RNA–Protein interactions for RNA: ENST00000548391.1

PRAMENP-203, Transcript of PRAME N-terminal-like, pseudogene, humanhuman

BASIC

Gene PRAMENP, Length 1,445 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMENP-203ENST00000548391 SHANK3Q9BYB0 1731 aa16.3■□□□□ 0.2
PRAMENP-203ENST00000548391 BTAF1O14981 1849 aa16.3■□□□□ 0.2
PRAMENP-203ENST00000548391 MAP2P11137 1827 aaKnown RBP16.3■□□□□ 0.2
PRAMENP-203ENST00000548391 ANKRD26Q9UPS8 1709 aa16.29■□□□□ 0.2
PRAMENP-203ENST00000548391 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
PRAMENP-203ENST00000548391 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
PRAMENP-203ENST00000548391 POLKQ9UBT6 870 aa16.28■□□□□ 0.2
PRAMENP-203ENST00000548391 WASHC2AQ641Q2 1341 aa16.28■□□□□ 0.2
PRAMENP-203ENST00000548391 TATP17735 454 aaPredicted RBP16.27■□□□□ 0.19
PRAMENP-203ENST00000548391 PRIM1P49642 420 aaKnown RBP16.27■□□□□ 0.19
PRAMENP-203ENST00000548391 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
PRAMENP-203ENST00000548391 SLC15A2Q16348 729 aa16.26■□□□□ 0.19
PRAMENP-203ENST00000548391 STK32BQ9NY57 414 aa16.26■□□□□ 0.19
PRAMENP-203ENST00000548391 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
PRAMENP-203ENST00000548391 SYTL4Q96C24 671 aaPredicted RBP16.25■□□□□ 0.19
PRAMENP-203ENST00000548391 PDGFDQ9GZP0 370 aaPredicted RBP16.25■□□□□ 0.19
PRAMENP-203ENST00000548391 SPON1Q9HCB6 807 aa16.25■□□□□ 0.19
PRAMENP-203ENST00000548391 DOT1LQ8TEK3 1739 aa16.24■□□□□ 0.19
PRAMENP-203ENST00000548391 CASZ1Q86V15 1759 aa16.24■□□□□ 0.19
PRAMENP-203ENST00000548391 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
PRAMENP-203ENST00000548391 NSD2O96028 1365 aa16.24■□□□□ 0.19
PRAMENP-203ENST00000548391 EYA1Q99502 592 aa16.23■□□□□ 0.19
PRAMENP-203ENST00000548391 PCDH11XQ9BZA7 1347 aa16.23■□□□□ 0.19
PRAMENP-203ENST00000548391 PCDH11YQ9BZA8 1340 aa16.23■□□□□ 0.19
PRAMENP-203ENST00000548391 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
PRAMENP-203ENST00000548391 KIF7Q2M1P5 1343 aa16.22■□□□□ 0.19
PRAMENP-203ENST00000548391 CYP27B1O15528 508 aa16.21■□□□□ 0.19
PRAMENP-203ENST00000548391 SLC27A3Q5K4L6 730 aa16.21■□□□□ 0.19
PRAMENP-203ENST00000548391 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
PRAMENP-203ENST00000548391 KNSTRNQ9Y448 316 aa16.2■□□□□ 0.18
PRAMENP-203ENST00000548391 PKD1L3Q7Z443 1732 aa16.2■□□□□ 0.18
PRAMENP-203ENST00000548391 ZBTB7AO95365 584 aa16.19■□□□□ 0.18
PRAMENP-203ENST00000548391 ZNF827Q17R98 1081 aa16.19■□□□□ 0.18
PRAMENP-203ENST00000548391 MORC1Q86VD1 984 aa16.19■□□□□ 0.18
PRAMENP-203ENST00000548391 KCNQ4P56696 695 aa16.18■□□□□ 0.18
PRAMENP-203ENST00000548391 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
PRAMENP-203ENST00000548391 AKT1S1Q96B36 256 aa16.18■□□□□ 0.18
PRAMENP-203ENST00000548391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRAMENP-203ENST00000548391 PPP1R1BQ9UD71 204 aaPredicted RBP16.18■□□□□ 0.18
PRAMENP-203ENST00000548391 LY75O60449 1722 aa16.18■□□□□ 0.18
PRAMENP-203ENST00000548391 PTGER2P43116 358 aa16.17■□□□□ 0.18
PRAMENP-203ENST00000548391 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
PRAMENP-203ENST00000548391 SPG7Q9UQ90 795 aa16.17■□□□□ 0.18
PRAMENP-203ENST00000548391 MTFR1LQ9H019 292 aa16.16■□□□□ 0.18
PRAMENP-203ENST00000548391 ATF5Q9Y2D1 282 aaPredicted RBP16.16■□□□□ 0.18
PRAMENP-203ENST00000548391 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
PRAMENP-203ENST00000548391 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
PRAMENP-203ENST00000548391 MPRIPQ6WCQ1 1025 aa16.15■□□□□ 0.18
PRAMENP-203ENST00000548391 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
PRAMENP-203ENST00000548391 TOGARAM1Q9Y4F4 1720 aa16.15■□□□□ 0.18
PRAMENP-203ENST00000548391 ITGB4P16144 1822 aa16.13■□□□□ 0.17
PRAMENP-203ENST00000548391 SGIP1Q9BQI5 828 aa16.13■□□□□ 0.17
PRAMENP-203ENST00000548391 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
PRAMENP-203ENST00000548391 PHKG2P15735 406 aa16.12■□□□□ 0.17
PRAMENP-203ENST00000548391 IFNL2Q8IZJ0 200 aa16.12■□□□□ 0.17
PRAMENP-203ENST00000548391 UTRNP46939 3433 aa16.12■□□□□ 0.17
PRAMENP-203ENST00000548391 PNPLA7Q6ZV29 1317 aa16.12■□□□□ 0.17
PRAMENP-203ENST00000548391 QSER1Q2KHR3 1735 aa16.12■□□□□ 0.17
PRAMENP-203ENST00000548391 PIGBQ92521 554 aa16.11■□□□□ 0.17
PRAMENP-203ENST00000548391 TFCP2L1Q9NZI6 479 aa16.11■□□□□ 0.17
PRAMENP-203ENST00000548391 PALLDQ8WX93 1383 aa16.11■□□□□ 0.17
PRAMENP-203ENST00000548391 SMARCC1Q92922 1105 aaPredicted RBP16.1■□□□□ 0.17
PRAMENP-203ENST00000548391 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
PRAMENP-203ENST00000548391 IL13P35225 146 aa16.09■□□□□ 0.17
PRAMENP-203ENST00000548391 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
PRAMENP-203ENST00000548391 SLC16A10Q8TF71 515 aa16.09■□□□□ 0.17
PRAMENP-203ENST00000548391 MTHFSP49914 203 aa16.08■□□□□ 0.16
PRAMENP-203ENST00000548391 CC2D1BQ5T0F9 858 aaKnown RBP16.08■□□□□ 0.16
PRAMENP-203ENST00000548391 TMOD3Q9NYL9 352 aa16.08■□□□□ 0.16
PRAMENP-203ENST00000548391 C5P01031 1676 aa16.07■□□□□ 0.16
PRAMENP-203ENST00000548391 AMOTQ4VCS5 1084 aa16.07■□□□□ 0.16
PRAMENP-203ENST00000548391 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
PRAMENP-203ENST00000548391 SULT6B1Q6IMI4 303 aa16.07■□□□□ 0.16
PRAMENP-203ENST00000548391 TAF1LQ8IZX4 1826 aa16.06■□□□□ 0.16
PRAMENP-203ENST00000548391 KDRP35968 1356 aa16.06■□□□□ 0.16
PRAMENP-203ENST00000548391 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
PRAMENP-203ENST00000548391 ARXQ96QS3 562 aa16.06■□□□□ 0.16
PRAMENP-203ENST00000548391 SYT17Q9BSW7 474 aa16.06■□□□□ 0.16
PRAMENP-203ENST00000548391 FHDC1Q9C0D6 1143 aaPredicted RBP16.06■□□□□ 0.16
PRAMENP-203ENST00000548391 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
PRAMENP-203ENST00000548391 COL23A1Q86Y22 540 aaPredicted RBP16.05■□□□□ 0.16
PRAMENP-203ENST00000548391 DCAF5Q96JK2 942 aa16.05■□□□□ 0.16
PRAMENP-203ENST00000548391 ASAP1Q9ULH1 1129 aa16.05■□□□□ 0.16
PRAMENP-203ENST00000548391 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
PRAMENP-203ENST00000548391 LOC102724428A0A0B4J2F2 783 aa16.04■□□□□ 0.16
PRAMENP-203ENST00000548391 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
PRAMENP-203ENST00000548391 SIK1P57059 783 aa16.04■□□□□ 0.16
PRAMENP-203ENST00000548391 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
PRAMENP-203ENST00000548391 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
PRAMENP-203ENST00000548391 ATG3Q9NT62 314 aa16.03■□□□□ 0.16
PRAMENP-203ENST00000548391 KDM6AO15550 1401 aaPredicted RBP16.03■□□□□ 0.16
PRAMENP-203ENST00000548391 C4BP0C0L5 1744 aa16.02■□□□□ 0.16
PRAMENP-203ENST00000548391 POLD1P28340 1107 aa16.02■□□□□ 0.15
PRAMENP-203ENST00000548391 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
PRAMENP-203ENST00000548391 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
PRAMENP-203ENST00000548391 MSH5O43196 834 aa16.01■□□□□ 0.15
PRAMENP-203ENST00000548391 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
PRAMENP-203ENST00000548391 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
PRAMENP-203ENST00000548391 LINC00116Q8NCU8 138 aa16.01■□□□□ 0.15
PRAMENP-203ENST00000548391 FLAD1Q8NFF5 587 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms