2.88
USP44-205ENST00000549639 PPP1R1BQ9UD71 204 aaPredicted RBP33.03■■■□□ 2.88
USP44-205ENST00000549639 SPG7Q9UQ90 795 aa33.03■■■□□ 2.88
USP44-205ENST00000549639 PLEKHG2Q9H7P9 1386 aa33.03■■■□□ 2.88
USP44-205ENST00000549639 PKD1L3Q7Z443 1732 aa33.02■■■□□ 2.88
USP44-205ENST00000549639 LRRC4BQ9NT99 713 aa33.02■■■□□ 2.88
USP44-205ENST00000549639 EIF4A2Q14240 407 aaKnown RBP33.01■■■□□ 2.87
USP44-205ENST00000549639 CYP27B1O15528 508 aa33■■■□□ 2.87
USP44-205ENST00000549639 HMGB2P26583 209 aaKnown RBP32.99■■■□□ 2.87
USP44-205ENST00000549639 PDGFDQ9GZP0 370 aaPredicted RBP32.98■■■□□ 2.87
USP44-205ENST00000549639 LY75O60449 1722 aa32.97■■■□□ 2.87
USP44-205ENST00000549639 NKX1-1Q15270 411 aaPredicted RBP32.96■■■□□ 2.87
USP44-205ENST00000549639 ZBTB7AO95365 584 aa32.95■■■□□ 2.87
USP44-205ENST00000549639 AKT1S1Q96B36 256 aa32.95■■■□□ 2.87
USP44-205ENST00000549639 MTFR1LQ9H019 292 aa32.95■■■□□ 2.87
USP44-205ENST00000549639 ZNF827Q17R98 1081 aa32.94■■■□□ 2.86
USP44-205ENST00000549639 AMER1Q5JTC6 1135 aaPredicted RBP32.94■■■□□ 2.86
USP44-205ENST00000549639 IGSF1Q8N6C5 1336 aa32.94■■■□□ 2.86
USP44-205ENST00000549639 CCNL1Q9UK58 526 aaPredicted RBP32.92■■■□□ 2.86
USP44-205ENST00000549639 IFNL2Q8IZJ0 200 aa32.91■■■□□ 2.86
USP44-205ENST00000549639 MPRIPQ6WCQ1 1025 aa32.9■■■□□ 2.86
USP44-205ENST00000549639 PTGER2P43116 358 aa32.89■■■□□ 2.86
USP44-205ENST00000549639 ATF5Q9Y2D1 282 aaPredicted RBP32.89■■■□□ 2.86
USP44-205ENST00000549639 QSER1Q2KHR3 1735 aa32.88■■■□□ 2.85
USP44-205ENST00000549639 PER1O15534 1290 aaPredicted RBP32.88■■■□□ 2.85
USP44-205ENST00000549639 SLC16A10Q8TF71 515 aa32.88■■■□□ 2.85
USP44-205ENST00000549639 SMARCC1Q92922 1105 aaPredicted RBP32.88■■■□□ 2.85
USP44-205ENST00000549639 TFCP2L1Q9NZI6 479 aa32.87■■■□□ 2.85
USP44-205ENST00000549639 PHKG2P15735 406 aa32.86■■■□□ 2.85
USP44-205ENST00000549639 PALLDQ8WX93 1383 aa32.85■■■□□ 2.85
USP44-205ENST00000549639 TOGARAM1Q9Y4F4 1720 aa32.85■■■□□ 2.85
USP44-205ENST00000549639 ITGB4P16144 1822 aa32.84■■■□□ 2.85
USP44-205ENST00000549639 KCNQ4P56696 695 aa32.84■■■□□ 2.85
USP44-205ENST00000549639 AMOTQ4VCS5 1084 aa32.83■■■□□ 2.85
USP44-205ENST00000549639 PLEKHO1Q53GL0 409 aaPredicted RBP32.82■■■□□ 2.84
USP44-205ENST00000549639 SGIP1Q9BQI5 828 aa32.82■■■□□ 2.84
USP44-205ENST00000549639 PNPLA7Q6ZV29 1317 aa32.81■■■□□ 2.84
USP44-205ENST00000549639 PIGBQ92521 554 aa32.81■■■□□ 2.84
USP44-205ENST00000549639 NPC1L1Q9UHC9 1359 aa32.81■■■□□ 2.84
USP44-205ENST00000549639 DCAF8L1A6NGE4 600 aa32.8■■■□□ 2.84
USP44-205ENST00000549639 HSP90AB1P08238 724 aaKnown RBP32.8■■■□□ 2.84
USP44-205ENST00000549639 TMOD3Q9NYL9 352 aa32.8■■■□□ 2.84
USP44-205ENST00000549639 IL13P35225 146 aa32.77■■■□□ 2.84
USP44-205ENST00000549639 KDRP35968 1356 aa32.76■■■□□ 2.83
USP44-205ENST00000549639 C5P01031 1676 aa32.75■■■□□ 2.83
USP44-205ENST00000549639 MTHFSP49914 203 aa32.75■■■□□ 2.83
USP44-205ENST00000549639 DCAF5Q96JK2 942 aa32.75■■■□□ 2.83
USP44-205ENST00000549639 ARXQ96QS3 562 aa32.75■■■□□ 2.83
USP44-205ENST00000549639 ERVV-2B6SEH9 535 aa32.74■■■□□ 2.83
USP44-205ENST00000549639 CC2D1BQ5T0F9 858 aaKnown RBP32.74■■■□□ 2.83
USP44-205ENST00000549639 SULT6B1Q6IMI4 303 aa32.74■■■□□ 2.83
USP44-205ENST00000549639 FLAD1Q8NFF5 587 aa32.74■■■□□ 2.83
USP44-205ENST00000549639 TUBGCP6Q96RT7 1819 aa32.74■■■□□ 2.83
USP44-205ENST00000549639 POLD1P28340 1107 aa32.73■■■□□ 2.83
USP44-205ENST00000549639 ZNF530Q6P9A1 599 aaPredicted RBP32.72■■■□□ 2.83
USP44-205ENST00000549639 AEBP1Q8IUX7 1158 aa32.72■■■□□ 2.83
USP44-205ENST00000549639 FHDC1Q9C0D6 1143 aaPredicted RBP32.71■■■□□ 2.83
USP44-205ENST00000549639 TAF1LQ8IZX4 1826 aa32.71■■■□□ 2.83
USP44-205ENST00000549639 SYT17Q9BSW7 474 aa32.7■■■□□ 2.83
USP44-205ENST00000549639 MAP3K5Q99683 1374 aa32.7■■■□□ 2.82
USP44-205ENST00000549639 COL24A1Q17RW2 1714 aa32.69■■■□□ 2.82
USP44-205ENST00000549639 LOC102724428A0A0B4J2F2 783 aa32.69■■■□□ 2.82
USP44-205ENST00000549639 SIK1P57059 783 aa32.69■■■□□ 2.82
USP44-205ENST00000549639 C1orf141Q5JVX7 400 aa32.69■■■□□ 2.82
USP44-205ENST00000549639 COL23A1Q86Y22 540 aaPredicted RBP32.67■■■□□ 2.82
USP44-205ENST00000549639 ASAP1Q9ULH1 1129 aa32.67■■■□□ 2.82
USP44-205ENST00000549639 MSH5O43196 834 aa32.66■■■□□ 2.82
USP44-205ENST00000549639 AK7Q96M32 723 aa32.66■■■□□ 2.82
USP44-205ENST00000549639 DIAPH1O60610 1272 aaKnown RBP32.65■■■□□ 2.82
USP44-205ENST00000549639 ATG3Q9NT62 314 aa32.65■■■□□ 2.82
USP44-205ENST00000549639 C4BP0C0L5 1744 aa32.65■■■□□ 2.82
USP44-205ENST00000549639 KDM6AO15550 1401 aaPredicted RBP32.62■■■□□ 2.81
USP44-205ENST00000549639 CABP4P57796 275 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms