RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 SLKQ9H2G2 1235 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 MLH3Q9UHC1 1453 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 ZPR1O75312 459 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 CCDC73Q6ZRK6 1079 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 JMYQ8N9B5 988 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 ACEP12821 1306 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 PIK3R4Q99570 1358 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 ARHGAP45Q92619 1136 aa11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-216ENST00000549396 BECN2A8MW95 431 aa11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 PPP4R3BQ5MIZ7 849 aa11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 WASF1Q92558 559 aa11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 FLT4P35916 1363 aa11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 NAT10Q9H0A0 1025 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 TMOD2Q9NZR1 351 aa11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 PLEKHH1Q9ULM0 1364 aa11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 NPATQ14207 1427 aa11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 KIF1BPQ96EK5 621 aa11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 YTHDC2Q9H6S0 1430 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-216ENST00000549396 IPO7O95373 1038 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 RRS1Q15050 365 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 CCDC70Q6NSX1 233 aa11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 ARHGEF10O15013 1369 aa11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 TXLNAP40222 546 aa11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 LNPKQ9C0E8 428 aa11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 IFIT1P09914 478 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
PPFIA2-216ENST00000549396 MBD3O95983 291 aa11.05□□□□□ -0.64
PPFIA2-216ENST00000549396 KCNA6P17658 529 aa11.05□□□□□ -0.64
PPFIA2-216ENST00000549396 MCTP1Q6DN14 999 aa11.05□□□□□ -0.64
PPFIA2-216ENST00000549396 TRIM22Q8IYM9 498 aa11.05□□□□□ -0.64
PPFIA2-216ENST00000549396 NME9Q86XW9 330 aa11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 LRRC59Q96AG4 307 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 EDC4Q6P2E9 1401 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 GLRX3O76003 335 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 ZC3H6P61129 1189 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 CAVIN4Q5BKX8 364 aa11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 PPP1R42Q7Z4L9 355 aa11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 NLRP1Q9C000 1473 aa11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 PTPRKQ15262 1439 aa11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 WDHD1O75717 1129 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 CYP46A1Q9Y6A2 500 aa11.04□□□□□ -0.64
PPFIA2-216ENST00000549396 PREX2Q70Z35 1606 aa11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 AKAP4Q5JQC9 854 aa11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 SNRPA1P09661 255 aaKnown RBP11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 SHROOM2Q13796 1616 aa11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 PZPP20742 1482 aa11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 ANKRD24Q8TF21 1146 aa11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 CDC5LQ99459 802 aaKnown RBP11.03□□□□□ -0.64
PPFIA2-216ENST00000549396 GOLGA6L1Q8N7Z2 621 aa11.02□□□□□ -0.64
PPFIA2-216ENST00000549396 SLC5A1P13866 664 aa11.02□□□□□ -0.65
PPFIA2-216ENST00000549396 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
PPFIA2-216ENST00000549396 NOL7Q9UMY1 257 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-216ENST00000549396 PDZRN3Q9UPQ7 1066 aa11.02□□□□□ -0.65
PPFIA2-216ENST00000549396 CHD1LQ86WJ1 897 aa11.02□□□□□ -0.65
PPFIA2-216ENST00000549396 CIZ1Q9ULV3 898 aaPredicted RBP11.02□□□□□ -0.65
PPFIA2-216ENST00000549396 HECW2Q9P2P5 1572 aa11.02□□□□□ -0.65
PPFIA2-216ENST00000549396 DNAAF4Q8WXU2 420 aa11.02□□□□□ -0.65
PPFIA2-216ENST00000549396 LDHCP07864 332 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 NAP1L5Q96NT1 182 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 DACH1Q9UI36 760 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 FOXO3O43524 673 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 ALDH1L1O75891 902 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 CCDC178Q5BJE1 867 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 SPTY2D1Q68D10 685 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 SASS6Q6UVJ0 657 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 OLFM4Q6UX06 510 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 TXLNBQ8N3L3 684 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 BICD2Q8TD16 824 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 NOC3LQ8WTT2 800 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 DNAJC2Q99543 621 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 MAGI3Q5TCQ9 1506 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 SRGAP3O43295 1099 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 NOL8Q76FK4 1167 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 DISP3Q9P2K9 1392 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 COL17A1Q9UMD9 1497 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 CHD1O14646 1710 aa11.01□□□□□ -0.65
PPFIA2-216ENST00000549396 SBNO2Q9Y2G9 1366 aa11□□□□□ -0.65
PPFIA2-216ENST00000549396 ANKRD18BA2A2Z9 1011 aa11□□□□□ -0.65
PPFIA2-216ENST00000549396 TRAF1Q13077 416 aa11□□□□□ -0.65
PPFIA2-216ENST00000549396 WWC2Q6AWC2 1192 aa11□□□□□ -0.65
PPFIA2-216ENST00000549396 TMEM2Q9UHN6 1383 aa11□□□□□ -0.65
PPFIA2-216ENST00000549396 TSR2Q969E8 191 aaKnown RBP11□□□□□ -0.65
PPFIA2-216ENST00000549396 RNF41Q9H4P4 317 aaPredicted RBP11□□□□□ -0.65
PPFIA2-216ENST00000549396 MYOM2P54296 1465 aa11□□□□□ -0.65
PPFIA2-216ENST00000549396 PARD3Q8TEW0 1356 aa11□□□□□ -0.65
PPFIA2-216ENST00000549396 ZCRB1Q8TBF4 217 aaKnown RBP10.99□□□□□ -0.65
PPFIA2-216ENST00000549396 CCDC69A6NI79 296 aa10.99□□□□□ -0.65
PPFIA2-216ENST00000549396 IFIT5Q13325 482 aaKnown RBP10.99□□□□□ -0.65
PPFIA2-216ENST00000549396 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
PPFIA2-216ENST00000549396 ADCY10Q96PN6 1610 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms