RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 DEFB132Q7Z7B7 95 aa15.77■□□□□ 0.12
TUBA1C-203ENST00000548470 DDX54Q8TDD1 881 aaKnown RBP15.77■□□□□ 0.12
TUBA1C-203ENST00000548470 LRRC37A3O60309 1634 aa15.76■□□□□ 0.11
TUBA1C-203ENST00000548470 MTHFSP49914 203 aa15.76■□□□□ 0.11
TUBA1C-203ENST00000548470 CAMKK2Q96RR4 588 aa15.76■□□□□ 0.11
TUBA1C-203ENST00000548470 SPG7Q9UQ90 795 aa15.76■□□□□ 0.11
TUBA1C-203ENST00000548470 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
TUBA1C-203ENST00000548470 PEAK1Q9H792 1746 aa15.75■□□□□ 0.11
TUBA1C-203ENST00000548470 EN1Q05925 392 aaPredicted RBP15.75■□□□□ 0.11
TUBA1C-203ENST00000548470 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
TUBA1C-203ENST00000548470 EP400Q96L91 3159 aa15.74■□□□□ 0.11
TUBA1C-203ENST00000548470 RGPD1P0DJD0 1748 aa15.74■□□□□ 0.11
TUBA1C-203ENST00000548470 IGSF1Q8N6C5 1336 aa15.73■□□□□ 0.11
TUBA1C-203ENST00000548470 PCDH11XQ9BZA7 1347 aa15.73■□□□□ 0.11
TUBA1C-203ENST00000548470 PCDH11YQ9BZA8 1340 aa15.73■□□□□ 0.11
TUBA1C-203ENST00000548470 IL13P35225 146 aa15.72■□□□□ 0.11
TUBA1C-203ENST00000548470 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
TUBA1C-203ENST00000548470 WNK3Q9BYP7 1800 aa15.72■□□□□ 0.11
TUBA1C-203ENST00000548470 DIAPH1O60610 1272 aaKnown RBP15.71■□□□□ 0.11
TUBA1C-203ENST00000548470 HMGB2P26583 209 aaKnown RBP15.71■□□□□ 0.11
TUBA1C-203ENST00000548470 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
TUBA1C-203ENST00000548470 MRS2Q9HD23 443 aa15.71■□□□□ 0.11
TUBA1C-203ENST00000548470 MEGF6O75095 1541 aa15.71■□□□□ 0.11
TUBA1C-203ENST00000548470 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
TUBA1C-203ENST00000548470 NKX1-1Q15270 411 aaPredicted RBP15.7■□□□□ 0.1
TUBA1C-203ENST00000548470 NBPF14Q5TI25 921 aa15.7■□□□□ 0.1
TUBA1C-203ENST00000548470 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
TUBA1C-203ENST00000548470 PLEKHO1Q53GL0 409 aaPredicted RBP15.69■□□□□ 0.1
TUBA1C-203ENST00000548470 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
TUBA1C-203ENST00000548470 KCNQ2O43526 872 aa15.68■□□□□ 0.1
TUBA1C-203ENST00000548470 IFNL2Q8IZJ0 200 aa15.68■□□□□ 0.1
TUBA1C-203ENST00000548470 ACSBG1Q96GR2 724 aa15.68■□□□□ 0.1
TUBA1C-203ENST00000548470 CYP27B1O15528 508 aa15.67■□□□□ 0.1
TUBA1C-203ENST00000548470 HSP90AB1P08238 724 aaKnown RBP15.67■□□□□ 0.1
TUBA1C-203ENST00000548470 PRIM1P49642 420 aaKnown RBP15.67■□□□□ 0.1
TUBA1C-203ENST00000548470 SULT6B1Q6IMI4 303 aa15.67■□□□□ 0.1
TUBA1C-203ENST00000548470 KDRP35968 1356 aa15.66■□□□□ 0.1
TUBA1C-203ENST00000548470 NUDCQ9Y266 331 aa15.66■□□□□ 0.1
TUBA1C-203ENST00000548470 PTF1AQ7RTS3 328 aa15.65■□□□□ 0.1
TUBA1C-203ENST00000548470 TNS1Q9HBL0 1735 aaKnown RBP15.65■□□□□ 0.1
TUBA1C-203ENST00000548470 PHKG2P15735 406 aa15.64■□□□□ 0.09
TUBA1C-203ENST00000548470 TXNRD1Q16881 649 aa15.64■□□□□ 0.09
TUBA1C-203ENST00000548470 SLC27A3Q5K4L6 730 aa15.64■□□□□ 0.09
TUBA1C-203ENST00000548470 SYTL4Q96C24 671 aaPredicted RBP15.64■□□□□ 0.09
TUBA1C-203ENST00000548470 PROM2Q8N271 834 aa15.63■□□□□ 0.09
TUBA1C-203ENST00000548470 RGPD2P0DJD1 1756 aa15.62■□□□□ 0.09
TUBA1C-203ENST00000548470 DCAF5Q96JK2 942 aa15.62■□□□□ 0.09
TUBA1C-203ENST00000548470 ERVV-2B6SEH9 535 aa15.61■□□□□ 0.09
TUBA1C-203ENST00000548470 C1orf141Q5JVX7 400 aa15.61■□□□□ 0.09
TUBA1C-203ENST00000548470 AEBP1Q8IUX7 1158 aa15.61■□□□□ 0.09
TUBA1C-203ENST00000548470 FAM9BQ8IZU0 186 aa15.61■□□□□ 0.09
TUBA1C-203ENST00000548470 SMARCC1Q92922 1105 aaPredicted RBP15.61■□□□□ 0.09
TUBA1C-203ENST00000548470 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
TUBA1C-203ENST00000548470 ZNF530Q6P9A1 599 aaPredicted RBP15.6■□□□□ 0.09
TUBA1C-203ENST00000548470 PNISRQ8TF01 805 aaKnown RBP15.6■□□□□ 0.09
TUBA1C-203ENST00000548470 RGPD3A6NKT7 1758 aaPredicted RBP15.59■□□□□ 0.09
TUBA1C-203ENST00000548470 RGPD4Q7Z3J3 1758 aa15.59■□□□□ 0.09
TUBA1C-203ENST00000548470 SBF2Q86WG5 1849 aa15.59■□□□□ 0.09
TUBA1C-203ENST00000548470 U2SURPO15042 1029 aaKnown RBP15.59■□□□□ 0.09
TUBA1C-203ENST00000548470 R3HDM1Q15032 1099 aaKnown RBP15.59■□□□□ 0.09
TUBA1C-203ENST00000548470 AKAP4Q5JQC9 854 aa15.59■□□□□ 0.09
TUBA1C-203ENST00000548470 YTHDC1Q96MU7 727 aaKnown RBP15.59■□□□□ 0.09
TUBA1C-203ENST00000548470 PKD1L3Q7Z443 1732 aa15.58■□□□□ 0.08
TUBA1C-203ENST00000548470 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
TUBA1C-203ENST00000548470 FCHSD2O94868 740 aa15.58■□□□□ 0.08
TUBA1C-203ENST00000548470 HMOX1P09601 288 aa15.58■□□□□ 0.08
TUBA1C-203ENST00000548470 MPRIPQ6WCQ1 1025 aa15.58■□□□□ 0.08
TUBA1C-203ENST00000548470 STK32BQ9NY57 414 aa15.58■□□□□ 0.08
TUBA1C-203ENST00000548470 TMOD3Q9NYL9 352 aa15.58■□□□□ 0.08
TUBA1C-203ENST00000548470 SLC15A2Q16348 729 aa15.56■□□□□ 0.08
TUBA1C-203ENST00000548470 PIGBQ92521 554 aa15.56■□□□□ 0.08
TUBA1C-203ENST00000548470 PNNQ9H307 717 aaKnown RBP15.56■□□□□ 0.08
TUBA1C-203ENST00000548470 SHANK3Q9BYB0 1731 aa15.55■□□□□ 0.08
TUBA1C-203ENST00000548470 PSDA5PKW4 1024 aaPredicted RBP15.55■□□□□ 0.08
TUBA1C-203ENST00000548470 GAS2L2Q8NHY3 880 aa15.55■□□□□ 0.08
TUBA1C-203ENST00000548470 RREB1Q92766 1687 aa15.54■□□□□ 0.08
TUBA1C-203ENST00000548470 U2AF1L5P0DN76 240 aaPredicted RBP15.54■□□□□ 0.08
TUBA1C-203ENST00000548470 CABP4P57796 275 aa15.54■□□□□ 0.08
TUBA1C-203ENST00000548470 U2AF1Q01081 240 aaKnown RBP eCLIP15.54■□□□□ 0.08
TUBA1C-203ENST00000548470 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
TUBA1C-203ENST00000548470 LRRC4BQ9NT99 713 aa15.54■□□□□ 0.08
TUBA1C-203ENST00000548470 CCNL1Q9UK58 526 aaPredicted RBP15.54■□□□□ 0.08
TUBA1C-203ENST00000548470 ADAMTS8Q9UP79 889 aa15.54■□□□□ 0.08
TUBA1C-203ENST00000548470 MTHFSDQ2M296 383 aaKnown RBP15.53■□□□□ 0.08
TUBA1C-203ENST00000548470 NEFMP07197 916 aa15.52■□□□□ 0.08
TUBA1C-203ENST00000548470 CCDC146Q8IYE0 955 aa15.52■□□□□ 0.08
TUBA1C-203ENST00000548470 RSPH6AQ9H0K4 717 aa15.52■□□□□ 0.08
TUBA1C-203ENST00000548470 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
TUBA1C-203ENST00000548470 GNAT3A8MTJ3 354 aa15.5■□□□□ 0.07
TUBA1C-203ENST00000548470 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
TUBA1C-203ENST00000548470 AKT1S1Q96B36 256 aa15.5■□□□□ 0.07
TUBA1C-203ENST00000548470 ANO8Q9HCE9 1232 aaPredicted RBP15.5■□□□□ 0.07
TUBA1C-203ENST00000548470 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
TUBA1C-203ENST00000548470 BTAF1O14981 1849 aa15.5■□□□□ 0.07
TUBA1C-203ENST00000548470 NUP188Q5SRE5 1749 aa15.49■□□□□ 0.07
TUBA1C-203ENST00000548470 DOT1LQ8TEK3 1739 aa15.49■□□□□ 0.07
TUBA1C-203ENST00000548470 LOC102724428A0A0B4J2F2 783 aa15.49■□□□□ 0.07
TUBA1C-203ENST00000548470 RNMTO43148 476 aaKnown RBP15.49■□□□□ 0.07
TUBA1C-203ENST00000548470 HTATSF1O43719 755 aaKnown RBP15.49■□□□□ 0.07
TUBA1C-203ENST00000548470 SIK1P57059 783 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms