RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 PSME1Q06323 249 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 PHTF2Q8N3S3 785 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 TPCN2Q8NHX9 752 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 SEPT3Q9UH03 358 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 TTBK1Q5TCY1 1321 aaPredicted RBP5.81□□□□□ -1.48
APAF1-208ENST00000549007 PLEKHM2Q8IWE5 1019 aa5.81□□□□□ -1.48
APAF1-208ENST00000549007 ARHGAP9Q9BRR9 750 aa5.81□□□□□ -1.48
APAF1-208ENST00000549007 H3BRB1 525 aa5.81□□□□□ -1.48
APAF1-208ENST00000549007 ARID4AP29374 1257 aaPredicted RBP5.81□□□□□ -1.48
APAF1-208ENST00000549007 TRAF7Q6Q0C0 670 aa5.81□□□□□ -1.48
APAF1-208ENST00000549007 LAPTM4BQ86VI4 370 aa5.81□□□□□ -1.48
APAF1-208ENST00000549007 TUT1Q9H6E5 874 aaKnown RBP5.81□□□□□ -1.48
APAF1-208ENST00000549007 AMOTL2Q9Y2J4 779 aa5.81□□□□□ -1.48
APAF1-208ENST00000549007 GIGYF1O75420 1035 aaPredicted RBP5.8□□□□□ -1.48
APAF1-208ENST00000549007 MARSP56192 900 aaKnown RBP5.8□□□□□ -1.48
APAF1-208ENST00000549007 ANKRD13DQ6ZTN6 518 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 NFATC2IPQ8NCF5 419 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 SPSB2Q99619 263 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 BCL2L13Q9BXK5 485 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 ZNF16P17020 682 aaPredicted RBP5.8□□□□□ -1.48
APAF1-208ENST00000549007 ZBTB33Q86T24 672 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 EVA1BQ9NVM1 165 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 DNAAF2Q9NVR5 837 aaKnown RBP5.8□□□□□ -1.48
APAF1-208ENST00000549007 ATP5J2-PTCD1G3V325 749 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 AGERQ15109 404 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 EML3Q32P44 896 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 B4GALNT3Q6L9W6 998 aa5.8□□□□□ -1.48
APAF1-208ENST00000549007 ANKRD33BA6NCL7 494 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 PTK2Q05397 1052 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 CLP1Q92989 425 aaKnown RBP5.79□□□□□ -1.48
APAF1-208ENST00000549007 UNC93B1Q9H1C4 597 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 NUP160Q12769 1436 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 GOLGA8CPA6NN73 597 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 GTF2IP78347 998 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 ZNF687Q8N1G0 1237 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 ANKK1Q8NFD2 765 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 HS3ST6Q96QI5 342 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 DOLKQ9UPQ8 538 aa5.79□□□□□ -1.48
APAF1-208ENST00000549007 TSEN2Q8NCE0 465 aaKnown RBP5.79□□□□□ -1.48
APAF1-208ENST00000549007 SOWAHBA6NEL2 793 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 FOXJ1Q92949 421 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 HINFPQ9BQA5 517 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 ZBTB7BO15156 539 aaPredicted RBP5.78□□□□□ -1.48
APAF1-208ENST00000549007 DKK1O94907 266 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 LSM11P83369 360 aaKnown RBP eCLIP5.78□□□□□ -1.481e-8■■■■■ 91.9
APAF1-208ENST00000549007 NAA30Q147X3 362 aaPredicted RBP5.78□□□□□ -1.48
APAF1-208ENST00000549007 OCLNQ16625 522 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 C4orf48Q5BLP8 95 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 CCDC102BQ68D86 513 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 DZIP3Q86Y13 1208 aaKnown RBP5.78□□□□□ -1.48
APAF1-208ENST00000549007 ERCC6L2Q5T890 1561 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 CLASP1Q7Z460 1538 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 GOLGA3Q08378 1498 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 NR1I2O75469 434 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 DXOO77932 396 aaKnown RBP5.78□□□□□ -1.48
APAF1-208ENST00000549007 PDXDC2PQ6P474 469 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 WNT2BQ93097 391 aa5.78□□□□□ -1.48
APAF1-208ENST00000549007 KIF21BO75037 1637 aa5.77□□□□□ -1.48
APAF1-208ENST00000549007 RBM47A0AV96 593 aaKnown RBP5.77□□□□□ -1.49
APAF1-208ENST00000549007 HRO43593 1189 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 BAP1Q92560 729 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 ZNF516Q92618 1163 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 NOD1Q9Y239 953 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 KIAA0586Q9BVV6 1533 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 PBX2P40425 430 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 NBPF14Q5TI25 921 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 TSR3Q9UJK0 312 aaKnown RBP5.76□□□□□ -1.49
APAF1-208ENST00000549007 PRG4Q92954 1404 aaPredicted RBP5.76□□□□□ -1.49
APAF1-208ENST00000549007 ERFEQ4G0M1 354 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 SH3BP5LQ7L8J4 393 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 NPAS4Q8IUM7 802 aa5.76□□□□□ -1.49
APAF1-208ENST00000549007 SALL2Q9Y467 1007 aaPredicted RBP5.76□□□□□ -1.49
APAF1-208ENST00000549007 IQGAP2Q13576 1575 aa5.75□□□□□ -1.49
APAF1-208ENST00000549007 SCTRP47872 440 aa5.75□□□□□ -1.49
APAF1-208ENST00000549007 GLYCTKQ8IVS8 523 aa5.75□□□□□ -1.49
APAF1-208ENST00000549007 GTF3C2Q8WUA4 911 aaPredicted RBP5.75□□□□□ -1.49
APAF1-208ENST00000549007 PCDHB11Q9Y5F2 797 aa5.75□□□□□ -1.49
APAF1-208ENST00000549007 DNMT3AQ9Y6K1 912 aaPredicted RBP5.75□□□□□ -1.49
APAF1-208ENST00000549007 FKBP5Q13451 457 aaPredicted RBP5.75□□□□□ -1.49
APAF1-208ENST00000549007 CXXC1Q9P0U4 656 aaPredicted RBP5.75□□□□□ -1.49
APAF1-208ENST00000549007 ARHGEF11O15085 1522 aa5.75□□□□□ -1.49
APAF1-208ENST00000549007 ZC3H4Q9UPT8 1303 aaKnown RBP5.74□□□□□ -1.49
APAF1-208ENST00000549007 SEC13P55735 322 aa5.74□□□□□ -1.49
APAF1-208ENST00000549007 NKX2-3Q8TAU0 364 aa5.74□□□□□ -1.49
APAF1-208ENST00000549007 CTTNBP2Q8WZ74 1663 aa5.74□□□□□ -1.49
APAF1-208ENST00000549007 MAPK1P28482 360 aa5.74□□□□□ -1.49
APAF1-208ENST00000549007 CYB5RLQ6IPT4 315 aa5.74□□□□□ -1.49
APAF1-208ENST00000549007 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.74□□□□□ -1.49
APAF1-208ENST00000549007 PRR14Q9BWN1 585 aa5.74□□□□□ -1.49
APAF1-208ENST00000549007 MMP16P51512 607 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 SWI5Q1ZZU3 235 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 FAM163AQ96GL9 167 aaPredicted RBP5.73□□□□□ -1.49
APAF1-208ENST00000549007 CHIC2Q9UKJ5 165 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 PCDHGA11Q9Y5H2 935 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 RIMBP3CA6NJZ7 1639 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 RIMBP3BA6NNM3 1639 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 RIMBP3Q9UFD9 1639 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 MSS51Q4VC12 460 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 STAC3Q96MF2 364 aa5.73□□□□□ -1.49
APAF1-208ENST00000549007 IGSF5Q9NSI5 407 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms